Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06310

Experiment: L-Histidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (C)
1,300,535	+		ABIE41_RS06305	0.50	-1.9
1,300,535	+		ABIE41_RS06305	0.50	-0.2
1,300,535	+		ABIE41_RS06305	0.50	+0.7
1,300,535	+		ABIE41_RS06305	0.50	-0.1
1,300,535	+		ABIE41_RS06305	0.50	+0.4
1,300,607	+		ABIE41_RS06305	0.53	-2.3
1,300,608	-		ABIE41_RS06305	0.53	+0.8
1,300,608	-		ABIE41_RS06305	0.53	-0.3
1,300,608	-		ABIE41_RS06305	0.53	-0.6
1,300,686	-		ABIE41_RS06305	0.57	-0.7
1,300,772	+		ABIE41_RS06305	0.62	-0.1
1,300,772	+		ABIE41_RS06305	0.62	-1.0
1,300,772	+		ABIE41_RS06305	0.62	-1.9
1,300,773	-		ABIE41_RS06305	0.62	-1.4
1,300,773	-		ABIE41_RS06305	0.62	-0.5
1,300,773	-		ABIE41_RS06305	0.62	+0.7
1,300,773	-		ABIE41_RS06305	0.62	+0.7
1,300,773	-		ABIE41_RS06305	0.62	-1.7
1,300,836	-		ABIE41_RS06305	0.65	+0.1
1,300,856	+		ABIE41_RS06305	0.66	+0.4
1,300,856	+		ABIE41_RS06305	0.66	+0.4
1,300,857	-		ABIE41_RS06305	0.66	+0.3
1,300,857	-		ABIE41_RS06305	0.66	+1.2
1,300,857	-		ABIE41_RS06305	0.66	+0.4
1,300,857	-		ABIE41_RS06305	0.66	+0.1
1,300,857	-		ABIE41_RS06305	0.66	-0.1
1,300,857	-		ABIE41_RS06305	0.66	-0.3
1,300,857	-		ABIE41_RS06305	0.66	-0.9
1,301,009	+		ABIE41_RS06305	0.74	-1.9
1,301,009	+		ABIE41_RS06305	0.74	+0.6
1,301,009	+		ABIE41_RS06305	0.74	+0.9
1,301,009	+		ABIE41_RS06305	0.74	+0.5
1,301,009	+		ABIE41_RS06305	0.74	-0.1
1,301,009	+		ABIE41_RS06305	0.74	+0.6
1,301,009	+		ABIE41_RS06305	0.74	-0.7
1,301,009	+		ABIE41_RS06305	0.74	+0.0
1,301,009	+		ABIE41_RS06305	0.74	-0.9
1,301,009	+		ABIE41_RS06305	0.74	-0.1
1,301,009	+		ABIE41_RS06305	0.74	+0.3
1,301,009	+		ABIE41_RS06305	0.74	-0.0
1,301,009	+		ABIE41_RS06305	0.74	+0.8
1,301,009	+		ABIE41_RS06305	0.74	-1.9
1,301,009	+		ABIE41_RS06305	0.74	+0.3
1,301,009	+		ABIE41_RS06305	0.74	-0.1
1,301,009	+		ABIE41_RS06305	0.74	+0.3
1,301,009	+		ABIE41_RS06305	0.74	+0.4
1,301,010	-		ABIE41_RS06305	0.74	-0.4
1,301,010	-		ABIE41_RS06305	0.74	-0.0
1,301,010	-		ABIE41_RS06305	0.74	+1.5
1,301,010	-		ABIE41_RS06305	0.74	-0.1
1,301,010	-		ABIE41_RS06305	0.74	-1.3
1,301,010	-		ABIE41_RS06305	0.74	-1.1
1,301,010	-		ABIE41_RS06305	0.74	+0.2
1,301,010	-		ABIE41_RS06305	0.74	+0.2
1,301,010	-		ABIE41_RS06305	0.74	-0.5
1,301,099	+		ABIE41_RS06305	0.79	+0.1
1,301,099	+		ABIE41_RS06305	0.79	-0.3
1,301,099	+		ABIE41_RS06305	0.79	+1.7
1,301,099	+		ABIE41_RS06305	0.79	-0.5
1,301,100	-		ABIE41_RS06305	0.79	+0.1
1,301,100	-		ABIE41_RS06305	0.79	-2.1
1,301,121	-		ABIE41_RS06305	0.80	-0.2
1,301,150	+		ABIE41_RS06305	0.81	+0.4
1,301,150	+		ABIE41_RS06305	0.81	+0.3
1,301,150	+		ABIE41_RS06305	0.81	-0.3
1,301,150	+		ABIE41_RS06305	0.81	+0.4
1,301,150	+		ABIE41_RS06305	0.81	+0.2
1,301,150	+		ABIE41_RS06305	0.81	-0.0
1,301,151	-		ABIE41_RS06305	0.81	+0.1
1,301,151	-		ABIE41_RS06305	0.81	+1.0
1,301,151	-		ABIE41_RS06305	0.81	+0.1
1,301,151	-		ABIE41_RS06305	0.81	-0.0
1,301,151	-		ABIE41_RS06305	0.81	+0.3
1,301,190	-		ABIE41_RS06305	0.83	-0.6
1,301,201	+		ABIE41_RS06305	0.84	+0.1
