Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14155 and ABID97_RS14160 are separated by 4 nucleotides ABID97_RS14160 and ABID97_RS14165 overlap by 4 nucleotides ABID97_RS14165 and ABID97_RS14170 are separated by 30 nucleotides
ABID97_RS14155: ABID97_RS14155 - dihydrolipoyl dehydrogenase, at 2,944,231 to 2,945,661
_RS14155
ABID97_RS14160: ABID97_RS14160 - cell division protein ZapE, at 2,945,666 to 2,946,766
_RS14160
ABID97_RS14165: ABID97_RS14165 - hypothetical protein, at 2,946,763 to 2,947,434
_RS14165
ABID97_RS14170: ABID97_RS14170 - protein phosphatase 2C domain-containing protein, at 2,947,465 to 2,948,235
_RS14170
Position (kb)
2945
2946
2947 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2945.687 kb on + strand at 2945.687 kb on + strand at 2945.688 kb on - strand at 2945.849 kb on + strand, within ABID97_RS14160 at 2945.849 kb on + strand, within ABID97_RS14160 at 2945.849 kb on + strand, within ABID97_RS14160 at 2945.850 kb on - strand, within ABID97_RS14160 at 2946.035 kb on + strand, within ABID97_RS14160 at 2946.035 kb on + strand, within ABID97_RS14160 at 2946.036 kb on - strand, within ABID97_RS14160 at 2946.296 kb on + strand, within ABID97_RS14160 at 2946.297 kb on - strand, within ABID97_RS14160 at 2946.297 kb on - strand, within ABID97_RS14160 at 2946.297 kb on - strand, within ABID97_RS14160 at 2946.297 kb on - strand, within ABID97_RS14160 at 2946.297 kb on - strand, within ABID97_RS14160 at 2946.297 kb on - strand, within ABID97_RS14160 at 2946.485 kb on + strand, within ABID97_RS14160 at 2946.596 kb on + strand, within ABID97_RS14160 at 2946.650 kb on + strand, within ABID97_RS14160 at 2946.651 kb on - strand, within ABID97_RS14160 at 2947.101 kb on + strand, within ABID97_RS14165 at 2947.589 kb on + strand, within ABID97_RS14170 at 2947.590 kb on - strand, within ABID97_RS14170 at 2947.622 kb on + strand, within ABID97_RS14170 at 2947.623 kb on - strand, within ABID97_RS14170 at 2947.682 kb on + strand, within ABID97_RS14170 at 2947.682 kb on + strand, within ABID97_RS14170 at 2947.683 kb on - strand, within ABID97_RS14170 at 2947.683 kb on - strand, within ABID97_RS14170
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 2,945,687 + -1.0 2,945,687 + -2.0 2,945,688 - -3.4 2,945,849 + ABID97_RS14160 0.17 -2.1 2,945,849 + ABID97_RS14160 0.17 -1.6 2,945,849 + ABID97_RS14160 0.17 -0.6 2,945,850 - ABID97_RS14160 0.17 -0.2 2,946,035 + ABID97_RS14160 0.34 -1.6 2,946,035 + ABID97_RS14160 0.34 -1.8 2,946,036 - ABID97_RS14160 0.34 -2.1 2,946,296 + ABID97_RS14160 0.57 -1.7 2,946,297 - ABID97_RS14160 0.57 -1.2 2,946,297 - ABID97_RS14160 0.57 -0.4 2,946,297 - ABID97_RS14160 0.57 -0.6 2,946,297 - ABID97_RS14160 0.57 -1.9 2,946,297 - ABID97_RS14160 0.57 -2.1 2,946,297 - ABID97_RS14160 0.57 -1.6 2,946,485 + ABID97_RS14160 0.74 -2.2 2,946,596 + ABID97_RS14160 0.84 -1.1 2,946,650 + ABID97_RS14160 0.89 -3.0 2,946,651 - ABID97_RS14160 0.89 -1.4 2,947,101 + ABID97_RS14165 0.50 +0.8 2,947,589 + ABID97_RS14170 0.16 -0.5 2,947,590 - ABID97_RS14170 0.16 -0.3 2,947,622 + ABID97_RS14170 0.20 -0.4 2,947,623 - ABID97_RS14170 0.20 +2.8 2,947,682 + ABID97_RS14170 0.28 +0.8 2,947,682 + ABID97_RS14170 0.28 +0.5 2,947,683 - ABID97_RS14170 0.28 +0.0 2,947,683 - ABID97_RS14170 0.28 +0.3
Or see this region's nucleotide sequence