Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14155 and IAI46_14160 are separated by 294 nucleotides IAI46_14160 and IAI46_14165 are separated by 23 nucleotides
IAI46_14155: IAI46_14155 - DeoR/GlpR transcriptional regulator, at 3,002,719 to 3,003,483
_14155
IAI46_14160: IAI46_14160 - glycerol kinase, at 3,003,778 to 3,005,220
_14160
IAI46_14165: IAI46_14165 - ethanolamine utilization protein EutH, at 3,005,244 to 3,006,491
_14165
Position (kb)
3003
3004
3005
3006 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3002.803 kb on - strand, within IAI46_14155 at 3002.985 kb on - strand, within IAI46_14155 at 3003.139 kb on - strand, within IAI46_14155 at 3003.388 kb on - strand, within IAI46_14155 at 3003.497 kb on - strand at 3003.497 kb on - strand at 3003.565 kb on - strand at 3004.045 kb on + strand, within IAI46_14160 at 3004.046 kb on - strand, within IAI46_14160 at 3004.046 kb on - strand, within IAI46_14160 at 3004.046 kb on - strand, within IAI46_14160 at 3004.046 kb on - strand, within IAI46_14160 at 3004.057 kb on - strand, within IAI46_14160 at 3004.157 kb on - strand, within IAI46_14160 at 3004.433 kb on - strand, within IAI46_14160 at 3004.490 kb on - strand, within IAI46_14160 at 3004.490 kb on - strand, within IAI46_14160 at 3004.611 kb on - strand, within IAI46_14160 at 3004.663 kb on + strand, within IAI46_14160 at 3004.664 kb on - strand, within IAI46_14160 at 3004.708 kb on + strand, within IAI46_14160 at 3004.918 kb on + strand, within IAI46_14160 at 3004.988 kb on - strand, within IAI46_14160 at 3004.993 kb on - strand, within IAI46_14160 at 3005.165 kb on - strand at 3005.187 kb on + strand at 3005.268 kb on - strand at 3005.271 kb on + strand at 3005.272 kb on - strand at 3005.274 kb on - strand at 3005.357 kb on + strand at 3005.397 kb on - strand, within IAI46_14165 at 3005.399 kb on + strand, within IAI46_14165 at 3005.400 kb on - strand, within IAI46_14165 at 3005.424 kb on + strand, within IAI46_14165 at 3005.425 kb on - strand, within IAI46_14165 at 3005.429 kb on + strand, within IAI46_14165 at 3005.432 kb on + strand, within IAI46_14165 at 3005.432 kb on + strand, within IAI46_14165 at 3005.432 kb on + strand, within IAI46_14165 at 3005.432 kb on + strand, within IAI46_14165 at 3005.433 kb on - strand, within IAI46_14165 at 3005.601 kb on - strand, within IAI46_14165 at 3005.656 kb on - strand, within IAI46_14165 at 3005.736 kb on - strand, within IAI46_14165 at 3005.736 kb on - strand, within IAI46_14165 at 3005.739 kb on - strand, within IAI46_14165 at 3005.754 kb on - strand, within IAI46_14165 at 3005.878 kb on + strand, within IAI46_14165 at 3005.915 kb on + strand, within IAI46_14165 at 3005.915 kb on + strand, within IAI46_14165 at 3005.916 kb on - strand, within IAI46_14165 at 3005.979 kb on - strand, within IAI46_14165
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,002,803 - IAI46_14155 0.11 -0.6 3,002,985 - IAI46_14155 0.35 -0.1 3,003,139 - IAI46_14155 0.55 -0.2 3,003,388 - IAI46_14155 0.87 -0.2 3,003,497 - -0.1 3,003,497 - +0.8 3,003,565 - +0.7 3,004,045 + IAI46_14160 0.19 +0.3 3,004,046 - IAI46_14160 0.19 +0.2 3,004,046 - IAI46_14160 0.19 -2.0 3,004,046 - IAI46_14160 0.19 +0.0 3,004,046 - IAI46_14160 0.19 +0.6 3,004,057 - IAI46_14160 0.19 -2.0 3,004,157 - IAI46_14160 0.26 +0.5 3,004,433 - IAI46_14160 0.45 -0.4 3,004,490 - IAI46_14160 0.49 +0.9 3,004,490 - IAI46_14160 0.49 +2.0 3,004,611 - IAI46_14160 0.58 +0.3 3,004,663 + IAI46_14160 0.61 -0.4 3,004,664 - IAI46_14160 0.61 +0.4 3,004,708 + IAI46_14160 0.64 -0.3 3,004,918 + IAI46_14160 0.79 +0.3 3,004,988 - IAI46_14160 0.84 -1.7 3,004,993 - IAI46_14160 0.84 +1.3 3,005,165 - -1.3 3,005,187 + +0.4 3,005,268 - -0.2 3,005,271 + -0.3 3,005,272 - +1.5 3,005,274 - +0.7 3,005,357 + +0.0 3,005,397 - IAI46_14165 0.12 -1.8 3,005,399 + IAI46_14165 0.12 -1.7 3,005,400 - IAI46_14165 0.12 -0.1 3,005,424 + IAI46_14165 0.14 +0.1 3,005,425 - IAI46_14165 0.15 +0.2 3,005,429 + IAI46_14165 0.15 -0.5 3,005,432 + IAI46_14165 0.15 +0.1 3,005,432 + IAI46_14165 0.15 -0.7 3,005,432 + IAI46_14165 0.15 -2.0 3,005,432 + IAI46_14165 0.15 -0.5 3,005,433 - IAI46_14165 0.15 +0.1 3,005,601 - IAI46_14165 0.29 -0.3 3,005,656 - IAI46_14165 0.33 +0.5 3,005,736 - IAI46_14165 0.39 -1.4 3,005,736 - IAI46_14165 0.39 -1.5 3,005,739 - IAI46_14165 0.40 +1.3 3,005,754 - IAI46_14165 0.41 +2.3 3,005,878 + IAI46_14165 0.51 +0.7 3,005,915 + IAI46_14165 0.54 -1.3 3,005,915 + IAI46_14165 0.54 -0.4 3,005,916 - IAI46_14165 0.54 -0.3 3,005,979 - IAI46_14165 0.59 -0.2
Or see this region's nucleotide sequence