Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3664 and EX28DRAFT_3665 are separated by 48 nucleotides EX28DRAFT_3665 and EX28DRAFT_3666 are separated by 106 nucleotides
EX28DRAFT_3664: EX28DRAFT_3664 - sugar efflux transporter, at 330,808 to 331,986
_3664
EX28DRAFT_3665: EX28DRAFT_3665 - Cytochrome b(N-terminal)/b6/petB, at 332,035 to 332,616
_3665
EX28DRAFT_3666: EX28DRAFT_3666 - cation diffusion facilitator family transporter, at 332,723 to 333,613
_3666
Position (kb) 332
333 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 331.114 kb on + strand, within EX28DRAFT_3664 at 331.310 kb on - strand, within EX28DRAFT_3664 at 331.310 kb on - strand, within EX28DRAFT_3664 at 331.318 kb on - strand, within EX28DRAFT_3664 at 331.470 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.507 kb on + strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.508 kb on - strand, within EX28DRAFT_3664 at 331.518 kb on + strand, within EX28DRAFT_3664 at 331.624 kb on + strand, within EX28DRAFT_3664 at 332.046 kb on - strand at 332.052 kb on - strand at 332.052 kb on - strand at 332.052 kb on - strand at 332.056 kb on - strand at 332.079 kb on - strand at 332.079 kb on - strand at 332.082 kb on + strand at 332.082 kb on + strand at 332.083 kb on - strand at 332.083 kb on - strand at 332.117 kb on + strand, within EX28DRAFT_3665 at 332.117 kb on + strand, within EX28DRAFT_3665 at 332.118 kb on - strand, within EX28DRAFT_3665 at 332.145 kb on + strand, within EX28DRAFT_3665 at 332.146 kb on - strand, within EX28DRAFT_3665 at 332.326 kb on - strand, within EX28DRAFT_3665 at 332.350 kb on + strand, within EX28DRAFT_3665 at 332.370 kb on - strand, within EX28DRAFT_3665 at 332.370 kb on - strand, within EX28DRAFT_3665 at 332.372 kb on + strand, within EX28DRAFT_3665 at 332.373 kb on - strand, within EX28DRAFT_3665 at 332.377 kb on - strand, within EX28DRAFT_3665 at 332.446 kb on - strand, within EX28DRAFT_3665 at 332.540 kb on - strand, within EX28DRAFT_3665 at 332.707 kb on + strand at 332.708 kb on - strand at 332.708 kb on - strand at 332.783 kb on - strand at 332.825 kb on + strand, within EX28DRAFT_3666 at 332.826 kb on - strand, within EX28DRAFT_3666 at 333.027 kb on - strand, within EX28DRAFT_3666 at 333.167 kb on - strand, within EX28DRAFT_3666 at 333.189 kb on + strand, within EX28DRAFT_3666 at 333.190 kb on - strand, within EX28DRAFT_3666 at 333.190 kb on - strand, within EX28DRAFT_3666 at 333.284 kb on - strand, within EX28DRAFT_3666 at 333.284 kb on - strand, within EX28DRAFT_3666 at 333.338 kb on - strand, within EX28DRAFT_3666 at 333.413 kb on - strand, within EX28DRAFT_3666 at 333.444 kb on - strand, within EX28DRAFT_3666 at 333.498 kb on - strand, within EX28DRAFT_3666 at 333.536 kb on + strand at 333.558 kb on + strand at 333.558 kb on + strand at 333.558 kb on + strand at 333.559 kb on - strand at 333.563 kb on - strand at 333.566 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 331,114 + EX28DRAFT_3664 0.26 -1.2 331,310 - EX28DRAFT_3664 0.43 +0.5 331,310 - EX28DRAFT_3664 0.43 -0.8 331,318 - EX28DRAFT_3664 0.43 +0.2 331,470 + EX28DRAFT_3664 0.56 +0.0 331,507 + EX28DRAFT_3664 0.59 -3.8 331,507 + EX28DRAFT_3664 0.59 +0.6 331,507 + EX28DRAFT_3664 0.59 +1.1 331,507 + EX28DRAFT_3664 0.59 -0.4 331,507 + EX28DRAFT_3664 0.59 -0.3 331,507 + EX28DRAFT_3664 0.59 +0.3 331,507 + EX28DRAFT_3664 0.59 +1.4 331,507 + EX28DRAFT_3664 0.59 -2.7 331,508 - EX28DRAFT_3664 0.59 -0.3 331,508 - EX28DRAFT_3664 0.59 -0.2 331,508 - EX28DRAFT_3664 0.59 -0.5 331,508 - EX28DRAFT_3664 0.59 +0.1 331,508 - EX28DRAFT_3664 0.59 +0.1 331,508 - EX28DRAFT_3664 0.59 -2.8 331,508 - EX28DRAFT_3664 0.59 -0.0 331,508 - EX28DRAFT_3664 0.59 -0.9 331,518 + EX28DRAFT_3664 0.60 +0.0 331,624 + EX28DRAFT_3664 0.69 -0.3 332,046 - -0.9 332,052 - +0.9 332,052 - +0.3 332,052 - +0.1 332,056 - -0.8 332,079 - -0.2 332,079 - -0.0 332,082 + +0.2 332,082 + +0.3 332,083 - -0.1 332,083 - +0.6 332,117 + EX28DRAFT_3665 0.14 +1.1 332,117 + EX28DRAFT_3665 0.14 +0.5 332,118 - EX28DRAFT_3665 0.14 +0.6 332,145 + EX28DRAFT_3665 0.19 -0.9 332,146 - EX28DRAFT_3665 0.19 +0.5 332,326 - EX28DRAFT_3665 0.50 +0.8 332,350 + EX28DRAFT_3665 0.54 -0.1 332,370 - EX28DRAFT_3665 0.58 -1.0 332,370 - EX28DRAFT_3665 0.58 -0.1 332,372 + EX28DRAFT_3665 0.58 -3.1 332,373 - EX28DRAFT_3665 0.58 +2.7 332,377 - EX28DRAFT_3665 0.59 +0.0 332,446 - EX28DRAFT_3665 0.71 +0.5 332,540 - EX28DRAFT_3665 0.87 -0.1 332,707 + -0.8 332,708 - +0.4 332,708 - +0.8 332,783 - -0.1 332,825 + EX28DRAFT_3666 0.11 -0.6 332,826 - EX28DRAFT_3666 0.12 +0.1 333,027 - EX28DRAFT_3666 0.34 +0.4 333,167 - EX28DRAFT_3666 0.50 +0.6 333,189 + EX28DRAFT_3666 0.52 -1.6 333,190 - EX28DRAFT_3666 0.52 -0.9 333,190 - EX28DRAFT_3666 0.52 +0.6 333,284 - EX28DRAFT_3666 0.63 +0.6 333,284 - EX28DRAFT_3666 0.63 -1.5 333,338 - EX28DRAFT_3666 0.69 +0.2 333,413 - EX28DRAFT_3666 0.77 -0.2 333,444 - EX28DRAFT_3666 0.81 -1.7 333,498 - EX28DRAFT_3666 0.87 +0.2 333,536 + +0.2 333,558 + -0.6 333,558 + -0.7 333,558 + -1.4 333,559 - +0.2 333,563 - -2.1 333,566 + +0.7
Or see this region's nucleotide sequence