Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4216

Experiment: LB_plus_SM_buffer with FelixO1_phage 0.5 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF4214 and GFF4215 are separated by 3 nucleotidesGFF4215 and GFF4216 are separated by 157 nucleotidesGFF4216 and GFF4217 are separated by 1 nucleotides GFF4214 - LSU ribosomal protein L1p (L10Ae), at 30,344 to 31,048 GFF4214 GFF4215 - LSU ribosomal protein L11p (L12e), at 31,052 to 31,480 GFF4215 GFF4216 - Transcription antitermination protein NusG, at 31,638 to 32,183 GFF4216 GFF4217 - Preprotein translocase subunit SecE (TC 3.A.5.1.1), at 32,185 to 32,568 GFF4217 Position (kb) 31 32 33Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6at 31.640 kb on - strandat 32.702 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
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31,640 - +4.0
32,702 - +5.9

Or see this region's nucleotide sequence