Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17330 and IAI46_17335 are separated by 9 nucleotides IAI46_17335 and IAI46_17340 are separated by 603 nucleotides IAI46_17340 and IAI46_17345 are separated by 21 nucleotides
IAI46_17330: IAI46_17330 - microcin C ABC transporter ATP-binding protein YejF, at 3,641,095 to 3,642,687
_17330
IAI46_17335: IAI46_17335 - hypothetical protein, at 3,642,697 to 3,643,041
_17335
IAI46_17340: IAI46_17340 - Bcr/CflA family multidrug efflux MFS transporter, at 3,643,645 to 3,644,871
_17340
IAI46_17345: IAI46_17345 - 16S rRNA pseudouridine(516) synthase RsuA, at 3,644,893 to 3,645,606
_17345
Position (kb)
3643
3644
3645 Strain fitness (log2 ratio)
-2
-1
0
1 at 3642.655 kb on + strand at 3642.657 kb on + strand at 3642.657 kb on + strand at 3642.657 kb on + strand at 3642.859 kb on - strand, within IAI46_17335 at 3642.872 kb on - strand, within IAI46_17335 at 3642.928 kb on - strand, within IAI46_17335 at 3642.995 kb on + strand, within IAI46_17335 at 3643.089 kb on - strand at 3643.089 kb on - strand at 3643.092 kb on + strand at 3643.093 kb on - strand at 3643.098 kb on - strand at 3643.098 kb on - strand at 3643.098 kb on - strand at 3643.098 kb on - strand at 3643.099 kb on + strand at 3643.100 kb on - strand at 3643.182 kb on + strand at 3643.262 kb on + strand at 3643.262 kb on + strand at 3643.262 kb on + strand at 3643.262 kb on + strand at 3643.263 kb on - strand at 3643.263 kb on - strand at 3643.263 kb on - strand at 3643.266 kb on + strand at 3643.267 kb on - strand at 3643.396 kb on - strand at 3643.448 kb on + strand at 3643.449 kb on - strand at 3643.532 kb on + strand at 3643.542 kb on + strand at 3643.542 kb on + strand at 3643.543 kb on - strand at 3643.548 kb on + strand at 3643.616 kb on + strand at 3643.617 kb on - strand at 3643.646 kb on + strand at 3643.646 kb on + strand at 3643.689 kb on - strand at 3643.694 kb on + strand at 3643.694 kb on + strand at 3643.694 kb on + strand at 3643.695 kb on - strand at 3643.702 kb on + strand at 3643.714 kb on - strand at 3643.807 kb on + strand, within IAI46_17340 at 3643.843 kb on - strand, within IAI46_17340 at 3643.897 kb on - strand, within IAI46_17340 at 3644.094 kb on - strand, within IAI46_17340 at 3644.124 kb on + strand, within IAI46_17340 at 3644.124 kb on + strand, within IAI46_17340 at 3644.124 kb on + strand, within IAI46_17340 at 3644.135 kb on + strand, within IAI46_17340 at 3644.136 kb on - strand, within IAI46_17340 at 3644.201 kb on + strand, within IAI46_17340 at 3644.202 kb on - strand, within IAI46_17340 at 3644.202 kb on - strand, within IAI46_17340 at 3644.478 kb on + strand, within IAI46_17340 at 3644.479 kb on - strand, within IAI46_17340 at 3644.479 kb on - strand, within IAI46_17340 at 3644.479 kb on - strand, within IAI46_17340 at 3644.661 kb on - strand, within IAI46_17340 at 3644.692 kb on - strand, within IAI46_17340 at 3644.757 kb on + strand at 3644.758 kb on - strand at 3644.768 kb on + strand at 3644.768 kb on + strand at 3644.768 kb on + strand at 3644.768 kb on + strand at 3644.768 kb on + strand at 3644.768 kb on + strand at 3644.768 kb on + strand at 3644.769 kb on - strand at 3644.878 kb on + strand at 3644.879 kb on - strand at 3644.879 kb on - strand at 3644.881 kb on + strand at 3644.881 kb on + strand at 3644.882 kb on - strand at 3644.894 kb on + strand at 3644.894 kb on + strand at 3644.995 kb on - strand, within IAI46_17345 at 3645.015 