Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS03370 and ABIE41_RS03375 overlap by 1 nucleotides ABIE41_RS03375 and ABIE41_RS03380 are separated by 1 nucleotides ABIE41_RS03380 and ABIE41_RS03385 overlap by 4 nucleotides ABIE41_RS03385 and ABIE41_RS03390 overlap by 7 nucleotides
ABIE41_RS03370: ABIE41_RS03370 - purine-nucleoside phosphorylase, at 702,070 to 702,882
_RS03370
ABIE41_RS03375: ABIE41_RS03375 - deoxyribose-phosphate aldolase, at 702,882 to 703,646
_RS03375
ABIE41_RS03380: ABIE41_RS03380 - thymidine phosphorylase, at 703,648 to 704,976
_RS03380
ABIE41_RS03385: ABIE41_RS03385 - glyoxylate/hydroxypyruvate reductase A, at 704,973 to 705,917
_RS03385
ABIE41_RS03390: ABIE41_RS03390 - SDR family NAD(P)-dependent oxidoreductase, at 705,911 to 706,768
_RS03390
Position (kb) 703
704
705 Strain fitness (log2 ratio) -2
-1
0
1
2 at 702.765 kb on + strand, within ABIE41_RS03370 at 702.765 kb on + strand, within ABIE41_RS03370 at 702.766 kb on - strand, within ABIE41_RS03370 at 702.766 kb on - strand, within ABIE41_RS03370 at 702.768 kb on + strand, within ABIE41_RS03370 at 702.768 kb on + strand, within ABIE41_RS03370 at 702.768 kb on + strand, within ABIE41_RS03370 at 702.768 kb on + strand, within ABIE41_RS03370 at 702.768 kb on + strand, within ABIE41_RS03370 at 702.846 kb on - strand at 702.846 kb on - strand at 702.846 kb on - strand at 703.302 kb on + strand, within ABIE41_RS03375 at 703.303 kb on - strand, within ABIE41_RS03375 at 703.507 kb on - strand, within ABIE41_RS03375 at 703.641 kb on + strand at 703.641 kb on + strand at 703.642 kb on - strand at 703.644 kb on - strand at 703.963 kb on + strand, within ABIE41_RS03380 at 703.963 kb on + strand, within ABIE41_RS03380 at 703.963 kb on + strand, within ABIE41_RS03380 at 703.963 kb on + strand, within ABIE41_RS03380 at 703.963 kb on + strand, within ABIE41_RS03380 at 703.963 kb on + strand, within ABIE41_RS03380 at 703.963 kb on + strand, within ABIE41_RS03380 at 703.964 kb on - strand, within ABIE41_RS03380 at 703.964 kb on - strand, within ABIE41_RS03380 at 703.964 kb on - strand, within ABIE41_RS03380 at 703.964 kb on - strand, within ABIE41_RS03380 at 704.038 kb on + strand, within ABIE41_RS03380 at 704.038 kb on + strand, within ABIE41_RS03380 at 704.038 kb on + strand, within ABIE41_RS03380 at 704.038 kb on + strand, within ABIE41_RS03380 at 704.039 kb on - strand, within ABIE41_RS03380 at 704.143 kb on + strand, within ABIE41_RS03380 at 704.143 kb on + strand, within ABIE41_RS03380 at 704.144 kb on - strand, within ABIE41_RS03380 at 704.144 kb on - strand, within ABIE41_RS03380 at 704.413 kb on + strand, within ABIE41_RS03380 at 704.414 kb on - strand, within ABIE41_RS03380 at 704.414 kb on - strand, within ABIE41_RS03380 at 704.414 kb on - strand, within ABIE41_RS03380 at 704.414 kb on - strand, within ABIE41_RS03380 at 704.639 kb on - strand, within ABIE41_RS03380 at 704.639 kb on - strand, within ABIE41_RS03380 at 704.769 kb on + strand, within ABIE41_RS03380 at 704.903 kb on - strand at 704.965 kb on - strand at 704.965 kb on - strand at 704.965 kb on - strand at 704.965 kb on - strand at 704.965 kb on - strand at 705.096 kb on + strand, within ABIE41_RS03385 at 705.096 kb on + strand, within ABIE41_RS03385 at 705.096 kb on + strand, within ABIE41_RS03385 at 705.096 kb on + strand, within ABIE41_RS03385 at 705.097 kb on - strand, within ABIE41_RS03385 