Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2598 and EX28DRAFT_2599 are separated by 2 nucleotides EX28DRAFT_2599 and EX28DRAFT_2600 are separated by 91 nucleotides
EX28DRAFT_2598: EX28DRAFT_2598 - Beta-lactamase class C and other penicillin binding proteins, at 2,631,777 to 2,632,937
_2598
EX28DRAFT_2599: EX28DRAFT_2599 - Cyclic nucleotide-binding domain, at 2,632,940 to 2,633,563
_2599
EX28DRAFT_2600: EX28DRAFT_2600 - outer membrane autotransporter barrel domain, at 2,633,655 to 2,636,432
_2600
Position (kb)
2632
2633
2634 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2631.996 kb on - strand, within EX28DRAFT_2598 at 2632.119 kb on + strand, within EX28DRAFT_2598 at 2632.120 kb on - strand, within EX28DRAFT_2598 at 2632.150 kb on - strand, within EX28DRAFT_2598 at 2632.150 kb on - strand, within EX28DRAFT_2598 at 2632.240 kb on + strand, within EX28DRAFT_2598 at 2632.240 kb on + strand, within EX28DRAFT_2598 at 2632.240 kb on + strand, within EX28DRAFT_2598 at 2632.241 kb on - strand, within EX28DRAFT_2598 at 2632.241 kb on - strand, within EX28DRAFT_2598 at 2632.241 kb on - strand, within EX28DRAFT_2598 at 2632.276 kb on - strand, within EX28DRAFT_2598 at 2632.324 kb on - strand, within EX28DRAFT_2598 at 2632.383 kb on + strand, within EX28DRAFT_2598 at 2632.436 kb on + strand, within EX28DRAFT_2598 at 2632.503 kb on - strand, within EX28DRAFT_2598 at 2632.506 kb on - strand, within EX28DRAFT_2598 at 2632.716 kb on + strand, within EX28DRAFT_2598 at 2632.716 kb on + strand, within EX28DRAFT_2598 at 2632.716 kb on + strand, within EX28DRAFT_2598 at 2632.717 kb on - strand, within EX28DRAFT_2598 at 2632.717 kb on - strand, within EX28DRAFT_2598 at 2632.719 kb on - strand, within EX28DRAFT_2598 at 2632.785 kb on + strand, within EX28DRAFT_2598 at 2632.785 kb on + strand, within EX28DRAFT_2598 at 2632.785 kb on + strand, within EX28DRAFT_2598 at 2632.785 kb on + strand, within EX28DRAFT_2598 at 2632.785 kb on + strand, within EX28DRAFT_2598 at 2632.785 kb on + strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.786 kb on - strand, within EX28DRAFT_2598 at 2632.787 kb on + strand, within EX28DRAFT_2598 at 2632.787 kb on + strand, within EX28DRAFT_2598 at 2632.794 kb on - strand, within EX28DRAFT_2598 at 2632.877 kb on + strand at 2632.931 kb on + strand at 2632.998 kb on + strand at 2632.998 kb on + strand at 2632.998 kb on + strand at 2632.999 kb on - strand at 2632.999 kb on - strand at 2632.999 kb on - strand at 2633.069 kb on - strand, within EX28DRAFT_2599 at 2633.149 kb on - strand, within EX28DRAFT_2599 at 2633.155 kb on + strand, within EX28DRAFT_2599 at 2633.155 kb on + strand, within EX28DRAFT_2599 at 2633.156 kb on - strand, within EX28DRAFT_2599 at 2633.156 kb on - strand, within EX28DRAFT_2599 at 2633.193 kb on + strand, within EX28DRAFT_2599 at 2633.193 kb on + strand, within EX28DRAFT_2599 at 2633.193 kb on + strand, within EX28DRAFT_2599 at 