kb on + strand, within IAI46_17345 at 3645.100 kb on + strand, within IAI46_17345 at 3645.101 kb on - strand, within IAI46_17345 at 3645.101 kb on - strand, within IAI46_17345 at 3645.213 kb on - strand, within IAI46_17345 at 3645.213 kb on - strand, within IAI46_17345 at 3645.328 kb on - strand, within IAI46_17345 at 3645.330 kb on - strand, within IAI46_17345 at 3645.385 kb on - strand, within IAI46_17345 at 3645.409 kb on - strand, within IAI46_17345 at 3645.418 kb on - strand, within IAI46_17345 at 3645.553 kb on + strand at 3645.587 kb on - strand at 3645.721 kb on - strand at 3645.734 kb on + strand at 3645.734 kb on + strand at 3645.735 kb on - strand at 3645.737 kb on - strand at 3645.765 kb on + strand at 3645.766 kb on - strand at 3645.806 kb on - strand at 3645.806 kb on - strand at 3645.809 kb on - strand at 3645.837 kb on + strand at 3645.870 kb on - strand at 3645.870 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,642,655 + -1.2 3,642,657 + +0.3 3,642,657 + -0.3 3,642,657 + -0.0 3,642,859 - IAI46_17335 0.47 -0.5 3,642,872 - IAI46_17335 0.51 +0.1 3,642,928 - IAI46_17335 0.67 -0.1 3,642,995 + IAI46_17335 0.86 -1.2 3,643,089 - -0.3 3,643,089 - -0.7 3,643,092 + +0.0 3,643,093 - -0.6 3,643,098 - +0.7 3,643,098 - +0.8 3,643,098 - +0.4 3,643,098 - +0.7 3,643,099 + -1.6 3,643,100 - +0.5 3,643,182 + -0.5 3,643,262 + +0.1 3,643,262 + -1.4 3,643,262 + -1.0 3,643,262 + -0.2 3,643,263 - +0.4 3,643,263 - -0.1 3,643,263 - +0.2 3,643,266 + -0.3 3,643,267 - -1.3 3,643,396 - -2.1 3,643,448 + -0.3 3,643,449 - -0.6 3,643,532 + +0.4 3,643,542 + +0.8 3,643,542 + -1.6 3,643,543 - +0.4 3,643,548 + +0.2 3,643,616 + +1.7 3,643,617 - +0.7 3,643,646 + -0.2 3,643,646 + -0.1 3,643,689 - +0.8 3,643,694 + -0.2 3,643,694 + +0.8 3,643,694 + -0.1 3,643,695 - +0.4 3,643,702 + -0.8 3,643,714 - -0.6 3,643,807 + IAI46_17340 0.13 +0.5 3,643,843 - IAI46_17340 0.16 +0.7 3,643,897 - IAI46_17340 0.21 +0.8 3,644,094 - IAI46_17340 0.37 -0.6 3,644,124 + IAI46_17340 0.39 +0.8 3,644,124 + IAI46_17340 0.39 +0.8 3,644,124 + IAI46_17340 0.39 -0.6 3,644,135 + IAI46_17340 0.40 +1.3 3,644,136 - IAI46_17340 0.40 +1.3 3,644,201 + IAI46_17340 0.45 +0.4 3,644,202 - IAI46_17340 0.45 +0.7 3,644,202 - IAI46_17340 0.45 -0.5 3,644,478 + IAI46_17340 0.68 -0.2 3,644,479 - IAI46_17340 0.68 -0.9 3,644,479 - IAI46_17340 0.68 -0.4 3,644,479 - IAI46_17340 0.68 -0.0 3,644,661 - IAI46_17340 0.83 +0.2 3,644,692 - IAI46_17340 0.85 +0.6 3,644,757 + -0.6 3,644,758 - +0.9 3,644,768 + -0.6 3,644,768 + +0.4 3,644,768 + -0.6 3,644,768 + -0.3 3,644,768 + -0.7 3,644,768 + +0.5 3,644,768 + +1.5 3,644,769 - +0.4 3,644,878 + +0.6 3,644,879 - -0.9 3,644,879 - -1.0 3,644,881 + +1.6 3,644,881 + +1.1 3,644,882 - +1.0 3,644,894 + +0.3 3,644,894 + +0.6 3,644,995 - IAI46_17345 0.14 -0.7 3,645,015 + IAI46_17345 0.17 -1.3 3,645,100 + IAI46_17345 0.29 +0.4 3,645,101 - IAI46_17345 0.29 -0.3 3,645,101 - IAI46_17345 0.29 +1.1 3,645,213 - IAI46_17345 0.45 -0.8 3,645,213 - IAI46_17345 0.45 +0.2 3,645,328 - IAI46_17345 0.61 +0.7 3,645,330 - IAI46_17345 0.61 -1.1 3,645,385 - IAI46_17345 0.69 +0.2 3,645,409 - IAI46_17345 0.72 +0.3 3,645,418 - IAI46_17345 0.74 +0.3 3,645,553 + -0.5 3,645,587 - +0.2 3,645,721 - +0.2 3,645,734 + -0.7 3,645,734 + -0.2 3,645,735 - -0.1 3,645,737 - -0.6 3,645,765 + -0.7 3,645,766 - +0.5 3,645,806 - +0.2 3,645,806 - -0.4 3,645,809 - -0.5 3,645,837 + +1.5 3,645,870 - -0.0 3,645,870 - +0.3
Or see this region's nucleotide sequence