Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08770 and ABID97_RS08775 overlap by 7 nucleotides ABID97_RS08775 and ABID97_RS08780 are separated by 12 nucleotides ABID97_RS08780 and ABID97_RS08785 are separated by 24 nucleotides
ABID97_RS08770: ABID97_RS08770 - histidinol-phosphate transaminase, at 1,835,975 to 1,837,063
_RS08770
ABID97_RS08775: ABID97_RS08775 - ribosome small subunit-dependent GTPase A, at 1,837,057 to 1,838,010
_RS08775
ABID97_RS08780: ABID97_RS08780 - 4a-hydroxytetrahydrobiopterin dehydratase, at 1,838,023 to 1,838,370
_RS08780
ABID97_RS08785: ABID97_RS08785 - M48 family metallopeptidase, at 1,838,395 to 1,839,660
_RS08785
Position (kb) 1837
1838
1839 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1836.317 kb on + strand, within ABID97_RS08770 at 1836.318 kb on - strand, within ABID97_RS08770 at 1836.348 kb on - strand, within ABID97_RS08770 at 1836.548 kb on + strand, within ABID97_RS08770 at 1836.548 kb on + strand, within ABID97_RS08770 at 1836.548 kb on + strand, within ABID97_RS08770 at 1836.548 kb on + strand, within ABID97_RS08770 at 1836.549 kb on - strand, within ABID97_RS08770 at 1836.549 kb on - strand, within ABID97_RS08770 at 1836.549 kb on - strand, within ABID97_RS08770 at 1836.603 kb on + strand, within ABID97_RS08770 at 1836.603 kb on + strand, within ABID97_RS08770 at 1836.604 kb on - strand, within ABID97_RS08770 at 1836.604 kb on - strand, within ABID97_RS08770 at 1836.604 kb on - strand, within ABID97_RS08770 at 1836.723 kb on - strand, within ABID97_RS08770 at 1836.983 kb on + strand at 1836.984 kb on - strand at 1837.197 kb on - strand, within ABID97_RS08775 at 1837.197 kb on - strand, within ABID97_RS08775 at 1837.334 kb on + strand, within ABID97_RS08775 at 1838.132 kb on + strand, within ABID97_RS08780 at 1838.132 kb on + strand, within ABID97_RS08780 at 1838.132 kb on + strand, within ABID97_RS08780 at 1838.132 kb on + strand, within ABID97_RS08780 at 1838.133 kb on - strand, within ABID97_RS08780 at 1838.213 kb on + strand, within ABID97_RS08780 at 1838.213 kb on + strand, within ABID97_RS08780 at 1838.445 kb on - strand at 1838.445 kb on - strand at 1838.445 kb on - strand at 1838.447 kb on + strand at 1838.447 kb on + strand at 1838.447 kb on + strand at 1838.448 kb on - strand at 1838.448 kb on - strand at 1838.498 kb on + strand at 1838.499 kb on - strand at 1838.553 kb on - strand, within ABID97_RS08785 at 1838.553 kb on - strand, within ABID97_RS08785 at 1838.553 kb on - strand, within ABID97_RS08785 at 1838.708 kb on + strand, within ABID97_RS08785 at 1838.876 kb on + strand, within ABID97_RS08785 at 1838.915 kb on + strand, within ABID97_RS08785 at 1838.916 kb on - strand, within ABID97_RS08785
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 1,836,317 + ABID97_RS08770 0.31 +1.0 1,836,318 - ABID97_RS08770 0.31 +0.6 1,836,348 - ABID97_RS08770 0.34 +2.1 1,836,548 + ABID97_RS08770 0.53 -0.2 1,836,548 + ABID97_RS08770 0.53 -0.7 1,836,548 + ABID97_RS08770 0.53 -1.5 1,836,548 + ABID97_RS08770 0.53 +0.1 1,836,549 - ABID97_RS08770 0.53 +0.0 1,836,549 - ABID97_RS08770 0.53 -0.3 1,836,549 - ABID97_RS08770 0.53 -0.1 1,836,603 + ABID97_RS08770 0.58 -0.3 1,836,603 + ABID97_RS08770 0.58 -0.2 1,836,604 - ABID97_RS08770 0.58 +0.2 1,836,604 - ABID97_RS08770 0.58 +0.4 1,836,604 - ABID97_RS08770 0.58 +0.1 1,836,723 - ABID97_RS08770 0.69 +0.1 1,836,983 + +0.1 1,836,984 - +0.3 1,837,197 - ABID97_RS08775 0.15 -0.7 1,837,197 - ABID97_RS08775 0.15 -1.3 1,837,334 + ABID97_RS08775 0.29 -2.3 1,838,132 + ABID97_RS08780 0.31 +0.5 1,838,132 + ABID97_RS08780 0.31 -0.4 1,838,132 + ABID97_RS08780 0.31 -0.3 1,838,132 + ABID97_RS08780 0.31 +0.1 1,838,133 - ABID97_RS08780 0.32 +0.1 1,838,213 + ABID97_RS08780 0.55 -1.8 1,838,213 + ABID97_RS08780 0.55 +0.3 1,838,445 - -0.1 1,838,445 - +0.4 1,838,445 - -0.5 1,838,447 + -0.0 1,838,447 + -1.2 1,838,447 + -0.1 1,838,448 - -0.5 1,838,448 - +0.1 1,838,498 + +0.3 1,838,499 - -0.6 1,838,553 - ABID97_RS08785 0.12 -0.1 1,838,553 - ABID97_RS08785 0.12 +0.3 1,838,553 - ABID97_RS08785 0.12 +0.0 1,838,708 + ABID97_RS08785 0.25 -0.4 1,838,876 + ABID97_RS08785 0.38 +0.9 1,838,915 + ABID97_RS08785 0.41 -0.9 1,838,916 - ABID97_RS08785 0.41 +0.0
Or see this region's nucleotide sequence