Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13285 and IAI46_13290 are separated by 28 nucleotides IAI46_13290 and IAI46_13295 are separated by 126 nucleotides IAI46_13295 and IAI46_13300 are separated by 73 nucleotides
IAI46_13285: IAI46_13285 - amino acid permease, at 2,834,146 to 2,835,537
_13285
IAI46_13290: IAI46_13290 - hypothetical protein, at 2,835,566 to 2,835,982
_13290
IAI46_13295: IAI46_13295 - dihydromonapterin reductase, at 2,836,109 to 2,836,831
_13295
IAI46_13300: IAI46_13300 - two-component system response regulator RstA, at 2,836,905 to 2,837,630
_13300
Position (kb)
2835
2836 Strain fitness (log2 ratio)
-1
0
1 at 2834.610 kb on + strand, within IAI46_13285 at 2834.610 kb on + strand, within IAI46_13285 at 2834.690 kb on + strand, within IAI46_13285 at 2834.847 kb on + strand, within IAI46_13285 at 2834.848 kb on - strand, within IAI46_13285 at 2834.883 kb on - strand, within IAI46_13285 at 2834.973 kb on + strand, within IAI46_13285 at 2835.358 kb on + strand, within IAI46_13285 at 2835.358 kb on + strand, within IAI46_13285 at 2835.359 kb on - strand, within IAI46_13285 at 2835.401 kb on - strand at 2835.423 kb on + strand at 2835.427 kb on + strand at 2835.572 kb on - strand at 2835.622 kb on + strand, within IAI46_13290 at 2835.622 kb on + strand, within IAI46_13290 at 2835.623 kb on - strand, within IAI46_13290 at 2835.671 kb on - strand, within IAI46_13290 at 2835.691 kb on + strand, within IAI46_13290 at 2835.843 kb on - strand, within IAI46_13290 at 2835.870 kb on + strand, within IAI46_13290 at 2835.881 kb on + strand, within IAI46_13290 at 2835.922 kb on - strand, within IAI46_13290 at 2835.973 kb on + strand at 2835.974 kb on - strand at 2836.005 kb on - strand at 2836.007 kb on + strand at 2836.008 kb on - strand at 2836.008 kb on - strand at 2836.008 kb on - strand at 2836.056 kb on + strand at 2836.067 kb on - strand at 2836.230 kb on - strand, within IAI46_13295 at 2836.304 kb on + strand, within IAI46_13295 at 2836.304 kb on + strand, within IAI46_13295 at 2836.449 kb on - strand, within IAI46_13295 at 2836.449 kb on - strand, within IAI46_13295 at 2836.508 kb on - strand, within IAI46_13295 at 2836.526 kb on + strand, within IAI46_13295 at 2836.527 kb on - strand, within IAI46_13295 at 2836.527 kb on - strand, within IAI46_13295 at 2836.562 kb on + strand, within IAI46_13295 at 2836.591 kb on + strand, within IAI46_13295 at 2836.591 kb on + strand, within IAI46_13295 at 2836.592 kb on - strand, within IAI46_13295 at 2836.661 kb on - strand, within IAI46_13295 at 2836.910 kb on + strand at 2836.979 kb on + strand, within IAI46_13300
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,834,610 + IAI46_13285 0.33 -0.4 2,834,610 + IAI46_13285 0.33 +0.5 2,834,690 + IAI46_13285 0.39 -0.2 2,834,847 + IAI46_13285 0.50 +0.3 2,834,848 - IAI46_13285 0.50 +0.0 2,834,883 - IAI46_13285 0.53 -0.5 2,834,973 + IAI46_13285 0.59 +0.3 2,835,358 + IAI46_13285 0.87 +1.4 2,835,358 + IAI46_13285 0.87 +0.3 2,835,359 - IAI46_13285 0.87 +0.5 2,835,401 - +1.0 2,835,423 + -1.5 2,835,427 + +0.9 2,835,572 - +0.8 2,835,622 + IAI46_13290 0.13 -0.8 2,835,622 + IAI46_13290 0.13 +0.1 2,835,623 - IAI46_13290 0.14 +0.3 2,835,671 - IAI46_13290 0.25 -0.3 2,835,691 + IAI46_13290 0.30 -0.1 2,835,843 - IAI46_13290 0.66 +0.3 2,835,870 + IAI46_13290 0.73 +0.0 2,835,881 + IAI46_13290 0.76 -1.4 2,835,922 - IAI46_13290 0.85 +0.6 2,835,973 + -1.3 2,835,974 - +0.9 2,836,005 - +1.6 2,836,007 + +1.3 2,836,008 - -0.4 2,836,008 - +0.5 2,836,008 - +0.6 2,836,056 + +0.8 2,836,067 - -0.4 2,836,230 - IAI46_13295 0.17 +0.2 2,836,304 + IAI46_13295 0.27 +0.2 2,836,304 + IAI46_13295 0.27 -1.4 2,836,449 - IAI46_13295 0.47 +0.6 2,836,449 - IAI46_13295 0.47 +0.7 2,836,508 - IAI46_13295 0.55 -0.8 2,836,526 + IAI46_13295 0.58 -0.5 2,836,527 - IAI46_13295 0.58 +0.0 2,836,527 - IAI46_13295 0.58 -0.3 2,836,562 + IAI46_13295 0.63 +1.0 2,836,591 + IAI46_13295 0.67 -0.7 2,836,591 + IAI46_13295 0.67 +1.1 2,836,592 - IAI46_13295 0.67 +0.1 2,836,661 - IAI46_13295 0.76 -1.0 2,836,910 + -0.3 2,836,979 + IAI46_13300 0.10 +1.3
Or see this region's nucleotide sequence