Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19365 and IAI46_19370 are separated by 119 nucleotides IAI46_19370 and IAI46_19375 are separated by 175 nucleotides
IAI46_19365: IAI46_19365 - tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ, at 4,086,031 to 4,086,765
_19365
IAI46_19370: IAI46_19370 - inositol-1-monophosphatase, at 4,086,885 to 4,087,688
_19370
IAI46_19375: IAI46_19375 - nickel/cobalt transporter, at 4,087,864 to 4,088,886
_19375
Position (kb) 4086
4087
4088 Strain fitness (log2 ratio) -1
0
1
2 at 4085.912 kb on - strand at 4085.946 kb on + strand at 4085.947 kb on - strand at 4085.977 kb on + strand at 4085.991 kb on - strand at 4085.994 kb on + strand at 4085.995 kb on - strand at 4086.000 kb on + strand at 4086.003 kb on + strand at 4086.133 kb on + strand, within IAI46_19365 at 4086.287 kb on + strand, within IAI46_19365 at 4086.288 kb on - strand, within IAI46_19365 at 4086.288 kb on - strand, within IAI46_19365 at 4086.288 kb on - strand, within IAI46_19365 at 4086.305 kb on + strand, within IAI46_19365 at 4086.305 kb on + strand, within IAI46_19365 at 4086.306 kb on - strand, within IAI46_19365 at 4086.306 kb on - strand, within IAI46_19365 at 4086.377 kb on + strand, within IAI46_19365 at 4086.378 kb on - strand, within IAI46_19365 at 4086.583 kb on - strand, within IAI46_19365 at 4086.666 kb on - strand, within IAI46_19365 at 4086.666 kb on - strand, within IAI46_19365 at 4086.756 kb on + strand at 4086.757 kb on - strand at 4086.757 kb on - strand at 4086.765 kb on + strand at 4086.765 kb on + strand at 4086.765 kb on + strand at 4086.765 kb on + strand at 4086.802 kb on - strand at 4086.802 kb on - strand at 4086.812 kb on + strand at 4087.649 kb on + strand at 4087.649 kb on + strand at 4087.699 kb on + strand at 4087.700 kb on - strand at 4087.700 kb on - strand at 4087.713 kb on + strand at 4087.713 kb on + strand at 4087.744 kb on - strand at 4087.752 kb on + strand at 4087.752 kb on + strand at 4087.753 kb on - strand at 4087.916 kb on + strand at 4087.916 kb on + strand at 4087.916 kb on + strand at 4087.917 kb on - strand at 4087.917 kb on - strand at 4087.918 kb on + strand at 4087.918 kb on + strand at 4088.040 kb on - strand, within IAI46_19375 at 4088.057 kb on - strand, within IAI46_19375 at 4088.192 kb on - strand, within IAI46_19375 at 4088.209 kb on - strand, within IAI46_19375 at 4088.360 kb on + strand, within IAI46_19375 at 4088.360 kb on + strand, within IAI46_19375 at 4088.578 kb on - strand, within IAI46_19375 at 4088.578 kb on - strand, within IAI46_19375 at 4088.639 kb on + strand, within IAI46_19375
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 4,085,912 - -0.2 4,085,946 + +0.3 4,085,947 - +0.3 4,085,977 + -1.2 4,085,991 - -0.1 4,085,994 + +0.2 4,085,995 - +0.9 4,086,000 + +0.4 4,086,003 + +0.2 4,086,133 + IAI46_19365 0.14 +0.5 4,086,287 + IAI46_19365 0.35 -1.3 4,086,288 - IAI46_19365 0.35 -0.0 4,086,288 - IAI46_19365 0.35 +0.3 4,086,288 - IAI46_19365 0.35 +0.5 4,086,305 + IAI46_19365 0.37 +1.1 4,086,305 + IAI46_19365 0.37 -0.5 4,086,306 - IAI46_19365 0.37 +0.4 4,086,306 - IAI46_19365 0.37 +0.6 4,086,377 + IAI46_19365 0.47 -1.7 4,086,378 - IAI46_19365 0.47 +0.2 4,086,583 - IAI46_19365 0.75 -0.6 4,086,666 - IAI46_19365 0.86 +0.3 4,086,666 - IAI46_19365 0.86 +0.4 4,086,756 + +0.7 4,086,757 - -0.8 4,086,757 - +0.6 4,086,765 + -0.3 4,086,765 + -1.4 4,086,765 + +0.1 4,086,765 + +0.6 4,086,802 - +0.2 4,086,802 - +0.1 4,086,812 + +0.4 4,087,649 + +1.2 4,087,649 + -0.4 4,087,699 + -0.4 4,087,700 - -0.8 4,087,700 - -0.4 4,087,713 + -0.4 4,087,713 + +0.2 4,087,744 - +0.4 4,087,752 + -1.2 4,087,752 + -0.4 4,087,753 - +0.1 4,087,916 + -0.3 4,087,916 + -0.0 4,087,916 + +0.3 4,087,917 - +0.7 4,087,917 - -0.5 4,087,918 + -1.4 4,087,918 + +0.1 4,088,040 - IAI46_19375 0.17 -1.2 4,088,057 - IAI46_19375 0.19 -0.0 4,088,192 - IAI46_19375 0.32 +2.3 4,088,209 - IAI46_19375 0.34 -0.5 4,088,360 + IAI46_19375 0.48 -1.1 4,088,360 + IAI46_19375 0.48 -1.3 4,088,578 - IAI46_19375 0.70 -1.0 4,088,578 - IAI46_19375 0.70 +1.1 4,088,639 + IAI46_19375 0.76 +0.1
Or see this region's nucleotide sequence