Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16040 and IAI46_16045 are separated by 4 nucleotides IAI46_16045 and IAI46_16050 overlap by 4 nucleotides
IAI46_16040: IAI46_16040 - chemotaxis protein CheA, at 3,364,238 to 3,366,211
_16040
IAI46_16045: IAI46_16045 - flagellar motor protein MotB, at 3,366,216 to 3,367,181
_16045
IAI46_16050: IAI46_16050 - flagellar motor stator protein MotA, at 3,367,178 to 3,368,068
_16050
Position (kb)
3366
3367
3368 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3365.227 kb on + strand, within IAI46_16040 at 3365.580 kb on - strand, within IAI46_16040 at 3365.920 kb on + strand, within IAI46_16040 at 3365.950 kb on + strand, within IAI46_16040 at 3366.187 kb on - strand at 3366.196 kb on + strand at 3366.196 kb on + strand at 3366.196 kb on + strand at 3366.200 kb on - strand at 3366.569 kb on - strand, within IAI46_16045 at 3366.596 kb on + strand, within IAI46_16045 at 3366.680 kb on - strand, within IAI46_16045 at 3366.680 kb on - strand, within IAI46_16045 at 3366.680 kb on - strand, within IAI46_16045 at 3366.688 kb on - strand, within IAI46_16045 at 3367.096 kb on + strand at 3367.272 kb on + strand, within IAI46_16050 at 3367.412 kb on - strand, within IAI46_16050 at 3367.420 kb on - strand, within IAI46_16050 at 3367.683 kb on + strand, within IAI46_16050 at 3367.693 kb on + strand, within IAI46_16050 at 3367.693 kb on + strand, within IAI46_16050 at 3367.762 kb on + strand, within IAI46_16050 at 3367.907 kb on + strand, within IAI46_16050 at 3367.983 kb on + strand at 3368.040 kb on - strand at 3368.063 kb on + strand at 3368.063 kb on + strand at 3368.118 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,365,227 + IAI46_16040 0.50 +0.6 3,365,580 - IAI46_16040 0.68 +0.5 3,365,920 + IAI46_16040 0.85 +0.2 3,365,950 + IAI46_16040 0.87 +0.5 3,366,187 - +1.1 3,366,196 + +1.0 3,366,196 + -0.7 3,366,196 + +0.1 3,366,200 - -2.4 3,366,569 - IAI46_16045 0.37 +0.6 3,366,596 + IAI46_16045 0.39 +0.4 3,366,680 - IAI46_16045 0.48 +0.1 3,366,680 - IAI46_16045 0.48 +0.5 3,366,680 - IAI46_16045 0.48 -1.7 3,366,688 - IAI46_16045 0.49 +0.9 3,367,096 + +0.5 3,367,272 + IAI46_16050 0.11 +0.6 3,367,412 - IAI46_16050 0.26 +0.6 3,367,420 - IAI46_16050 0.27 -0.8 3,367,683 + IAI46_16050 0.57 +1.3 3,367,693 + IAI46_16050 0.58 -0.9 3,367,693 + IAI46_16050 0.58 +0.3 3,367,762 + IAI46_16050 0.66 +0.0 3,367,907 + IAI46_16050 0.82 -0.5 3,367,983 + +0.1 3,368,040 - +0.9 3,368,063 + +2.0 3,368,063 + -0.0 3,368,118 + -0.8
Or see this region's nucleotide sequence