at 705.097 kb on - strand, within ABIE41_RS03385 at 705.097 kb on - strand, within ABIE41_RS03385 at 705.097 kb on - strand, within ABIE41_RS03385 at 705.264 kb on + strand, within ABIE41_RS03385 at 705.264 kb on + strand, within ABIE41_RS03385 at 705.264 kb on + strand, within ABIE41_RS03385 at 705.264 kb on + strand, within ABIE41_RS03385 at 705.264 kb on + strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.265 kb on - strand, within ABIE41_RS03385 at 705.288 kb on + strand, within ABIE41_RS03385 at 705.289 kb on - strand, within ABIE41_RS03385 at 705.309 kb on + strand, within ABIE41_RS03385 at 705.309 kb on + strand, within ABIE41_RS03385 at 705.310 kb on - strand, within ABIE41_RS03385 at 705.534 kb on - strand, within ABIE41_RS03385
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 702,765 + ABIE41_RS03370 0.85 -0.1 702,765 + ABIE41_RS03370 0.85 -0.7 702,766 - ABIE41_RS03370 0.86 -0.3 702,766 - ABIE41_RS03370 0.86 -0.3 702,768 + ABIE41_RS03370 0.86 +0.8 702,768 + ABIE41_RS03370 0.86 +0.3 702,768 + ABIE41_RS03370 0.86 +0.5 702,768 + ABIE41_RS03370 0.86 -0.5 702,768 + ABIE41_RS03370 0.86 +0.6 702,846 - +0.1 702,846 - +1.7 702,846 - -2.2 703,302 + ABIE41_RS03375 0.55 +0.0 703,303 - ABIE41_RS03375 0.55 +0.9 703,507 - ABIE41_RS03375 0.82 +0.5 703,641 + -0.2 703,641 + -0.9 703,642 - -0.6 703,644 - -0.1 703,963 + ABIE41_RS03380 0.24 -0.0 703,963 + ABIE41_RS03380 0.24 +0.5 703,963 + ABIE41_RS03380 0.24 +0.7 703,963 + ABIE41_RS03380 0.24 -0.7 703,963 + ABIE41_RS03380 0.24 +0.5 703,963 + ABIE41_RS03380 0.24 +1.1 703,963 + ABIE41_RS03380 0.24 +1.1 703,964 - ABIE41_RS03380 0.24 +0.4 703,964 - ABIE41_RS03380 0.24 +0.8 703,964 - ABIE41_RS03380 0.24 -0.5 703,964 - ABIE41_RS03380 0.24 -0.3 704,038 + ABIE41_RS03380 0.29 -0.2 704,038 + ABIE41_RS03380 0.29 +0.7 704,038 + ABIE41_RS03380 0.29 -1.3 704,038 + ABIE41_RS03380 0.29 -0.9 704,039 - ABIE41_RS03380 0.29 +1.7 704,143 + ABIE41_RS03380 0.37 +0.7 704,143 + ABIE41_RS03380 0.37 -0.1 704,144 - ABIE41_RS03380 0.37 +0.4 704,144 - ABIE41_RS03380 0.37 -0.4 704,413 + ABIE41_RS03380 0.58 +1.4 704,414 - ABIE41_RS03380 0.58 +1.9 704,414 - ABIE41_RS03380 0.58 +0.5 704,414 - ABIE41_RS03380 0.58 +0.7 704,414 - ABIE41_RS03380 0.58 -0.3 704,639 - ABIE41_RS03380 0.75 +0.6 704,639 - ABIE41_RS03380 0.75 +0.0 704,769 + ABIE41_RS03380 0.84 -0.2 704,903 - +0.7 704,965 - -0.1 704,965 - -0.4 704,965 - +0.3 704,965 - +0.0 704,965 - +1.3 705,096 + ABIE41_RS03385 0.13 +0.7 705,096 + ABIE41_RS03385 0.13 +0.7 705,096 + ABIE41_RS03385 0.13 -0.9 705,096 + ABIE41_RS03385 0.13 +0.1 705,097 - ABIE41_RS03385 0.13 +0.1 705,097 - ABIE41_RS03385 0.13 -1.9 705,097 - ABIE41_RS03385 0.13 -0.6 705,097 - ABIE41_RS03385 0.13 -0.9 705,264 + ABIE41_RS03385 0.31 +0.3 705,264 + ABIE41_RS03385 0.31 +0.6 705,264 + ABIE41_RS03385 0.31 +1.0 705,264 + ABIE41_RS03385 0.31 +0.3 705,264 + ABIE41_RS03385 0.31 +1.9 705,265 - ABIE41_RS03385 0.31 -1.2 705,265 - ABIE41_RS03385 0.31 -0.0 705,265 - ABIE41_RS03385 0.31 -0.2 705,265 - ABIE41_RS03385 0.31 +0.0 705,265 - ABIE41_RS03385 0.31 +0.0 705,265 - ABIE41_RS03385 0.31 -0.3 705,265 - ABIE41_RS03385 0.31 -0.6 705,265 - ABIE41_RS03385 0.31 +1.7 705,288 + ABIE41_RS03385 0.33 +0.2 705,289 - ABIE41_RS03385 0.33 -1.2 705,309 + ABIE41_RS03385 0.36 +1.9 705,309 + ABIE41_RS03385 0.36 -0.3 705,310 - ABIE41_RS03385 0.36 -0.4 705,534 - ABIE41_RS03385 0.59 +2.1
Or see this region's nucleotide sequence