Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4254 and EX28DRAFT_4255 are separated by 65 nucleotides EX28DRAFT_4255 and EX28DRAFT_4256 are separated by 0 nucleotides EX28DRAFT_4256 and EX28DRAFT_4257 are separated by 81 nucleotides EX28DRAFT_4257 and EX28DRAFT_4258 are separated by 305 nucleotides
EX28DRAFT_4254: EX28DRAFT_4254 - ribonuclease, at 60,328 to 60,810
_4254
EX28DRAFT_4255: EX28DRAFT_4255 - hypothetical protein, at 60,876 to 61,283
_4255
EX28DRAFT_4256: EX28DRAFT_4256 - hypothetical protein, at 61,284 to 61,574
_4256
EX28DRAFT_4257: EX28DRAFT_4257 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 61,656 to 62,261
_4257
EX28DRAFT_4258: EX28DRAFT_4258 - hypothetical protein, at 62,567 to 63,697
_4258
Position (kb) 61
62
63 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 60.733 kb on + strand, within EX28DRAFT_4254 at 60.775 kb on + strand at 60.776 kb on - strand at 60.776 kb on - strand at 60.776 kb on - strand at 60.776 kb on - strand at 60.783 kb on + strand at 60.784 kb on - strand at 60.808 kb on + strand at 60.809 kb on - strand at 60.809 kb on - strand at 60.830 kb on + strand at 60.830 kb on + strand at 60.875 kb on + strand at 60.875 kb on + strand at 60.876 kb on - strand at 60.876 kb on - strand at 60.889 kb on - strand at 60.998 kb on + strand, within EX28DRAFT_4255 at 60.999 kb on - strand, within EX28DRAFT_4255 at 60.999 kb on - strand, within EX28DRAFT_4255 at 61.010 kb on + strand, within EX28DRAFT_4255 at 61.079 kb on - strand, within EX28DRAFT_4255 at 61.119 kb on - strand, within EX28DRAFT_4255 at 61.136 kb on + strand, within EX28DRAFT_4255 at 61.137 kb on - strand, within EX28DRAFT_4255 at 61.295 kb on - strand at 61.369 kb on - strand, within EX28DRAFT_4256 at 61.662 kb on - strand at 61.669 kb on + strand at 61.740 kb on + strand, within EX28DRAFT_4257 at 61.740 kb on + strand, within EX28DRAFT_4257 at 61.741 kb on - strand, within EX28DRAFT_4257 at 61.846 kb on + strand, within EX28DRAFT_4257 at 61.933 kb on - strand, within EX28DRAFT_4257 at 61.933 kb on - strand, within EX28DRAFT_4257 at 61.968 kb on - strand, within EX28DRAFT_4257 at 62.007 kb on + strand, within EX28DRAFT_4257 at 62.072 kb on + strand, within EX28DRAFT_4257 at 62.114 kb on + strand, within EX28DRAFT_4257 at 62.130 kb on - strand, within EX28DRAFT_4257 at 62.383 kb on + strand at 62.423 kb on + strand at 62.512 kb on - strand at 62.629 kb on + strand at 62.634 kb on - strand at 62.830 kb on + strand, within EX28DRAFT_4258 at 62.834 kb on - strand, within EX28DRAFT_4258 at 62.882 kb on + strand, within EX28DRAFT_4258 at 62.954 kb on + strand, within EX28DRAFT_4258 at 62.955 kb on - strand, within EX28DRAFT_4258 at 62.955 kb on - strand, within EX28DRAFT_4258 at 62.960 kb on + strand, within EX28DRAFT_4258 at 62.960 kb on + strand, within EX28DRAFT_4258 at 62.961 kb on - strand, within EX28DRAFT_4258 at 62.972 kb on - strand, within EX28DRAFT_4258 at 63.076 kb on + strand, within EX28DRAFT_4258 at 63.077 kb on - strand, within EX28DRAFT_4258 at 63.085 kb