1,301,201	+		ABIE41_RS06305	0.84	+0.6
1,301,201	+		ABIE41_RS06305	0.84	-0.1
1,301,202	-		ABIE41_RS06305	0.84	-0.7
1,301,202	-		ABIE41_RS06305	0.84	-0.1
1,301,270	+		ABIE41_RS06305	0.87	-0.5
1,301,270	+		ABIE41_RS06305	0.87	-0.0
1,301,270	+		ABIE41_RS06305	0.87	+0.8
1,301,270	+		ABIE41_RS06305	0.87	+2.0
1,301,270	+		ABIE41_RS06305	0.87	+0.3
1,301,271	-		ABIE41_RS06305	0.87	+2.9
1,301,300	+		ABIE41_RS06305	0.89	-0.5
1,301,300	+		ABIE41_RS06305	0.89	+0.1
1,301,300	+		ABIE41_RS06305	0.89	-0.9
1,301,300	+		ABIE41_RS06305	0.89	+1.5
1,301,300	+		ABIE41_RS06305	0.89	+1.9
1,301,300	+		ABIE41_RS06305	0.89	-0.2
1,301,301	-		ABIE41_RS06305	0.89	-0.5
1,301,301	-		ABIE41_RS06305	0.89	-0.1
1,301,301	-		ABIE41_RS06305	0.89	-0.1
1,301,301	-		ABIE41_RS06305	0.89	-0.2
1,301,302	-		ABIE41_RS06305	0.89	-0.1
1,301,303	+		ABIE41_RS06305	0.89	-0.1
1,301,303	+		ABIE41_RS06305	0.89	+0.5
1,301,304	-		ABIE41_RS06305	0.89	+0.5
1,301,348	+				-1.6
1,301,348	+				-1.5
1,301,348	+				+0.9
1,301,348	+				-0.1
1,301,348	+				-0.9
1,301,348	+				+0.2
1,301,349	-				-0.3
1,301,349	-				+0.2
1,301,379	-				+1.4
1,301,454	+				-0.5
1,301,457	-				+0.5
1,301,457	-				+0.0
1,301,457	-				+0.1
1,301,465	+				-0.4
1,301,465	+				-1.2
1,301,465	+				-2.0
1,301,553	+				-0.1
1,301,553	+				-1.1
1,301,554	-				+0.7
1,301,554	-				-1.7
1,301,609	+		ABIE41_RS06310	0.30	-0.7
1,301,610	-		ABIE41_RS06310	0.30	-0.5
1,301,610	-		ABIE41_RS06310	0.30	-0.9
1,301,636	-		ABIE41_RS06310	0.40	+0.1
1,301,637	+		ABIE41_RS06310	0.41	-1.7
1,301,637	+		ABIE41_RS06310	0.41	-0.6
1,301,637	+		ABIE41_RS06310	0.41	-0.2
1,301,637	+		ABIE41_RS06310	0.41	-0.1
1,301,692	+		ABIE41_RS06310	0.62	-0.5
1,301,692	+		ABIE41_RS06310	0.62	-0.3
1,301,692	+		ABIE41_RS06310	0.62	-1.8
1,301,693	-		ABIE41_RS06310	0.62	-1.7
1,301,693	-		ABIE41_RS06310	0.62	-0.5
1,301,693	-		ABIE41_RS06310	0.62	+2.7
1,301,693	-		ABIE41_RS06310	0.62	+0.3
1,301,693	-		ABIE41_RS06310	0.62	+0.0
1,301,736	+		ABIE41_RS06310	0.79	-1.7
1,301,736	+		ABIE41_RS06310	0.79	-0.1
1,301,736	+		ABIE41_RS06310	0.79	+0.6
1,301,736	+		ABIE41_RS06310	0.79	+1.0
1,301,736	+		ABIE41_RS06310	0.79	+0.7
1,301,736	+		ABIE41_RS06310	0.79	+0.2
1,301,737	-		ABIE41_RS06310	0.79	+0.4
1,301,880	-				-1.3
1,301,937	-				-0.2
1,301,937	-				-0.6
1,301,937	-				-0.6
1,301,938	+				+0.1
1,301,938	+				-1.9
1,301,939	-				-0.2
1,301,944	+				-0.3
1,301,944	+				-0.2
1,301,944	+				-0.7
1,301,945	-				+0.1
1,301,950	+				-2.6
1,301,950	+				+0.4
1,302,169	-		ABIE41_RS06315	0.23	-0.3
1,302,292	+		ABIE41_RS06315	0.35	-2.0
1,302,293	-		ABIE41_RS06315	0.35	-0.0
1,302,421	+		ABIE41_RS06315	0.48	-0.1
1,302,421	+		ABIE41_RS06315	0.48	+0.1
1,302,421	+		ABIE41_RS06315	0.48	-0.5
1,302,422	-		ABIE41_RS06315	0.48	-1.0
1,302,422	-		ABIE41_RS06315	0.48	+0.4
1,302,422	-		ABIE41_RS06315	0.48	+0.4
1,302,422	-		ABIE41_RS06315	0.48	-0.2
1,302,422	-		ABIE41_RS06315	0.48	-0.4
1,302,422	-		ABIE41_RS06315	0.48	-0.5
1,302,680	-		ABIE41_RS06315	0.74	-1.2
1,302,790	+		ABIE41_RS06315	0.86	-0.2