2633.193 kb on + strand, within EX28DRAFT_2599 at 2633.193 kb on + strand, within EX28DRAFT_2599 at 2633.194 kb on - strand, within EX28DRAFT_2599 at 2633.194 kb on - strand, within EX28DRAFT_2599 at 2633.239 kb on - strand, within EX28DRAFT_2599 at 2633.239 kb on - strand, within EX28DRAFT_2599 at 2633.299 kb on + strand, within EX28DRAFT_2599 at 2633.299 kb on + strand, within EX28DRAFT_2599 at 2633.341 kb on + strand, within EX28DRAFT_2599 at 2633.438 kb on - strand, within EX28DRAFT_2599 at 2633.468 kb on + strand, within EX28DRAFT_2599 at 2633.469 kb on - strand, within EX28DRAFT_2599 at 2633.488 kb on + strand, within EX28DRAFT_2599 at 2633.489 kb on - strand, within EX28DRAFT_2599 at 2633.489 kb on - strand, within EX28DRAFT_2599 at 2633.583 kb on + strand at 2633.584 kb on - strand at 2633.608 kb on - strand at 2633.619 kb on - strand at 2633.666 kb on + strand at 2633.666 kb on + strand at 2633.668 kb on + strand at 2633.668 kb on + strand at 2633.722 kb on + strand at 2633.722 kb on + strand at 2633.723 kb on - strand at 2633.723 kb on - strand at 2633.723 kb on - strand at 2633.738 kb on - strand at 2633.831 kb on + strand at 2633.858 kb on - strand at 2633.864 kb on - strand at 2633.864 kb on - strand at 2633.864 kb on - strand at 2633.879 kb on - strand at 2633.952 kb on - strand, within EX28DRAFT_2600 at 2633.952 kb on - strand, within EX28DRAFT_2600 at 2633.956 kb on + strand, within EX28DRAFT_2600 at 2633.956 kb on + strand, within EX28DRAFT_2600 at 2633.956 kb on + strand, within EX28DRAFT_2600 at 2633.957 kb on - strand, within EX28DRAFT_2600 at 2634.025 kb on - strand, within EX28DRAFT_2600 at 2634.034 kb on + strand, within EX28DRAFT_2600 at 2634.035 kb on - strand, within EX28DRAFT_2600 at 2634.073 kb on + strand, within EX28DRAFT_2600 at 2634.114 kb on - strand, within EX28DRAFT_2600 at 2634.128 kb on - strand, within EX28DRAFT_2600 at 2634.176 kb on - strand, within EX28DRAFT_2600 at 2634.226 kb on + strand, within EX28DRAFT_2600 at 2634.227 kb on - strand, within EX28DRAFT_2600 at 2634.359 kb on + strand, within EX28DRAFT_2600 at 2634.425 kb on - strand, within EX28DRAFT_2600 at 2634.512 kb on + strand, within EX28DRAFT_2600
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,631,996 - EX28DRAFT_2598 0.19 +0.0 2,632,119 + EX28DRAFT_2598 0.29 -0.2 2,632,120 - EX28DRAFT_2598 0.30 -0.3 2,632,150 - EX28DRAFT_2598 0.32 -0.2 2,632,150 - EX28DRAFT_2598 0.32 +0.2 2,632,240 + EX28DRAFT_2598 0.40 +0.6 2,632,240 + EX28DRAFT_2598 0.40 -0.4 2,632,240 + EX28DRAFT_2598 0.40 -0.7 2,632,241 - EX28DRAFT_2598 0.40 +0.1 2,632,241 - EX28DRAFT_2598 0.40 +2.1 2,632,241 - EX28DRAFT_2598 0.40 +0.1 2,632,276 - EX28DRAFT_2598 0.43 +0.2 2,632,324 - EX28DRAFT_2598 0.47 +0.2 2,632,383 + EX28DRAFT_2598 0.52 +0.2 2,632,436 + EX28DRAFT_2598 0.57 -0.3 2,632,503 - EX28DRAFT_2598 0.63 -0.0 2,632,506 - EX28DRAFT_2598 0.63 -0.4 2,632,716 + EX28DRAFT_2598 0.81 +0.5 2,632,716 + EX28DRAFT_2598 