Strain Fitness in Bosea sp. OAE506 around ABIE41_RS21135

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS21130 and ABIE41_RS21135 are separated by 113 nucleotidesABIE41_RS21135 and ABIE41_RS21140 are separated by 11 nucleotides ABIE41_RS21130: ABIE41_RS21130 - hypothetical protein, at 4,343,187 to 4,344,644 _RS21130 ABIE41_RS21135: ABIE41_RS21135 - hypothetical protein, at 4,344,758 to 4,345,522 _RS21135 ABIE41_RS21140: ABIE41_RS21140 - methyl-accepting chemotaxis protein, at 4,345,534 to 4,347,204 _RS21140 Position (kb) 4344 4345 4346Strain fitness (log2 ratio) -1 0 1 2at 4343.790 kb on + strand, within ABIE41_RS21130at 4343.838 kb on + strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.839 kb on - strand, within ABIE41_RS21130at 4343.996 kb on + strand, within ABIE41_RS21130at 4344.039 kb on + strand, within ABIE41_RS21130at 4344.057 kb on + strand, within ABIE41_RS21130at 4344.058 kb on - strand, within ABIE41_RS21130at 4344.079 kb on - strand, within ABIE41_RS21130at 4344.079 kb on - strand, within ABIE41_RS21130at 4344.258 kb on + strand, within ABIE41_RS21130at 4344.258 kb on + strand, within ABIE41_RS21130at 4344.259 kb on - strand, within ABIE41_RS21130at 4344.259 kb on - strand, within ABIE41_RS21130at 4344.346 kb on + strand, within ABIE41_RS21130at 4344.346 kb on + strand, within ABIE41_RS21130at 4344.347 kb on - strand, within ABIE41_RS21130at 4344.357 kb on + strand, within ABIE41_RS21130at 4344.358 kb on - strand, within ABIE41_RS21130at 4344.358 kb on - strand, within ABIE41_RS21130at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.013 kb on + strand, within ABIE41_RS21135at 4345.014 kb on - strand, within ABIE41_RS21135at 4345.014 kb on - strand, within ABIE41_RS21135at 4345.014 kb on - strand, within ABIE41_RS21135at 4345.116 kb on - strand, within ABIE41_RS21135at 4345.261 kb on + strand, within ABIE41_RS21135at 4345.262 kb on - strand, within ABIE41_RS21135at 4345.520 kb on + strandat 4345.521 kb on - strandat 4345.643 kb on + strandat 4345.769 kb on + strand, within ABIE41_RS21140at 4345.770 kb on - strand, within ABIE41_RS21140at 4345.770 kb on - strand, within ABIE41_RS21140at 4345.770 kb on - strand, within ABIE41_RS21140at 4345.770 kb on - strand, within ABIE41_RS21140at 4345.937 kb on + strand, within ABIE41_RS21140at 4345.938 kb on - strand, within ABIE41_RS21140

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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4,343,790 + ABIE41_RS21130 0.41 +0.3
4,343,838 + ABIE41_RS21130 0.45 +0.1
4,343,839 - ABIE41_RS21130 0.45 -1.0
4,343,839 - ABIE41_RS21130 0.45 +0.4
4,343,839 - ABIE41_RS21130 0.45 -0.2
4,343,839 - ABIE41_RS21130 0.45 +1.1
4,343,839 - ABIE41_RS21130 0.45 -1.0
4,343,839 - ABIE41_RS21130 0.45 +0.2
4,343,839 - ABIE41_RS21130 0.45 -0.6
4,343,996 + ABIE41_RS21130 0.55 -0.0
4,344,039 + ABIE41_RS21130 0.58 -0.2
4,344,057 + ABIE41_RS21130 0.60 -0.2
4,344,058 - ABIE41_RS21130 0.60 +0.3
4,344,079 - ABIE41_RS21130 0.61 +0.6
4,344,079 - ABIE41_RS21130 0.61 +1.0
4,344,258 + ABIE41_RS21130 0.73 -1.1
4,344,258 + ABIE41_RS21130 0.73 +0.3
4,344,259 - ABIE41_RS21130 0.74 -0.8
4,344,259 - ABIE41_RS21130 0.74 -1.2
4,344,346 + ABIE41_RS21130 0.79 -0.0
4,344,346 + ABIE41_RS21130 0.79 +2.2
4,344,347 - ABIE41_RS21130 0.80 +0.1
4,344,357 + ABIE41_RS21130 0.80 -0.6
4,344,358 - ABIE41_RS21130 0.80 +0.1
4,344,358 - ABIE41_RS21130 0.80 -0.1
4,345,013 + ABIE41_RS21135 0.33 +0.2
4,345,013 + ABIE41_RS21135 0.33 -0.1
4,345,013 + ABIE41_RS21135 0.33 -0.9
4,345,013 + ABIE41_RS21135 0.33 +0.8
4,345,013 + ABIE41_RS21135 0.33 -0.7
4,345,013 + ABIE41_RS21135 0.33 -0.5
4,345,013 + ABIE41_RS21135 0.33 -0.0
4,345,013 + ABIE41_RS21135 0.33 +0.2
4,345,014 - ABIE41_RS21135 0.33 +0.0
4,345,014 - ABIE41_RS21135 0.33 -0.5
4,345,014 - ABIE41_RS21135 0.33 +0.6
4,345,116 - ABIE41_RS21135 0.47 -0.2
4,345,261 + ABIE41_RS21135 0.66 +0.7
4,345,262 - ABIE41_RS21135 0.66 -0.0
4,345,520 + +0.2
4,345,521 - +0.3
4,345,643 + -0.1
4,345,769 + ABIE41_RS21140 0.14 -0.4
4,345,770 - ABIE41_RS21140 0.14 -1.1
4,345,770 - ABIE41_RS21140 0.14 +0.1
4,345,770 - ABIE41_RS21140 0.14 -0.7
4,345,770 - ABIE41_RS21140 0.14 -0.6
4,345,937 + ABIE41_RS21140 0.24 -0.1
4,345,938 - ABIE41_RS21140 0.24 -0.4

Or see this region's nucleotide sequence