on + strand, within EX28DRAFT_4258 at 63.085 kb on + strand, within EX28DRAFT_4258 at 63.086 kb on - strand, within EX28DRAFT_4258 at 63.086 kb on - strand, within EX28DRAFT_4258 at 63.086 kb on - strand, within EX28DRAFT_4258 at 63.120 kb on + strand, within EX28DRAFT_4258 at 63.140 kb on - strand, within EX28DRAFT_4258 at 63.218 kb on + strand, within EX28DRAFT_4258 at 63.218 kb on + strand, within EX28DRAFT_4258 at 63.218 kb on + strand, within EX28DRAFT_4258 at 63.218 kb on + strand, within EX28DRAFT_4258 at 63.218 kb on + strand, within EX28DRAFT_4258 at 63.219 kb on - strand, within EX28DRAFT_4258 at 63.219 kb on - strand, within EX28DRAFT_4258 at 63.219 kb on - strand, within EX28DRAFT_4258 at 63.219 kb on - strand, within EX28DRAFT_4258 at 63.219 kb on - strand, within EX28DRAFT_4258 at 63.219 kb on - strand, within EX28DRAFT_4258
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 60,733 + EX28DRAFT_4254 0.84 +0.1 60,775 + +0.3 60,776 - +0.8 60,776 - +0.8 60,776 - -0.5 60,776 - -0.6 60,783 + +0.8 60,784 - +0.0 60,808 + +0.1 60,809 - -0.9 60,809 - -0.0 60,830 + -0.8 60,830 + -0.4 60,875 + -0.5 60,875 + -0.0 60,876 - +0.3 60,876 - -0.0 60,889 - +0.1 60,998 + EX28DRAFT_4255 0.30 +0.3 60,999 - EX28DRAFT_4255 0.30 +0.7 60,999 - EX28DRAFT_4255 0.30 +0.3 61,010 + EX28DRAFT_4255 0.33 -0.4 61,079 - EX28DRAFT_4255 0.50 -0.0 61,119 - EX28DRAFT_4255 0.60 -0.7 61,136 + EX28DRAFT_4255 0.64 +0.1 61,137 - EX28DRAFT_4255 0.64 -0.0 61,295 - -0.0 61,369 - EX28DRAFT_4256 0.29 +0.4 61,662 - +0.0 61,669 + +1.2 61,740 + EX28DRAFT_4257 0.14 -1.0 61,740 + EX28DRAFT_4257 0.14 +0.4 61,741 - EX28DRAFT_4257 0.14 +0.2 61,846 + EX28DRAFT_4257 0.31 +0.5 61,933 - EX28DRAFT_4257 0.46 -0.5 61,933 - EX28DRAFT_4257 0.46 -0.6 61,968 - EX28DRAFT_4257 0.51 +0.2 62,007 + EX28DRAFT_4257 0.58 -0.4 62,072 + EX28DRAFT_4257 0.69 +0.4 62,114 + EX28DRAFT_4257 0.76 -1.9 62,130 - EX28DRAFT_4257 0.78 -0.1 62,383 + +1.0 62,423 + +0.1 62,512 - -0.2 62,629 + +1.2 62,634 - -0.4 62,830 + EX28DRAFT_4258 0.23 -0.2 62,834 - EX28DRAFT_4258 0.24 +0.1 62,882 + EX28DRAFT_4258 0.28 +0.8 62,954 + EX28DRAFT_4258 0.34 +0.1 62,955 - EX28DRAFT_4258 0.34 -0.2 62,955 - EX28DRAFT_4258 0.34 +0.3 62,960 + EX28DRAFT_4258 0.35 +0.1 62,960 + EX28DRAFT_4258 0.35 +0.3 62,961 - EX28DRAFT_4258 0.35 -0.2 62,972 - EX28DRAFT_4258 0.36 +0.5 63,076 + EX28DRAFT_4258 0.45 -1.1 63,077 - EX28DRAFT_4258 0.45 +0.5 63,085 + EX28DRAFT_4258 0.46 -0.2 63,085 + EX28DRAFT_4258 0.46 -0.1 63,086 - EX28DRAFT_4258 0.46 -0.3 63,086 - EX28DRAFT_4258 0.46 -0.4 63,086 - EX28DRAFT_4258 0.46 +0.2 63,120 + EX28DRAFT_4258 0.49 +1.0 63,140 - EX28DRAFT_4258 0.51 -0.4 63,218 + EX28DRAFT_4258 0.58 -0.3 63,218 + EX28DRAFT_4258 0.58 -1.1 63,218 + EX28DRAFT_4258 0.58 -0.4 63,218 + EX28DRAFT_4258 0.58 -3.3 63,218 + EX28DRAFT_4258 0.58 -0.8 63,219 - EX28DRAFT_4258 0.58 -0.1 63,219 - EX28DRAFT_4258 0.58 +0.3 63,219 - EX28DRAFT_4258 0.58 +3.3 63,219 - EX28DRAFT_4258 0.58 -0.7 63,219 - EX28DRAFT_4258 0.58 -0.1 63,219 - EX28DRAFT_4258 0.58 -0.9
Or see this region's nucleotide sequence