Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4314 and EX28DRAFT_4315 overlap by 1 nucleotides EX28DRAFT_4315 and EX28DRAFT_4316 overlap by 4 nucleotides EX28DRAFT_4316 and EX28DRAFT_4317 are separated by 63 nucleotides EX28DRAFT_4317 and EX28DRAFT_4318 are separated by 367 nucleotides
EX28DRAFT_4314: EX28DRAFT_4314 - Bacterial putative lipoprotein (DUF940), at 118,033 to 120,129
_4314
EX28DRAFT_4315: EX28DRAFT_4315 - Capsule biosynthesis GfcC, at 120,129 to 120,866
_4315
EX28DRAFT_4316: EX28DRAFT_4316 - Group 4 capsule polysaccharide formation lipoprotein gfcB, at 120,863 to 121,501
_4316
EX28DRAFT_4317: EX28DRAFT_4317 - Exopolysaccharide production protein YjbE, at 121,565 to 121,807
_4317
EX28DRAFT_4318: EX28DRAFT_4318 - Glucose-6-phosphate isomerase, at 122,175 to 123,824
_4318
Position (kb)
120
121
122 Strain fitness (log2 ratio)
-1
0
1
2 at 119.883 kb on + strand, within EX28DRAFT_4314 at 119.914 kb on + strand, within EX28DRAFT_4314 at 119.915 kb on - strand, within EX28DRAFT_4314 at 119.915 kb on - strand, within EX28DRAFT_4314 at 119.915 kb on - strand, within EX28DRAFT_4314 at 119.934 kb on - strand at 119.936 kb on + strand at 119.937 kb on - strand at 119.961 kb on - strand at 119.964 kb on + strand at 119.971 kb on - strand at 120.013 kb on + strand at 120.111 kb on - strand at 120.116 kb on + strand at 120.116 kb on + strand at 120.185 kb on - strand at 120.239 kb on + strand, within EX28DRAFT_4315 at 120.240 kb on - strand, within EX28DRAFT_4315 at 120.258 kb on - strand, within EX28DRAFT_4315 at 120.266 kb on - strand, within EX28DRAFT_4315 at 120.316 kb on + strand, within EX28DRAFT_4315 at 120.458 kb on + strand, within EX28DRAFT_4315 at 120.458 kb on + strand, within EX28DRAFT_4315 at 120.459 kb on - strand, within EX28DRAFT_4315 at 120.459 kb on - strand, within EX28DRAFT_4315 at 120.459 kb on - strand, within EX28DRAFT_4315 at 120.460 kb on + strand, within EX28DRAFT_4315 at 120.921 kb on + strand at 121.102 kb on + strand, within EX28DRAFT_4316 at 121.103 kb on - strand, within EX28DRAFT_4316 at 121.103 kb on - strand, within EX28DRAFT_4316 at 121.344 kb on + strand, within EX28DRAFT_4316 at 121.345 kb on - strand, within EX28DRAFT_4316 at 121.345 kb on - strand, within EX28DRAFT_4316 at 121.356 kb on + strand, within EX28DRAFT_4316 at 121.356 kb on + strand, within EX28DRAFT_4316 at 121.391 kb on + strand, within EX28DRAFT_4316 at 121.392 kb on - strand, within EX28DRAFT_4316 at 121.392 kb on - strand, within EX28DRAFT_4316 at 121.441 kb on + strand at 121.526 kb on - strand at 121.796 kb on + strand at 121.881 kb on - strand at 122.172 kb on + strand at 122.176 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 119,883 + EX28DRAFT_4314 0.88 +0.4 119,914 + EX28DRAFT_4314 0.90 -0.6 119,915 - EX28DRAFT_4314 0.90 +2.3 119,915 - EX28DRAFT_4314 0.90 -0.1 119,915 - EX28DRAFT_4314 0.90 -0.3 119,934 - -0.7 119,936 + -0.1 119,937 - +0.5 119,961 - +0.8 119,964 + +0.3 119,971 - +0.3 120,013 + +0.1 120,111 - -0.4 120,116 + -0.6 120,116 + +1.3 120,185 - -0.0 120,239 + EX28DRAFT_4315 0.15 +0.2 120,240 - EX28DRAFT_4315 0.15 -0.2 120,258 - EX28DRAFT_4315 0.17 -0.2 120,266 - EX28DRAFT_4315 0.19 +1.0 120,316 + EX28DRAFT_4315 0.25 -0.1 120,458 + EX28DRAFT_4315 0.45 +1.1 120,458 + EX28DRAFT_4315 0.45 +0.3 120,459 - EX28DRAFT_4315 0.45 +0.1 120,459 - EX28DRAFT_4315 0.45 +0.0 120,459 - EX28DRAFT_4315 0.45 +0.4 120,460 + EX28DRAFT_4315 0.45 -0.5 120,921 + -0.8 121,102 + EX28DRAFT_4316 0.37 +0.8 121,103 - EX28DRAFT_4316 0.38 -0.5 121,103 - EX28DRAFT_4316 0.38 +0.2 121,344 + EX28DRAFT_4316 0.75 +0.7 121,345 - EX28DRAFT_4316 0.75 +2.6 121,345 - EX28DRAFT_4316 0.75 -1.0 121,356 + EX28DRAFT_4316 0.77 -0.4 121,356 + EX28DRAFT_4316 0.77 +0.4 121,391 + EX28DRAFT_4316 0.83 +1.7 121,392 - EX28DRAFT_4316 0.83 +1.1 121,392 - EX28DRAFT_4316 0.83 -0.4 121,441 + -1.0 121,526 - -0.2 121,796 + -0.7 121,881 - -1.3 122,172 + +0.1 122,176 + +0.2
Or see this region's nucleotide sequence