Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3589 and EX28DRAFT_3590 are separated by 262 nucleotides EX28DRAFT_3590 and EX28DRAFT_3591 are separated by 109 nucleotides
EX28DRAFT_3589: EX28DRAFT_3589 - glycine radical enzyme, YjjI family, at 245,492 to 247,039
_3589
EX28DRAFT_3590: EX28DRAFT_3590 - deoxyribose-phosphate aldolase, at 247,302 to 248,081
_3590
EX28DRAFT_3591: EX28DRAFT_3591 - thymidine phosphorylase (EC 2.4.2.4), at 248,191 to 249,513
_3591
Position (kb) 247
248
249 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 246.417 kb on - strand, within EX28DRAFT_3589 at 246.468 kb on + strand, within EX28DRAFT_3589 at 246.662 kb on + strand, within EX28DRAFT_3589 at 246.665 kb on + strand, within EX28DRAFT_3589 at 246.666 kb on - strand, within EX28DRAFT_3589 at 246.687 kb on + strand, within EX28DRAFT_3589 at 246.688 kb on - strand, within EX28DRAFT_3589 at 246.828 kb on + strand, within EX28DRAFT_3589 at 246.872 kb on - strand, within EX28DRAFT_3589 at 246.975 kb on - strand at 247.039 kb on + strand at 247.039 kb on + strand at 247.040 kb on - strand at 247.080 kb on + strand at 247.131 kb on + strand at 247.249 kb on + strand at 247.275 kb on + strand at 247.301 kb on + strand at 247.313 kb on - strand at 247.373 kb on + strand at 247.374 kb on - strand at 247.443 kb on - strand, within EX28DRAFT_3590 at 247.443 kb on - strand, within EX28DRAFT_3590 at 247.519 kb on + strand, within EX28DRAFT_3590 at 247.523 kb on + strand, within EX28DRAFT_3590 at 247.523 kb on + strand, within EX28DRAFT_3590 at 247.524 kb on - strand, within EX28DRAFT_3590 at 247.677 kb on - strand, within EX28DRAFT_3590 at 247.758 kb on - strand, within EX28DRAFT_3590 at 247.999 kb on - strand, within EX28DRAFT_3590 at 248.060 kb on + strand at 248.077 kb on - strand at 248.211 kb on + strand at 248.241 kb on - strand at 248.340 kb on + strand, within EX28DRAFT_3591 at 248.340 kb on + strand, within EX28DRAFT_3591 at 248.340 kb on + strand, within EX28DRAFT_3591 at 248.341 kb on - strand, within EX28DRAFT_3591 at 248.625 kb on + strand, within EX28DRAFT_3591 at 248.692 kb on + strand, within EX28DRAFT_3591 at 248.831 kb on - strand, within EX28DRAFT_3591 at 248.970 kb on - strand, within EX28DRAFT_3591 at 249.041 kb on + strand, within EX28DRAFT_3591 at 249.041 kb on + strand, within EX28DRAFT_3591 at 249.042 kb on - strand, within EX28DRAFT_3591 at 249.042 kb on - strand, within EX28DRAFT_3591
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 246,417 - EX28DRAFT_3589 0.60 -0.3 246,468 + EX28DRAFT_3589 0.63 +0.3 246,662 + EX28DRAFT_3589 0.76 -0.4 246,665 + EX28DRAFT_3589 0.76 +0.1 246,666 - EX28DRAFT_3589 0.76 -1.0 246,687 + EX28DRAFT_3589 0.77 -0.3 246,688 - EX28DRAFT_3589 0.77 -0.1 246,828 + EX28DRAFT_3589 0.86 -0.6 246,872 - EX28DRAFT_3589 0.89 -1.1 246,975 - +0.1 247,039 + -0.1 247,039 + +0.3 247,040 - +0.8 247,080 + -0.2 247,131 + -3.4 247,249 + -0.1 247,275 + +1.0 247,301 + -3.2 247,313 - +0.7 247,373 + +0.4 247,374 - +0.4 247,443 - EX28DRAFT_3590 0.18 -1.4 247,443 - EX28DRAFT_3590 0.18 +0.4 247,519 + EX28DRAFT_3590 0.28 -0.3 247,523 + EX28DRAFT_3590 0.28 +0.5 247,523 + EX28DRAFT_3590 0.28 +0.1 247,524 - EX28DRAFT_3590 0.28 +1.7 247,677 - EX28DRAFT_3590 0.48 -0.2 247,758 - EX28DRAFT_3590 0.58 +0.8 247,999 - EX28DRAFT_3590 0.89 +0.7 248,060 + -0.1 248,077 - +0.2 248,211 + -0.0 248,241 - +1.1 248,340 + EX28DRAFT_3591 0.11 -3.0 248,340 + EX28DRAFT_3591 0.11 -0.6 248,340 + EX28DRAFT_3591 0.11 +0.1 248,341 - EX28DRAFT_3591 0.11 -0.0 248,625 + EX28DRAFT_3591 0.33 -1.4 248,692 + EX28DRAFT_3591 0.38 +0.4 248,831 - EX28DRAFT_3591 0.48 -0.4 248,970 - EX28DRAFT_3591 0.59 +0.3 249,041 + EX28DRAFT_3591 0.64 -0.2 249,041 + EX28DRAFT_3591 0.64 -1.3 249,042 - EX28DRAFT_3591 0.64 +0.1 249,042 - EX28DRAFT_3591 0.64 -0.3
Or see this region's nucleotide sequence