Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4306 and EX28DRAFT_4307 are separated by 114 nucleotides EX28DRAFT_4307 and EX28DRAFT_4308 are separated by 71 nucleotides
EX28DRAFT_4306: EX28DRAFT_4306 - Maltose operon periplasmic protein precursor (MalM), at 109,200 to 110,153
_4306
EX28DRAFT_4307: EX28DRAFT_4307 - Maltoporin (phage lambda and maltose receptor), at 110,268 to 111,581
_4307
EX28DRAFT_4308: EX28DRAFT_4308 - ABC-type sugar transport systems, ATPase components, at 111,653 to 112,762
_4308
Position (kb)
110
111
112 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 109.337 kb on - strand, within EX28DRAFT_4306 at 109.337 kb on - strand, within EX28DRAFT_4306 at 109.432 kb on + strand, within EX28DRAFT_4306 at 109.451 kb on + strand, within EX28DRAFT_4306 at 109.456 kb on - strand, within EX28DRAFT_4306 at 109.520 kb on + strand, within EX28DRAFT_4306 at 109.520 kb on + strand, within EX28DRAFT_4306 at 109.632 kb on - strand, within EX28DRAFT_4306 at 109.637 kb on + strand, within EX28DRAFT_4306 at 109.637 kb on + strand, within EX28DRAFT_4306 at 109.651 kb on - strand, within EX28DRAFT_4306 at 109.681 kb on + strand, within EX28DRAFT_4306 at 109.681 kb on + strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 110.157 kb on + strand at 110.157 kb on + strand at 110.158 kb on - strand at 110.158 kb on - strand at 110.158 kb on - strand at 110.161 kb on - strand at 110.197 kb on + strand at 110.243 kb on - strand at 110.250 kb on + strand at 110.251 kb on - strand at 110.251 kb on - strand at 110.269 kb on + strand at 110.269 kb on + strand at 110.369 kb on - strand at 110.493 kb on - strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.588 kb on - strand, within EX28DRAFT_4307 at 110.591 kb on + strand, within EX28DRAFT_4307 at 110.653 kb on + strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.781 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.890 kb on + strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.149 kb on - strand, within EX28DRAFT_4307 at 111.152 kb on - strand, within EX28DRAFT_4307 at 111.307 kb on + strand, within EX28DRAFT_4307 at 111.329 kb on - strand, within EX28DRAFT_4307 at 111.383 kb on - strand, within EX28DRAFT_4307 at 111.409 kb on + strand, within EX28DRAFT_4307 at 111.410 kb on - strand, within EX28DRAFT_4307 at 111.410 kb on - strand, within EX28DRAFT_4307 at 111.488 kb on - strand at 111.584 kb on + strand at 111.585 kb on - strand at 111.655 kb on - strand at 111.671 kb on - strand at 111.671 kb on - strand at 111.758 kb on + strand at 111.759 kb on - strand at 111.818 kb on - strand, within EX28DRAFT_4308 at 111.945 kb on - strand, within EX28DRAFT_4308 at 112.001 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.099 kb on - strand, within EX28DRAFT_4308 at 112.198 kb on - strand, within EX28DRAFT_4308 at 112.400 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.478 kb on - strand, within EX28DRAFT_4308 at 112.478 kb on - strand, within EX28DRAFT_4308 at 112.503 kb on + strand, within EX28DRAFT_4308 at 112.512 kb on + strand, within EX28DRAFT_4308 at 112.512 kb on + strand, within EX28DRAFT_4308 at 112.513 kb on - strand, within EX28DRAFT_4308
