Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14690 and ABID97_RS14695 are separated by 97 nucleotides ABID97_RS14695 and ABID97_RS14700 are separated by 7 nucleotides ABID97_RS14700 and ABID97_RS14705 are separated by 46 nucleotides ABID97_RS14705 and ABID97_RS14710 are separated by 159 nucleotides
ABID97_RS14690: ABID97_RS14690 - DNA polymerase III subunit gamma/tau, at 3,056,456 to 3,058,309
_RS14690
ABID97_RS14695: ABID97_RS14695 - YbaB/EbfC family nucleoid-associated protein, at 3,058,407 to 3,058,739
_RS14695
ABID97_RS14700: ABID97_RS14700 - recombination mediator RecR, at 3,058,747 to 3,059,337
_RS14700
ABID97_RS14705: ABID97_RS14705 - MAPEG family protein, at 3,059,384 to 3,059,776
_RS14705
ABID97_RS14710: ABID97_RS14710 - ABC transporter substrate-binding protein, at 3,059,936 to 3,060,970
_RS14710
Position (kb)
3058
3059
3060 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3058.372 kb on - strand at 3058.372 kb on - strand at 3058.372 kb on - strand at 3059.056 kb on + strand, within ABID97_RS14700 at 3059.057 kb on - strand, within ABID97_RS14700 at 3059.057 kb on - strand, within ABID97_RS14700 at 3059.057 kb on - strand, within ABID97_RS14700 at 3059.290 kb on + strand at 3059.291 kb on - strand at 3059.291 kb on - strand at 3059.411 kb on + strand at 3059.444 kb on + strand, within ABID97_RS14705 at 3059.657 kb on + strand, within ABID97_RS14705 at 3059.657 kb on + strand, within ABID97_RS14705 at 3059.657 kb on + strand, within ABID97_RS14705 at 3059.658 kb on - strand, within ABID97_RS14705 at 3059.678 kb on + strand, within ABID97_RS14705 at 3059.690 kb on + strand, within ABID97_RS14705 at 3059.690 kb on + strand, within ABID97_RS14705 at 3059.836 kb on - strand at 3059.959 kb on + strand at 3060.068 kb on + strand, within ABID97_RS14710 at 3060.068 kb on + strand, within ABID97_RS14710 at 3060.068 kb on + strand, within ABID97_RS14710 at 3060.069 kb on - strand, within ABID97_RS14710 at 3060.069 kb on - strand, within ABID97_RS14710 at 3060.069 kb on - strand, within ABID97_RS14710 at 3060.069 kb on - strand, within ABID97_RS14710 at 3060.069 kb on - strand, within ABID97_RS14710 at 3060.069 kb on - strand, within ABID97_RS14710 at 3060.071 kb on + strand, within ABID97_RS14710 at 3060.071 kb on + strand, within ABID97_RS14710 at 3060.072 kb on - strand, within ABID97_RS14710 at 3060.210 kb on - strand, within ABID97_RS14710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 3,058,372 - +1.1 3,058,372 - +0.0 3,058,372 - +0.1 3,059,056 + ABID97_RS14700 0.52 -0.9 3,059,057 - ABID97_RS14700 0.52 -1.9 3,059,057 - ABID97_RS14700 0.52 -1.5 3,059,057 - ABID97_RS14700 0.52 -0.5 3,059,290 + -0.8 3,059,291 - +0.5 3,059,291 - -0.7 3,059,411 + +0.2 3,059,444 + ABID97_RS14705 0.15 +1.0 3,059,657 + ABID97_RS14705 0.69 -0.1 3,059,657 + ABID97_RS14705 0.69 -0.1 3,059,657 + ABID97_RS14705 0.69 +0.4 3,059,658 - ABID97_RS14705 0.70 -0.1 3,059,678 + ABID97_RS14705 0.75 +0.2 3,059,690 + ABID97_RS14705 0.78 +2.4 3,059,690 + ABID97_RS14705 0.78 -0.2 3,059,836 - +0.9 3,059,959 + +0.4 3,060,068 + ABID97_RS14710 0.13 -0.2 3,060,068 + ABID97_RS14710 0.13 -0.0 3,060,068 + ABID97_RS14710 0.13 -0.3 3,060,069 - ABID97_RS14710 0.13 +0.3 3,060,069 - ABID97_RS14710 0.13 +0.0 3,060,069 - ABID97_RS14710 0.13 +0.8 3,060,069 - ABID97_RS14710 0.13 -0.1 3,060,069 - ABID97_RS14710 0.13 -0.9 3,060,069 - ABID97_RS14710 0.13 +0.2 3,060,071 + ABID97_RS14710 0.13 +0.0 3,060,071 + ABID97_RS14710 0.13 -0.0 3,060,072 - ABID97_RS14710 0.13 +0.1 3,060,210 - ABID97_RS14710 0.26 -0.3
Or see this region's nucleotide sequence