Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2570 and EX28DRAFT_2571 are separated by 88 nucleotides EX28DRAFT_2571 and EX28DRAFT_2572 are separated by 139 nucleotides
EX28DRAFT_2570: EX28DRAFT_2570 - Predicted membrane protein, at 2,600,942 to 2,603,557
_2570
EX28DRAFT_2571: EX28DRAFT_2571 - Glycosidases, at 2,603,646 to 2,605,472
_2571
EX28DRAFT_2572: EX28DRAFT_2572 - Gamma-aminobutyrate permease and related permeases, at 2,605,612 to 2,606,985
_2572
Position (kb)
2603
2604
2605
2606 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2602.654 kb on - strand, within EX28DRAFT_2570 at 2602.690 kb on + strand, within EX28DRAFT_2570 at 2602.691 kb on - strand, within EX28DRAFT_2570 at 2602.981 kb on - strand, within EX28DRAFT_2570 at 2603.020 kb on - strand, within EX28DRAFT_2570 at 2603.131 kb on - strand, within EX28DRAFT_2570 at 2603.226 kb on - strand, within EX28DRAFT_2570 at 2603.467 kb on + strand at 2603.467 kb on + strand at 2603.519 kb on + strand at 2603.544 kb on + strand at 2603.544 kb on + strand at 2603.545 kb on - strand at 2603.601 kb on + strand at 2603.601 kb on + strand at 2603.601 kb on + strand at 2603.601 kb on + strand at 2603.602 kb on - strand at 2603.602 kb on - strand at 2603.602 kb on - strand at 2603.621 kb on + strand at 2603.622 kb on - strand at 2603.647 kb on + strand at 2603.703 kb on + strand at 2603.723 kb on + strand at 2603.831 kb on - strand, within EX28DRAFT_2571 at 2603.866 kb on + strand, within EX28DRAFT_2571 at 2603.909 kb on + strand, within EX28DRAFT_2571 at 2603.910 kb on - strand, within EX28DRAFT_2571 at 2604.031 kb on + strand, within EX28DRAFT_2571 at 2604.032 kb on - strand, within EX28DRAFT_2571 at 2604.032 kb on - strand, within EX28DRAFT_2571 at 2604.034 kb on + strand, within EX28DRAFT_2571 at 2604.034 kb on + strand, within EX28DRAFT_2571 at 2604.034 kb on + strand, within EX28DRAFT_2571 at 2604.035 kb on - strand, within EX28DRAFT_2571 at 2604.190 kb on + strand, within EX28DRAFT_2571 at 2604.456 kb on - strand, within EX28DRAFT_2571 at 2604.456 kb on - strand, within EX28DRAFT_2571 at 2604.841 kb on + strand, within EX28DRAFT_2571 at 2604.841 kb on + strand, within EX28DRAFT_2571 at 2604.842 kb on - strand, within EX28DRAFT_2571 at 2604.911 kb on - strand, within EX28DRAFT_2571 at 2604.950 kb on - strand, within EX28DRAFT_2571 at 2605.033 kb on + strand, within EX28DRAFT_2571 at 2605.033 kb on + strand, within EX28DRAFT_2571 at 2605.033 kb on + strand, within EX28DRAFT_2571 at 2605.033 kb on + strand, within EX28DRAFT_2571 at 2605.040 kb on + strand, within EX28DRAFT_2571 at 2605.214 kb on + strand, within EX28DRAFT_2571 at 2605.214 kb on + strand, within EX28DRAFT_2571 at 2605.230 kb on - strand, within EX28DRAFT_2571 at 2605.350 kb on + strand at 2605.351 kb on - strand at 2605.407 kb on - strand at 2605.526 kb on + strand at 2605.527 kb on - strand at 2605.613 kb on + strand at 2605.614 kb on - strand at 2605.866 kb on + strand, within EX28DRAFT_2572 at 2605.937 kb on + strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2605.938 kb on - strand, within EX28DRAFT_2572 at 2606.214 kb on - strand, within EX28DRAFT_2572 at 2606.214 kb on - strand, within EX28DRAFT_2572 at 2606.223 kb on + strand, within EX28DRAFT_2572 at 2606.224 kb on - strand, within EX28DRAFT_2572 at 2606.247 kb on - strand, within EX28DRAFT_2572 at 2606.247 kb on - strand, within EX28DRAFT_2572
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,602,654 - EX28DRAFT_2570 0.65 +0.5 2,602,690 + EX28DRAFT_2570 0.67 +0.0 2,602,691 - EX28DRAFT_2570 0.67 -2.6 2,602,981 - EX28DRAFT_2570 0.78 +0.3 2,603,020 - EX28DRAFT_2570 0.79 +1.4 2,603,131 - EX28DRAFT_2570 0.84 +0.6 2,603,226 - EX28DRAFT_2570 0.87 -0.2 2,603,467 + -0.5 2,603,467 + +0.7 2,603,519 + -0.3 2,603,544 + -2.9 2,603,544 + -0.0 2,603,545 - -2.5 2,603,601 + -1.3 2,603,601 + -0.4 2,603,601 + +0.4 2,603,601 + -0.2 2,603,602 - +0.7 2,603,602 - -0.3 2,603,602 - +0.2 2,603,621 + +0.1 2,603,622 - +0.9 2,603,647 + -0.2 2,603,703 + -0.3 2,603,723 + -0.5 2,603,831 - EX28DRAFT_2571 0.10 -0.4 2,603,866 + EX28DRAFT_2571 0.12 +1.1 2,603,909 + EX28DRAFT_2571 0.14 -1.5 2,603,910 - EX28DRAFT_2571 0.14 +0.1 2,604,031 + EX28DRAFT_2571 0.21 +1.6 2,604,032 - EX28DRAFT_2571 0.21 +0.3 2,604,032 - EX28DRAFT_2571 0.21 +0.4 2,604,034 + EX28DRAFT_2571 0.21 -0.2 2,604,034 + EX28DRAFT_2571 0.21 -0.5 2,604,034 + EX28DRAFT_2571 0.21 +1.6 2,604,035 - EX28DRAFT_2571 0.21 +0.2 2,604,190 + EX28DRAFT_2571 0.30 -0.1 2,604,456 - EX28DRAFT_2571 0.44 -1.0 2,604,456 - EX28DRAFT_2571 0.44 -0.0 2,604,841 + EX28DRAFT_2571 0.65 -2.1 2,604,841 + EX28DRAFT_2571 0.65 +1.0 2,604,842 - EX28DRAFT_2571 0.65 +0.4 2,604,911 - EX28DRAFT_2571 0.69 +1.8 2,604,950 - EX28DRAFT_2571 0.71 +0.1 2,605,033 + EX28DRAFT_2571 0.76 +0.3 2,605,033 + EX28DRAFT_2571 0.76 +0.6 2,605,033 + EX28DRAFT_2571 0.76 +0.4 2,605,033 + EX28DRAFT_2571 0.76 +0.1 2,605,040 + EX28DRAFT_2571 0.76 -2.2 2,605,214 + EX28DRAFT_2571 0.86 +0.0 2,605,214 + EX28DRAFT_2571 0.86 +0.9 2,605,230 - EX28DRAFT_2571 0.87 +0.3 2,605,350 + +0.6 2,605,351 - -0.6 2,605,407 - -1.2 2,605,526 + -0.4 2,605,527 - -0.4 2,605,613 + +0.4 2,605,614 - +0.4 2,605,866 + EX28DRAFT_2572 0.18 -0.0 2,605,937 + EX28DRAFT_2572 0.24 +0.2 2,605,938 - EX28DRAFT_2572 0.24 +1.0 2,605,938 - EX28DRAFT_2572 0.24 +0.0 2,605,938 - EX28DRAFT_2572 0.24 -0.2 2,605,938 - EX28DRAFT_2572 0.24 -0.5 2,605,938 - EX28DRAFT_2572 0.24 +0.0 2,605,938 - EX28DRAFT_2572 0.24 +0.2 2,605,938 - EX28DRAFT_2572 0.24 -0.2 2,606,214 - EX28DRAFT_2572 0.44 +0.1 2,606,214 - EX28DRAFT_2572 0.44 +0.5 2,606,223 + EX28DRAFT_2572 0.44 -0.4 2,606,224 - EX28DRAFT_2572 0.45 +1.1 2,606,247 - EX28DRAFT_2572 0.46 +0.1 2,606,247 - EX28DRAFT_2572 0.46 -1.3
Or see this region's nucleotide sequence