Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21325 and IAI46_21330 are separated by 165 nucleotides IAI46_21330 and IAI46_21335 are separated by 633 nucleotides
IAI46_21325: IAI46_21325 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 4,519,581 to 4,522,244
_21325
IAI46_21330: IAI46_21330 - pyruvate dehydrogenase complex transcriptional repressor PdhR, at 4,522,410 to 4,523,174
_21330
IAI46_21335: IAI46_21335 - amino acid permease, at 4,523,808 to 4,525,187
_21335
Position (kb)
4522
4523
4524 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4521.800 kb on - strand, within IAI46_21325 at 4521.892 kb on + strand, within IAI46_21325 at 4521.893 kb on - strand, within IAI46_21325 at 4522.251 kb on - strand at 4522.335 kb on - strand at 4522.335 kb on - strand at 4522.346 kb on - strand at 4522.346 kb on - strand at 4522.353 kb on + strand at 4522.354 kb on - strand at 4522.358 kb on - strand at 4522.358 kb on - strand at 4522.412 kb on - strand at 4522.412 kb on - strand at 4522.666 kb on - strand, within IAI46_21330 at 4522.717 kb on + strand, within IAI46_21330 at 4522.718 kb on - strand, within IAI46_21330 at 4522.838 kb on - strand, within IAI46_21330 at 4522.838 kb on - strand, within IAI46_21330 at 4523.215 kb on - strand at 4523.271 kb on - strand at 4523.308 kb on - strand at 4523.354 kb on + strand at 4523.354 kb on + strand at 4523.355 kb on - strand at 4523.355 kb on - strand at 4523.355 kb on - strand at 4523.355 kb on - strand at 4523.355 kb on - strand at 4523.357 kb on + strand at 4523.364 kb on + strand at 4523.365 kb on - strand at 4523.365 kb on - strand at 4523.451 kb on + strand at 4523.451 kb on + strand at 4523.452 kb on - strand at 4523.465 kb on + strand at 4523.465 kb on + strand at 4523.465 kb on + strand at 4523.465 kb on + strand at 4523.466 kb on - strand at 4523.469 kb on + strand at 4523.469 kb on + strand at 4523.470 kb on - strand at 4523.470 kb on - strand at 4523.470 kb on - strand at 4523.470 kb on - strand at 4523.482 kb on + strand at 4523.482 kb on + strand at 4523.537 kb on + strand at 4523.550 kb on + strand at 4523.551 kb on - strand at 4523.551 kb on - strand at 4523.566 kb on + strand at 4523.647 kb on + strand at 4523.648 kb on - strand at 4523.649 kb on + strand at 4523.650 kb on - strand at 4523.650 kb on - strand at 4523.674 kb on + strand at 4523.674 kb on + strand at 4523.675 kb on - strand at 4523.680 kb on + strand at 4523.714 kb on + strand at 4523.717 kb on + strand at 4523.718 kb on - strand at 4523.718 kb on - strand at 4523.721 kb on + strand at 4523.721 kb on + strand at 4523.721 kb on + strand at 4523.721 kb on + strand at 4523.722 kb on - strand at 4523.722 kb on - strand at 4523.723 kb on + strand at 4523.732 kb on - strand at 4523.754 kb on + strand at 4523.766 kb on + strand at 4523.870 kb on + strand at 4523.870 kb on + strand at 4523.870 kb on + strand at 4523.870 kb on + strand at 4523.870 kb on + strand at 4523.871 kb on - strand at 4523.871 kb on - strand at 4523.878 kb on + strand at 4523.903 kb on - strand at 4523.903 kb on - strand at 4524.013 kb on + strand, within IAI46_21335 at 4524.056 kb on + strand, within IAI46_21335 at 4524.056 kb on + strand, within IAI46_21335 at 4524.060 kb on + strand, within IAI46_21335 at 4524.060 kb on + strand, within IAI46_21335 at 4524.060 kb on + strand, within IAI46_21335 at 4524.061 kb on - strand, within IAI46_21335 at 4524.099 kb on + strand, within IAI46_21335 at 4524.099 kb on + strand, within IAI46_21335 at 4524.111 kb on + strand, within IAI46_21335 at 4524.111 kb on + strand, within IAI46_21335 at 4524.111 kb on + strand, within IAI46_21335 at 4524.111 kb on + strand, within IAI46_21335 at 4524.112 kb on - strand, within IAI46_21335 at 4524.112 kb on - strand, within IAI46_21335 at 4524.112 kb on - strand, within IAI46_21335 at 4524.112 kb on - strand, within IAI46_21335 at 4524.112 kb on - strand, within IAI46_21335 at 4524.112 kb on - strand, within IAI46_21335 at 