Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08675 and ABID97_RS08680 are separated by 15 nucleotides ABID97_RS08680 and ABID97_RS08685 overlap by 34 nucleotides ABID97_RS08685 and ABID97_RS08690 overlap by 4 nucleotides
ABID97_RS08675: ABID97_RS08675 - RNA polymerase sigma factor, at 1,820,034 to 1,821,332
_RS08675
ABID97_RS08680: ABID97_RS08680 - helix-turn-helix domain-containing protein, at 1,821,348 to 1,822,346
_RS08680
ABID97_RS08685: ABID97_RS08685 - DJ-1/PfpI family protein, at 1,822,313 to 1,822,939
_RS08685
ABID97_RS08690: ABID97_RS08690 - isochorismatase family protein, at 1,822,936 to 1,823,520
_RS08690
Position (kb)
1821
1822
1823 Strain fitness (log2 ratio)
-2
-1
0
1 at 1820.649 kb on + strand, within ABID97_RS08675 at 1820.649 kb on + strand, within ABID97_RS08675 at 1820.649 kb on + strand, within ABID97_RS08675 at 1820.649 kb on + strand, within ABID97_RS08675 at 1820.650 kb on - strand, within ABID97_RS08675 at 1820.650 kb on - strand, within ABID97_RS08675 at 1820.671 kb on - strand, within ABID97_RS08675 at 1820.671 kb on - strand, within ABID97_RS08675 at 1820.953 kb on - strand, within ABID97_RS08675 at 1820.953 kb on - strand, within ABID97_RS08675 at 1821.172 kb on - strand, within ABID97_RS08675 at 1821.172 kb on - strand, within ABID97_RS08675 at 1821.520 kb on + strand, within ABID97_RS08680 at 1821.521 kb on - strand, within ABID97_RS08680 at 1821.836 kb on - strand, within ABID97_RS08680 at 1822.315 kb on - strand at 1822.315 kb on - strand at 1822.315 kb on - strand at 1822.410 kb on + strand, within ABID97_RS08685 at 1822.410 kb on + strand, within ABID97_RS08685 at 1822.411 kb on - strand, within ABID97_RS08685 at 1822.411 kb on - strand, within ABID97_RS08685 at 1823.114 kb on + strand, within ABID97_RS08690 at 1823.114 kb on + strand, within ABID97_RS08690 at 1823.115 kb on - strand, within ABID97_RS08690 at 1823.115 kb on - strand, within ABID97_RS08690 at 1823.115 kb on - strand, within ABID97_RS08690
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 1,820,649 + ABID97_RS08675 0.47 +0.7 1,820,649 + ABID97_RS08675 0.47 -0.0 1,820,649 + ABID97_RS08675 0.47 -0.2 1,820,649 + ABID97_RS08675 0.47 -2.5 1,820,650 - ABID97_RS08675 0.47 -0.6 1,820,650 - ABID97_RS08675 0.47 +0.1 1,820,671 - ABID97_RS08675 0.49 +0.0 1,820,671 - ABID97_RS08675 0.49 +0.2 1,820,953 - ABID97_RS08675 0.71 +0.9 1,820,953 - ABID97_RS08675 0.71 -0.1 1,821,172 - ABID97_RS08675 0.88 +1.0 1,821,172 - ABID97_RS08675 0.88 -0.1 1,821,520 + ABID97_RS08680 0.17 +0.0 1,821,521 - ABID97_RS08680 0.17 -0.6 1,821,836 - ABID97_RS08680 0.49 -1.0 1,822,315 - -0.0 1,822,315 - +0.2 1,822,315 - -0.2 1,822,410 + ABID97_RS08685 0.15 -0.0 1,822,410 + ABID97_RS08685 0.15 +0.1 1,822,411 - ABID97_RS08685 0.16 -0.2 1,822,411 - ABID97_RS08685 0.16 +0.3 1,823,114 + ABID97_RS08690 0.30 +0.2 1,823,114 + ABID97_RS08690 0.30 -0.1 1,823,115 - ABID97_RS08690 0.31 -0.1 1,823,115 - ABID97_RS08690 0.31 -0.7 1,823,115 - ABID97_RS08690 0.31 +0.1
Or see this region's nucleotide sequence