Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4285 and EX28DRAFT_4286 are separated by 254 nucleotides EX28DRAFT_4286 and EX28DRAFT_4287 are separated by 1 nucleotides EX28DRAFT_4287 and EX28DRAFT_4288 overlap by 4 nucleotides
EX28DRAFT_4285: EX28DRAFT_4285 - ABC-type sugar transport system, periplasmic component, at 88,814 to 90,130
_4285
EX28DRAFT_4286: EX28DRAFT_4286 - ABC-type branched-chain amino acid transport systems, ATPase component, at 90,385 to 91,098
_4286
EX28DRAFT_4287: EX28DRAFT_4287 - ABC-type branched-chain amino acid transport systems, ATPase component, at 91,100 to 91,867
_4287
EX28DRAFT_4288: EX28DRAFT_4288 - ABC-type branched-chain amino acid transport system, permease component, at 91,864 to 93,141
_4288
Position (kb)
90
91
92 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 89.389 kb on - strand, within EX28DRAFT_4285 at 89.389 kb on - strand, within EX28DRAFT_4285 at 89.607 kb on + strand, within EX28DRAFT_4285 at 89.608 kb on - strand, within EX28DRAFT_4285 at 89.608 kb on - strand, within EX28DRAFT_4285 at 89.682 kb on + strand, within EX28DRAFT_4285 at 89.682 kb on + strand, within EX28DRAFT_4285 at 89.682 kb on + strand, within EX28DRAFT_4285 at 89.682 kb on + strand, within EX28DRAFT_4285 at 89.685 kb on + strand, within EX28DRAFT_4285 at 89.686 kb on - strand, within EX28DRAFT_4285 at 89.748 kb on + strand, within EX28DRAFT_4285 at 89.749 kb on - strand, within EX28DRAFT_4285 at 89.869 kb on - strand, within EX28DRAFT_4285 at 89.876 kb on + strand, within EX28DRAFT_4285 at 89.938 kb on - strand, within EX28DRAFT_4285 at 89.938 kb on - strand, within EX28DRAFT_4285 at 89.949 kb on + strand, within EX28DRAFT_4285 at 90.144 kb on - strand at 90.144 kb on - strand at 90.174 kb on + strand at 90.175 kb on - strand at 90.234 kb on + strand at 90.235 kb on - strand at 90.382 kb on + strand at 90.382 kb on + strand at 90.398 kb on + strand at 90.561 kb on + strand, within EX28DRAFT_4286 at 90.738 kb on - strand, within EX28DRAFT_4286 at 90.738 kb on - strand, within EX28DRAFT_4286 at 90.739 kb on + strand, within EX28DRAFT_4286 at 90.739 kb on + strand, within EX28DRAFT_4286 at 90.740 kb on - strand, within EX28DRAFT_4286 at 90.901 kb on - strand, within EX28DRAFT_4286 at 91.102 kb on - strand at 91.102 kb on - strand at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.195 kb on - strand, within EX28DRAFT_4287 at 91.199 kb on - strand, within EX28DRAFT_4287 at 91.704 kb on + strand, within EX28DRAFT_4287 at 91.853 kb on + strand at 91.853 kb on + strand at 91.988 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 89,389 - EX28DRAFT_4285 0.44 -0.9 89,389 - EX28DRAFT_4285 0.44 -0.7 89,607 + EX28DRAFT_4285 0.60 -0.3 89,608 - EX28DRAFT_4285 0.60 +0.2 89,608 - EX28DRAFT_4285 0.60 +0.6 89,682 + EX28DRAFT_4285 0.66 -0.3 89,682 + EX28DRAFT_4285 0.66 -0.3 89,682 + EX28DRAFT_4285 0.66 -2.6 89,682 + EX28DRAFT_4285 0.66 -0.6 89,685 + EX28DRAFT_4285 0.66 -1.6 89,686 - EX28DRAFT_4285 0.66 -1.5 89,748 + EX28DRAFT_4285 0.71 +0.1 89,749 - EX28DRAFT_4285 0.71 -2.1 89,869 - EX28DRAFT_4285 0.80 +1.5 89,876 + EX28DRAFT_4285 0.81 -0.4 89,938 - EX28DRAFT_4285 0.85 +1.3 89,938 - EX28DRAFT_4285 0.85 -1.2 89,949 + EX28DRAFT_4285 0.86 +1.7 90,144 - +0.7 90,144 - +2.1 90,174 + +1.0 90,175 - -0.4 90,234 + -0.9 90,235 - -1.1 90,382 + -2.9 90,382 + +0.3 90,398 + +0.3 90,561 + EX28DRAFT_4286 0.25 -1.8 90,738 - EX28DRAFT_4286 0.49 -0.7 90,738 - EX28DRAFT_4286 0.49 -0.0 90,739 + EX28DRAFT_4286 0.50 -1.1 90,739 + EX28DRAFT_4286 0.50 -1.9 90,740 - EX28DRAFT_4286 0.50 -0.7 90,901 - EX28DRAFT_4286 0.72 +0.1 91,102 - -1.5 91,102 - -1.3 91,194 + EX28DRAFT_4287 0.12 +0.8 91,194 + EX28DRAFT_4287 0.12 -0.8 91,194 + EX28DRAFT_4287 0.12 +0.8 91,194 + EX28DRAFT_4287 0.12 +1.1 91,195 - EX28DRAFT_4287 0.12 -1.2 91,199 - EX28DRAFT_4287 0.13 +0.4 91,704 + EX28DRAFT_4287 0.79 +0.8 91,853 + -0.0 91,853 + -0.0 91,988 + +0.4
Or see this region's nucleotide sequence