Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2817

Experiment: LB_plus_SM_buffer with FelixO1_phage 0.5 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2815 and GFF2816 are separated by 170 nucleotidesGFF2816 and GFF2817 are separated by 23 nucleotidesGFF2817 and GFF2818 are separated by 3 nucleotidesGFF2818 and GFF2819 are separated by 121 nucleotides GFF2815 - Protein YcgL, at 336,937 to 337,185 GFF2815 GFF2816 - Septum site-determining protein MinC, at 337,356 to 338,063 GFF2816 GFF2817 - Septum site-determining protein MinD, at 338,087 to 338,899 GFF2817 GFF2818 - Cell division topological specificity factor MinE, at 338,903 to 339,169 GFF2818 GFF2819 - Ribonuclease D (EC 3.1.26.3), at 339,291 to 340,406 GFF2819 Position (kb) 338 339Strain fitness (log2 ratio) -1 0 1at 337.215 kb on - strandat 337.505 kb on + strand, within GFF2816at 339.669 kb on - strand, within GFF2819

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
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337,215 - -0.4
337,505 + GFF2816 0.21 -1.1
339,669 - GFF2819 0.34 -1.2

Or see this region's nucleotide sequence