Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22640 and ABID97_RS22645 overlap by 1 nucleotides ABID97_RS22645 and ABID97_RS22650 are separated by 160 nucleotides ABID97_RS22650 and ABID97_RS22655 are separated by 58 nucleotides ABID97_RS22655 and ABID97_RS22660 are separated by 126 nucleotides
ABID97_RS22640: ABID97_RS22640 - isoleucine--tRNA ligase, at 4,688,266 to 4,691,116
_RS22640
ABID97_RS22645: ABID97_RS22645 - signal peptidase II, at 4,691,116 to 4,691,628
_RS22645
ABID97_RS22650: ABID97_RS22650 - Na/Pi cotransporter family protein, at 4,691,789 to 4,693,450
_RS22650
ABID97_RS22655: ABID97_RS22655 - response regulator transcription factor, at 4,693,509 to 4,693,916
_RS22655
ABID97_RS22660: ABID97_RS22660 - quinone oxidoreductase, at 4,694,043 to 4,695,026
_RS22660
Position (kb) 4691
4692
4693
4694 Strain fitness (log2 ratio) -2
-1
0
1 at 4691.627 kb on - strand at 4691.730 kb on + strand at 4691.730 kb on + strand at 4691.731 kb on - strand at 4692.344 kb on + strand, within ABID97_RS22650 at 4692.575 kb on + strand, within ABID97_RS22650 at 4692.575 kb on + strand, within ABID97_RS22650 at 4692.576 kb on - strand, within ABID97_RS22650 at 4692.938 kb on + strand, within ABID97_RS22650 at 4692.938 kb on + strand, within ABID97_RS22650 at 4692.938 kb on + strand, within ABID97_RS22650 at 4692.939 kb on - strand, within ABID97_RS22650 at 4692.939 kb on - strand, within ABID97_RS22650 at 4692.939 kb on - strand, within ABID97_RS22650 at 4692.941 kb on + strand, within ABID97_RS22650 at 4692.941 kb on + strand, within ABID97_RS22650 at 4692.941 kb on + strand, within ABID97_RS22650 at 4692.942 kb on - strand, within ABID97_RS22650 at 4692.942 kb on - strand, within ABID97_RS22650 at 4693.187 kb on - strand, within ABID97_RS22650 at 4693.187 kb on - strand, within ABID97_RS22650 at 4693.250 kb on + strand, within ABID97_RS22650 at 4693.250 kb on + strand, within ABID97_RS22650 at 4693.251 kb on - strand, within ABID97_RS22650 at 4693.251 kb on - strand, within ABID97_RS22650 at 4693.251 kb on - strand, within ABID97_RS22650 at 4693.953 kb on + strand at 4693.953 kb on + strand at 4693.994 kb on + strand at 4693.995 kb on - strand at 4694.122 kb on + strand at 4694.123 kb on - strand at 4694.242 kb on + strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.243 kb on - strand, within ABID97_RS22660 at 4694.380 kb on + strand, within ABID97_RS22660 at 4694.380 kb on + strand, within ABID97_RS22660 at 4694.381 kb on - strand, within ABID97_RS22660 at 4694.447 kb on - strand, within ABID97_RS22660 at 4694.447 kb on - strand, within ABID97_RS22660 at 4694.447 kb on - strand, within ABID97_RS22660
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 4,691,627 - -0.5 4,691,730 + +0.1 4,691,730 + -0.6 4,691,731 - +0.5 4,692,344 + ABID97_RS22650 0.33 -0.6 4,692,575 + ABID97_RS22650 0.47 +0.1 4,692,575 + ABID97_RS22650 0.47 -1.1 4,692,576 - ABID97_RS22650 0.47 -0.3 4,692,938 + ABID97_RS22650 0.69 -0.3 4,692,938 + ABID97_RS22650 0.69 -0.1 4,692,938 + ABID97_RS22650 0.69 +0.1 4,692,939 - ABID97_RS22650 0.69 +0.1 4,692,939 - ABID97_RS22650 0.69 +0.3 4,692,939 - ABID97_RS22650 0.69 -0.7 4,692,941 + ABID97_RS22650 0.69 -0.1 4,692,941 + ABID97_RS22650 0.69 -0.4 4,692,941 + ABID97_RS22650 0.69 -2.0 4,692,942 - ABID97_RS22650 0.69 -0.6 4,692,942 - ABID97_RS22650 0.69 -0.2 4,693,187 - ABID97_RS22650 0.84 -0.1 4,693,187 - ABID97_RS22650 0.84 -0.8 4,693,250 + ABID97_RS22650 0.88 -0.3 4,693,250 + ABID97_RS22650 0.88 +0.9 4,693,251 - ABID97_RS22650 0.88 -0.3 4,693,251 - ABID97_RS22650 0.88 -1.4 4,693,251 - ABID97_RS22650 0.88 -0.5 4,693,953 + +0.2 4,693,953 + -0.1 4,693,994 + -0.5 4,693,995 - -0.0 4,694,122 + -0.1 4,694,123 - -0.9 4,694,242 + ABID97_RS22660 0.20 -0.6 4,694,243 - ABID97_RS22660 0.20 +1.2 4,694,243 - ABID97_RS22660 0.20 -2.1 4,694,243 - ABID97_RS22660 0.20 -0.4 4,694,243 - ABID97_RS22660 0.20 -0.3 4,694,243 - ABID97_RS22660 0.20 +0.3 4,694,380 + ABID97_RS22660 0.34 +0.4 4,694,380 + ABID97_RS22660 0.34 +0.9 4,694,381 - ABID97_RS22660 0.34 -0.2 4,694,447 - ABID97_RS22660 0.41 -0.0 4,694,447 - ABID97_RS22660 0.41 +0.1 4,694,447 - ABID97_RS22660 0.41 +0.3
Or see this region's nucleotide sequence