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 109,337 - EX28DRAFT_4306 0.14 +1.5 109,337 - EX28DRAFT_4306 0.14 +0.5 109,432 + EX28DRAFT_4306 0.24 -0.8 109,451 + EX28DRAFT_4306 0.26 -0.4 109,456 - EX28DRAFT_4306 0.27 +0.4 109,520 + EX28DRAFT_4306 0.34 -0.0 109,520 + EX28DRAFT_4306 0.34 -1.5 109,632 - EX28DRAFT_4306 0.45 +0.5 109,637 + EX28DRAFT_4306 0.46 -1.3 109,637 + EX28DRAFT_4306 0.46 -0.2 109,651 - EX28DRAFT_4306 0.47 -0.9 109,681 + EX28DRAFT_4306 0.50 -0.5 109,681 + EX28DRAFT_4306 0.50 -0.2 109,682 - EX28DRAFT_4306 0.51 +1.1 109,682 - EX28DRAFT_4306 0.51 +0.5 109,682 - EX28DRAFT_4306 0.51 -1.2 109,766 + EX28DRAFT_4306 0.59 +0.4 109,766 + EX28DRAFT_4306 0.59 +0.9 109,766 + EX28DRAFT_4306 0.59 -0.0 109,766 + EX28DRAFT_4306 0.59 -0.2 109,766 + EX28DRAFT_4306 0.59 +0.3 109,767 - EX28DRAFT_4306 0.59 +0.7 109,767 - EX28DRAFT_4306 0.59 -1.7 109,767 - EX28DRAFT_4306 0.59 +0.3 110,157 + -0.9 110,157 + -0.9 110,158 - -0.4 110,158 - -0.0 110,158 - -1.4 110,161 - -0.0 110,197 + -0.1 110,243 - +0.9 110,250 + -0.5 110,251 - +0.7 110,251 - -0.4 110,269 + -0.7 110,269 + -1.5 110,369 - -0.0 110,493 - EX28DRAFT_4307 0.17 +0.1 110,587 + EX28DRAFT_4307 0.24 -1.2 110,587 + EX28DRAFT_4307 0.24 +0.5 110,587 + EX28DRAFT_4307 0.24 -2.5 110,587 + EX28DRAFT_4307 0.24 +0.1 110,587 + EX28DRAFT_4307 0.24 -0.6 110,587 + EX28DRAFT_4307 0.24 +0.4 110,588 - EX28DRAFT_4307 0.24 -0.0 110,591 + EX28DRAFT_4307 0.25 +0.3 110,653 + EX28DRAFT_4307 0.29 +0.4 110,654 - EX28DRAFT_4307 0.29 -1.9 110,654 - EX28DRAFT_4307 0.29 +0.6 110,657 + EX28DRAFT_4307 0.30 +0.6 110,657 + EX28DRAFT_4307 0.30 -1.9 110,665 + EX28DRAFT_4307 0.30 +0.9 110,665 + EX28DRAFT_4307 0.30 -0.5 110,665 + EX28DRAFT_4307 0.30 -0.3 110,666 - EX28DRAFT_4307 0.30 -2.4 110,666 - EX28DRAFT_4307 0.30 -0.2 110,780 + EX28DRAFT_4307 0.39 +1.0 110,780 + EX28DRAFT_4307 0.39 +0.8 110,780 + EX28DRAFT_4307 0.39 +0.0 110,781 - EX28DRAFT_4307 0.39 -0.1 110,888 - EX28DRAFT_4307 0.47 -1.3 110,888 - EX28DRAFT_4307 0.47 +0.1 110,890 + EX28DRAFT_4307 0.47 -0.9 110,891 - EX28DRAFT_4307 0.47 -1.4 110,891 - EX28DRAFT_4307 0.47 -1.4 110,891 - EX28DRAFT_4307 0.47 -0.2 111,011 + EX28DRAFT_4307 0.57 -2.4 111,011 + EX28DRAFT_4307 0.57 +2.0 111,012 - EX28DRAFT_4307 0.57 -0.3 111,012 - EX28DRAFT_4307 0.57 -0.2 111,012 - EX28DRAFT_4307 0.57 -0.7 111,149 - EX28DRAFT_4307 0.67 -0.1 111,152 - EX28DRAFT_4307 0.67 +0.4 111,307 + EX28DRAFT_4307 0.79 +0.5 111,329 - EX28DRAFT_4307 0.81 -1.2 111,383 - EX28DRAFT_4307 0.85 -0.7 111,409 + EX28DRAFT_4307 0.87 -0.5 111,410 - EX28DRAFT_4307 0.87 -0.5 111,410 - EX28DRAFT_4307 0.87 -1.6 111,488 - +0.9 111,584 + -0.4 111,585 - -0.2 111,655 - +0.3 111,671 - -0.6 111,671 - -1.5 111,758 + +0.3 111,759 - -0.2 111,818 - EX28DRAFT_4308 0.15 -1.9 111,945 - EX28DRAFT_4308 0.26 +1.2 112,001 + EX28DRAFT_4308 0.31 -1.2 112,063 + EX28DRAFT_4308 0.37 +1.9 112,063 + EX28DRAFT_4308 0.37 -0.9 112,063 + EX28DRAFT_4308 0.37 -0.4 112,099 - EX28DRAFT_4308 0.40 -1.0 112,198 - EX28DRAFT_4308 0.49 +0.0 112,400 + EX28DRAFT_4308 0.67 +0.1 112,477 + EX28DRAFT_4308 0.74 +0.8 112,477 + EX28DRAFT_4308 0.74 +0.2 112,477 + EX28DRAFT_4308 0.74 -3.3 112,478 - EX28DRAFT_4308 0.74 +1.4 112,478 - EX28DRAFT_4308 0.74 +0.3 112,503 + EX28DRAFT_4308 0.77 +0.7 112,512 + EX28DRAFT_4308 0.77 -0.3 112,512 + EX28DRAFT_4308 0.77 +0.1 112,513 - EX28DRAFT_4308 0.77 +0.5
Or see this region's nucleotide sequence