Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01640 and ABID97_RS01645 are separated by 138 nucleotides ABID97_RS01645 and ABID97_RS01650 are separated by 12 nucleotides ABID97_RS01650 and ABID97_RS01655 are separated by 33 nucleotides
ABID97_RS01640: ABID97_RS01640 - hypothetical protein, at 322,733 to 323,587
_RS01640
ABID97_RS01645: ABID97_RS01645 - helix-turn-helix transcriptional regulator, at 323,726 to 324,460
_RS01645
ABID97_RS01650: ABID97_RS01650 - orotidine-5'-phosphate decarboxylase, at 324,473 to 325,297
_RS01650
ABID97_RS01655: ABID97_RS01655 - uracil-DNA glycosylase family protein, at 325,331 to 326,077
_RS01655
Position (kb) 323
324
325 Strain fitness (log2 ratio) -2
-1
0
1
2 at 322.734 kb on + strand at 322.734 kb on + strand at 322.734 kb on + strand at 322.734 kb on + strand at 322.734 kb on + strand at 322.734 kb on + strand at 322.735 kb on - strand at 322.735 kb on - strand at 322.735 kb on - strand at 322.887 kb on + strand, within ABID97_RS01640 at 322.887 kb on + strand, within ABID97_RS01640 at 322.887 kb on + strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.888 kb on - strand, within ABID97_RS01640 at 322.929 kb on + strand, within ABID97_RS01640 at 322.929 kb on + strand, within ABID97_RS01640 at 322.929 kb on + strand, within ABID97_RS01640 at 323.701 kb on + strand at 323.789 kb on + strand at 323.789 kb on + strand at 323.789 kb on + strand at 323.790 kb on - strand at 323.790 kb on - strand at 324.059 kb on + strand, within ABID97_RS01645 at 324.228 kb on - strand, within ABID97_RS01645 at 324.228 kb on - strand, within ABID97_RS01645 at 324.230 kb on + strand, within ABID97_RS01645 at 324.230 kb on + strand, within ABID97_RS01645 at 324.789 kb on + strand, within ABID97_RS01650 at 325.108 kb on - strand, within ABID97_RS01650 at 325.176 kb on + strand, within ABID97_RS01650 at 325.176 kb on + strand, within ABID97_RS01650 at 325.310 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 322,734 + -0.5 322,734 + -0.0 322,734 + -0.4 322,734 + +0.2 322,734 + -0.1 322,734 + +0.6 322,735 - -0.1 322,735 - +0.3 322,735 - +0.1 322,887 + ABID97_RS01640 0.18 +0.5 322,887 + ABID97_RS01640 0.18 +0.8 322,887 + ABID97_RS01640 0.18 -0.0 322,888 - ABID97_RS01640 0.18 -0.1 322,888 - ABID97_RS01640 0.18 +1.7 322,888 - ABID97_RS01640 0.18 +0.2 322,888 - ABID97_RS01640 0.18 +1.7 322,888 - ABID97_RS01640 0.18 +0.5 322,888 - ABID97_RS01640 0.18 -1.0 322,888 - ABID97_RS01640 0.18 -0.1 322,888 - ABID97_RS01640 0.18 -0.3 322,888 - ABID97_RS01640 0.18 -0.1 322,929 + ABID97_RS01640 0.23 -0.2 322,929 + ABID97_RS01640 0.23 +0.1 322,929 + ABID97_RS01640 0.23 -0.1 323,701 + -0.8 323,789 + -0.9 323,789 + -0.0 323,789 + -0.7 323,790 - -1.3 323,790 - -0.5 324,059 + ABID97_RS01645 0.45 -0.5 324,228 - ABID97_RS01645 0.68 -0.8 324,228 - ABID97_RS01645 0.68 -1.9 324,230 + ABID97_RS01645 0.69 -1.3 324,230 + ABID97_RS01645 0.69 -0.5 324,789 + ABID97_RS01650 0.38 +0.1 325,108 - ABID97_RS01650 0.77 +1.5 325,176 + ABID97_RS01650 0.85 -0.5 325,176 + ABID97_RS01650 0.85 +2.5 325,310 + +0.5
Or see this region's nucleotide sequence