0.81 -0.1 2,632,716 + EX28DRAFT_2598 0.81 +1.1 2,632,717 - EX28DRAFT_2598 0.81 +0.3 2,632,717 - EX28DRAFT_2598 0.81 -0.8 2,632,719 - EX28DRAFT_2598 0.81 -0.3 2,632,785 + EX28DRAFT_2598 0.87 -0.3 2,632,785 + EX28DRAFT_2598 0.87 -0.1 2,632,785 + EX28DRAFT_2598 0.87 +0.2 2,632,785 + EX28DRAFT_2598 0.87 +0.4 2,632,785 + EX28DRAFT_2598 0.87 +1.0 2,632,785 + EX28DRAFT_2598 0.87 +0.3 2,632,786 - EX28DRAFT_2598 0.87 +0.9 2,632,786 - EX28DRAFT_2598 0.87 +0.2 2,632,786 - EX28DRAFT_2598 0.87 +0.4 2,632,786 - EX28DRAFT_2598 0.87 -0.2 2,632,786 - EX28DRAFT_2598 0.87 +1.0 2,632,786 - EX28DRAFT_2598 0.87 -0.7 2,632,786 - EX28DRAFT_2598 0.87 -0.1 2,632,786 - EX28DRAFT_2598 0.87 -0.2 2,632,786 - EX28DRAFT_2598 0.87 -0.4 2,632,786 - EX28DRAFT_2598 0.87 +1.7 2,632,787 + EX28DRAFT_2598 0.87 +0.2 2,632,787 + EX28DRAFT_2598 0.87 +1.4 2,632,794 - EX28DRAFT_2598 0.88 -0.1 2,632,877 + +0.3 2,632,931 + +0.3 2,632,998 + +0.2 2,632,998 + -0.5 2,632,998 + +0.4 2,632,999 - -0.0 2,632,999 - -0.5 2,632,999 - -0.8 2,633,069 - EX28DRAFT_2599 0.21 -2.4 2,633,149 - EX28DRAFT_2599 0.33 -0.7 2,633,155 + EX28DRAFT_2599 0.34 +0.6 2,633,155 + EX28DRAFT_2599 0.34 -1.1 2,633,156 - EX28DRAFT_2599 0.35 +0.1 2,633,156 - EX28DRAFT_2599 0.35 -0.1 2,633,193 + EX28DRAFT_2599 0.41 +0.3 2,633,193 + EX28DRAFT_2599 0.41 +0.0 2,633,193 + EX28DRAFT_2599 0.41 +0.8 2,633,193 + EX28DRAFT_2599 0.41 -1.1 2,633,193 + EX28DRAFT_2599 0.41 -1.4 2,633,194 - EX28DRAFT_2599 0.41 +1.0 2,633,194 - EX28DRAFT_2599 0.41 -0.3 2,633,239 - EX28DRAFT_2599 0.48 +0.1 2,633,239 - EX28DRAFT_2599 0.48 -0.2 2,633,299 + EX28DRAFT_2599 0.58 +1.0 2,633,299 + EX28DRAFT_2599 0.58 -0.2 2,633,341 + EX28DRAFT_2599 0.64 +0.3 2,633,438 - EX28DRAFT_2599 0.80 -0.3 2,633,468 + EX28DRAFT_2599 0.85 -0.5 2,633,469 - EX28DRAFT_2599 0.85 -0.1 2,633,488 + EX28DRAFT_2599 0.88 -0.3 2,633,489 - EX28DRAFT_2599 0.88 -0.4 2,633,489 - EX28DRAFT_2599 0.88 -0.8 2,633,583 + -0.8 2,633,584 - +0.0 2,633,608 - +0.7 2,633,619 - +0.7 2,633,666 + +0.6 2,633,666 + -0.5 2,633,668 + -0.1 2,633,668 + +0.6 2,633,722 + -0.2 2,633,722 + +0.1 2,633,723 - -0.1 2,633,723 - -0.0 2,633,723 - +0.0 2,633,738 - -0.1 2,633,831 + -1.1 2,633,858 - +0.2 2,633,864 - -1.1 2,633,864 - -0.9 2,633,864 - +0.1 2,633,879 - +0.0 2,633,952 - EX28DRAFT_2600 0.11 +0.5 2,633,952 - EX28DRAFT_2600 0.11 +0.1 2,633,956 + EX28DRAFT_2600 0.11 +0.5 2,633,956 + EX28DRAFT_2600 0.11 -0.8 2,633,956 + EX28DRAFT_2600 0.11 +0.1 2,633,957 - EX28DRAFT_2600 0.11 +0.0 2,634,025 - EX28DRAFT_2600 0.13 -0.3 2,634,034 + EX28DRAFT_2600 0.14 -0.2 2,634,035 - EX28DRAFT_2600 0.14 +0.3 2,634,073 + EX28DRAFT_2600 0.15 -0.1 2,634,114 - EX28DRAFT_2600 0.17 -0.9 2,634,128 - EX28DRAFT_2600 0.17 +0.3 2,634,176 - EX28DRAFT_2600 0.19 -0.2 2,634,226 + EX28DRAFT_2600 0.21 +0.3 2,634,227 - EX28DRAFT_2600 0.21 +1.6 2,634,359 + EX28DRAFT_2600 0.25 +0.0 2,634,425 - EX28DRAFT_2600 0.28 -0.9 2,634,512 + EX28DRAFT_2600 0.31 +0.4
Or see this region's nucleotide sequence