Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4022

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4021 and EX28DRAFT_4022 overlap by 7 nucleotidesEX28DRAFT_4022 and EX28DRAFT_4023 are separated by 222 nucleotides EX28DRAFT_4021: EX28DRAFT_4021 - Uncharacterized protein containing a von Willebrand factor type A (vWA) domain, at 230,822 to 232,273 _4021 EX28DRAFT_4022: EX28DRAFT_4022 - MoxR-like ATPases, at 232,267 to 233,763 _4022 EX28DRAFT_4023: EX28DRAFT_4023 - potassium uptake protein, at 233,986 to 235,854 _4023 Position (kb) 232 233 234Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 231.292 kb on + strand, within EX28DRAFT_4021at 231.439 kb on - strand, within EX28DRAFT_4021at 231.669 kb on + strand, within EX28DRAFT_4021at 231.787 kb on + strand, within EX28DRAFT_4021at 231.788 kb on - strand, within EX28DRAFT_4021at 231.788 kb on - strand, within EX28DRAFT_4021at 231.899 kb on - strand, within EX28DRAFT_4021at 232.009 kb on + strand, within EX28DRAFT_4021at 232.147 kb on + strandat 232.147 kb on + strandat 232.147 kb on + strandat 232.148 kb on - strandat 232.252 kb on + strandat 232.253 kb on - strandat 232.331 kb on - strandat 232.347 kb on + strandat 232.425 kb on + strand, within EX28DRAFT_4022at 232.624 kb on - strand, within EX28DRAFT_4022at 232.641 kb on + strand, within EX28DRAFT_4022at 232.641 kb on + strand, within EX28DRAFT_4022at 233.024 kb on + strand, within EX28DRAFT_4022at 233.024 kb on + strand, within EX28DRAFT_4022at 233.024 kb on + strand, within EX28DRAFT_4022at 233.024 kb on + strand, within EX28DRAFT_4022at 233.025 kb on - strand, within EX28DRAFT_4022at 233.025 kb on - strand, within EX28DRAFT_4022at 233.025 kb on - strand, within EX28DRAFT_4022at 233.026 kb on - strand, within EX28DRAFT_4022at 233.066 kb on + strand, within EX28DRAFT_4022at 233.066 kb on + strand, within EX28DRAFT_4022at 233.067 kb on - strand, within EX28DRAFT_4022at 233.067 kb on - strand, within EX28DRAFT_4022at 233.067 kb on - strand, within EX28DRAFT_4022at 233.067 kb on - strand, within EX28DRAFT_4022at 233.129 kb on + strand, within EX28DRAFT_4022at 233.129 kb on + strand, within EX28DRAFT_4022at 233.129 kb on + strand, within EX28DRAFT_4022at 233.261 kb on + strand, within EX28DRAFT_4022at 233.262 kb on - strand, within EX28DRAFT_4022at 233.263 kb on + strand, within EX28DRAFT_4022at 233.453 kb on + strand, within EX28DRAFT_4022at 233.453 kb on + strand, within EX28DRAFT_4022at 233.552 kb on + strand, within EX28DRAFT_4022at 233.665 kb on + strandat 233.766 kb on + strandat 233.766 kb on + strandat 233.766 kb on + strandat 233.766 kb on + strandat 233.766 kb on + strandat 233.811 kb on - strandat 233.834 kb on + strandat 233.870 kb on - strandat 233.875 kb on - strandat 233.889 kb on + strandat 233.920 kb on - strandat 233.920 kb on - strandat 233.920 kb on - strandat 233.920 kb on - strandat 233.981 kb on - strandat 233.985 kb on + strandat 233.986 kb on - strandat 233.997 kb on + strandat 234.000 kb on + strandat 234.000 kb on + strandat 234.000 kb on + strandat 234.001 kb on - strandat 234.021 kb on - strandat 234.075 kb on + strandat 234.187 kb on + strand, within EX28DRAFT_4023at 234.187 kb on + strand, within EX28DRAFT_4023at 234.188 kb on - strand, within EX28DRAFT_4023at 234.188 kb on - strand, within EX28DRAFT_4023at 234.262 kb on - strand, within EX28DRAFT_4023at 234.265 kb on - strand, within EX28DRAFT_4023at 234.488 kb on + strand, within EX28DRAFT_4023at 234.489 kb on - strand, within EX28DRAFT_4023at 234.679 kb on + strand, within EX28DRAFT_4023at 234.680 kb on - strand, within EX28DRAFT_4023at 234.729 kb on + strand, within EX28DRAFT_4023

