Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1838

Experiment: LB_plus_SM_buffer with FelixO1_phage 0.5 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF1837 and GFF1838 are separated by 355 nucleotidesGFF1838 and GFF1839 are separated by 112 nucleotides GFF1837 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 26,709 to 27,437 GFF1837 GFF1838 - Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1), at 27,793 to 30,078 GFF1838 GFF1839 - Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1), at 30,191 to 31,321 GFF1839 Position (kb) 27 28 29 30 31Strain fitness (log2 ratio) -1 0 1at 30.099 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
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30,099 + +0.2

Or see this region's nucleotide sequence