4524.115 kb on + strand, within IAI46_21335 at 4524.115 kb on + strand, within IAI46_21335 at 4524.115 kb on + strand, within IAI46_21335 at 4524.115 kb on + strand, within IAI46_21335 at 4524.115 kb on + strand, within IAI46_21335 at 4524.116 kb on - strand, within IAI46_21335 at 4524.116 kb on - strand, within IAI46_21335 at 4524.116 kb on - strand, within IAI46_21335 at 4524.116 kb on - strand, within IAI46_21335 at 4524.149 kb on + strand, within IAI46_21335 at 4524.153 kb on + strand, within IAI46_21335 at 4524.153 kb on + strand, within IAI46_21335 at 4524.153 kb on + strand, within IAI46_21335 at 4524.153 kb on + strand, within IAI46_21335 at 4524.153 kb on + strand, within IAI46_21335 at 4524.153 kb on + strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335 at 4524.154 kb on - strand, within IAI46_21335
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 4,521,800 - IAI46_21325 0.83 +0.1 4,521,892 + IAI46_21325 0.87 +0.3 4,521,893 - IAI46_21325 0.87 -1.1 4,522,251 - +0.1 4,522,335 - +0.6 4,522,335 - +0.4 4,522,346 - +0.5 4,522,346 - -0.4 4,522,353 + +1.3 4,522,354 - +1.2 4,522,358 - +0.8 4,522,358 - +0.3 4,522,412 - +0.4 4,522,412 - +0.2 4,522,666 - IAI46_21330 0.33 -0.0 4,522,717 + IAI46_21330 0.40 +0.1 4,522,718 - IAI46_21330 0.40 -0.7 4,522,838 - IAI46_21330 0.56 -0.2 4,522,838 - IAI46_21330 0.56 -0.1 4,523,215 - -0.4 4,523,271 - +0.5 4,523,308 - +2.4 4,523,354 + +0.5 4,523,354 + -0.2 4,523,355 - -0.3 4,523,355 - -0.0 4,523,355 - +0.6 4,523,355 - -0.1 4,523,355 - +0.2 4,523,357 + +0.5 4,523,364 + -0.4 4,523,365 - +0.8 4,523,365 - +0.4 4,523,451 + +0.0 4,523,451 + -0.2 4,523,452 - -2.2 4,523,465 + +0.6 4,523,465 + -0.2 4,523,465 + +0.8 4,523,465 + +0.4 4,523,466 - -0.7 4,523,469 + +0.8 4,523,469 + +0.1 4,523,470 - -0.1 4,523,470 - -1.6 4,523,470 - +1.5 4,523,470 - -0.2 4,523,482 + +1.1 4,523,482 + -0.2 4,523,537 + +0.3 4,523,550 + -1.9 4,523,551 - +1.1 4,523,551 - +0.1 4,523,566 + +1.4 4,523,647 + -0.2 4,523,648 - +1.5 4,523,649 + +0.2 4,523,650 - +0.3 4,523,650 - -0.5 4,523,674 + +0.5 4,523,674 + +2.1 4,523,675 - -0.2 4,523,680 + -1.4 4,523,714 + +0.1 4,523,717 + +0.6 4,523,718 - +0.1 4,523,718 - +0.2 4,523,721 + +0.5 4,523,721 + -0.3 4,523,721 + +0.2 4,523,721 + +0.1 4,523,722 - -0.2 4,523,722 - -0.2 4,523,723 + -0.5 4,523,732 - -0.0 4,523,754 + +0.6 4,523,766 + -0.7 4,523,870 + +0.3 4,523,870 + +0.5 4,523,870 + -0.5 4,523,870 + +0.4 4,523,870 + +0.6 4,523,871 - +1.4 4,523,871 - +0.0 4,523,878 + +0.7 4,523,903 - -0.1 4,523,903 - +1.5 4,524,013 + IAI46_21335 0.15 +0.5 4,524,056 + IAI46_21335 0.18 +0.1 4,524,056 + IAI46_21335 0.18 +0.3 4,524,060 + IAI46_21335 0.18 +0.2 4,524,060 + IAI46_21335 0.18 +0.9 4,524,060 + IAI46_21335 0.18 -0.7 4,524,061 - IAI46_21335 0.18 +1.0 4,524,099 + IAI46_21335 0.21 +0.3 4,524,099 + IAI46_21335 0.21 +0.2 4,524,111 + IAI46_21335 0.22 +0.4 4,524,111 + IAI46_21335 0.22 +0.2 4,524,111 + IAI46_21335 0.22 -0.0 4,524,111 + IAI46_21335 0.22 -0.1 4,524,112 - IAI46_21335 0.22 +0.3 4,524,112 - IAI46_21335 0.22 -0.2 4,524,112 - IAI46_21335 0.22 +0.2 4,524,112 - IAI46_21335 0.22 +1.1 4,524,112 - IAI46_21335 0.22 -0.2 4,524,112 - IAI46_21335 0.22 +0.9 4,524,115 + IAI46_21335 0.22 +1.8 4,524,115 + IAI46_21335 0.22 -1.2 4,524,115 + IAI46_21335 0.22 +0.4 4,524,115 + IAI46_21335 0.22 +0.4 4,524,115 + IAI46_21335 0.22 +0.3 4,524,116 - IAI46_21335 0.22 +0.7 4,524,116 - IAI46_21335 0.22 +0.6 4,524,116 - IAI46_21335 0.22 +0.4 4,524,116 - IAI46_21335 0.22 -0.2 4,524,149 + IAI46_21335 0.25 +0.6 4,524,153 + IAI46_21335 0.25 -0.9 4,524,153 + IAI46_21335 0.25 -0.2 4,524,153 + IAI46_21335 0.25 +0.3 4,524,153 + IAI46_21335 0.25 +0.3 4,524,153 + IAI46_21335 0.25 -0.3 4,524,153 + IAI46_21335 0.25 +0.7 4,524,154 - IAI46_21335 0.25 -0.0 4,524,154 - IAI46_21335 0.25 +0.1 4,524,154 - IAI46_21335 0.25 +0.2 4,524,154 - IAI46_21335 0.25 -2.4 4,524,154 - IAI46_21335 0.25 +0.1 4,524,154 - IAI46_21335 0.25 -0.1 4,524,154 - IAI46_21335 0.25 +0.3
Or see this region's nucleotide sequence