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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231,292 + EX28DRAFT_4021 0.32 +1.5
231,439 - EX28DRAFT_4021 0.42 +2.9
231,669 + EX28DRAFT_4021 0.58 +0.5
231,787 + EX28DRAFT_4021 0.66 +0.4
231,788 - EX28DRAFT_4021 0.67 -0.1
231,788 - EX28DRAFT_4021 0.67 +1.2
231,899 - EX28DRAFT_4021 0.74 -0.4
232,009 + EX28DRAFT_4021 0.82 -1.9
232,147 + -0.3
232,147 + -0.1
232,147 + +0.5
232,148 - +0.6
232,252 + -1.7
232,253 - +0.3
232,331 - +0.5
232,347 + -0.1
232,425 + EX28DRAFT_4022 0.11 -0.5
232,624 - EX28DRAFT_4022 0.24 -0.1
232,641 + EX28DRAFT_4022 0.25 +0.4
232,641 + EX28DRAFT_4022 0.25 -2.0
233,024 + EX28DRAFT_4022 0.51 +0.2
233,024 + EX28DRAFT_4022 0.51 +0.9
233,024 + EX28DRAFT_4022 0.51 -0.1
233,024 + EX28DRAFT_4022 0.51 -0.6
233,025 - EX28DRAFT_4022 0.51 +1.2
233,025 - EX28DRAFT_4022 0.51 +0.6
233,025 - EX28DRAFT_4022 0.51 +0.9
233,026 - EX28DRAFT_4022 0.51 +0.7
233,066 + EX28DRAFT_4022 0.53 -0.7
233,066 + EX28DRAFT_4022 0.53 -3.5
233,067 - EX28DRAFT_4022 0.53 -0.2
233,067 - EX28DRAFT_4022 0.53 -2.0
233,067 - EX28DRAFT_4022 0.53 +0.5
233,067 - EX28DRAFT_4022 0.53 +0.2
233,129 + EX28DRAFT_4022 0.58 -1.0
233,129 + EX28DRAFT_4022 0.58 -0.5
233,129 + EX28DRAFT_4022 0.58 -0.1
233,261 + EX28DRAFT_4022 0.66 -0.8
233,262 - EX28DRAFT_4022 0.66 -0.1
233,263 + EX28DRAFT_4022 0.67 -1.7
233,453 + EX28DRAFT_4022 0.79 -0.1
233,453 + EX28DRAFT_4022 0.79 -0.4
233,552 + EX28DRAFT_4022 0.86 -0.3
233,665 + +0.1
233,766 + +1.0
233,766 + +0.5
233,766 + -0.5
233,766 + +0.1
233,766 + -0.8
233,811 - -0.0
233,834 + +0.1
233,870 - -0.3
233,875 - -0.6
233,889 + +1.1
233,920 - -0.5
233,920 - -0.3
233,920 - -0.3
233,920 - +2.8
233,981 - -0.1
233,985 + +0.0
233,986 - +0.8
233,997 + -2.1
234,000 + -0.6
234,000 + +0.4
234,000 + -1.0
234,001 - +0.7
234,021 - -0.4
234,075 + +0.2
234,187 + EX28DRAFT_4023 0.11 +0.2
234,187 + EX28DRAFT_4023 0.11 -3.3
234,188 - EX28DRAFT_4023 0.11 -1.9
234,188 - EX28DRAFT_4023 0.11 -0.6
234,262 - EX28DRAFT_4023 0.15 +0.5
234,265 - EX28DRAFT_4023 0.15 -0.9
234,488 + EX28DRAFT_4023 0.27 -0.7
234,489 - EX28DRAFT_4023 0.27 +2.1
234,679 + EX28DRAFT_4023 0.37 +0.3
234,680 - EX28DRAFT_4023 0.37 -1.0
234,729 + EX28DRAFT_4023 0.40 -0.0

Or see this region's nucleotide sequence