Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11735 and IAI46_11740 are separated by 110 nucleotides IAI46_11740 and IAI46_11745 overlap by 1 nucleotides IAI46_11745 and IAI46_11750 are separated by 93 nucleotides
IAI46_11735: IAI46_11735 - TonB-dependent receptor family protein, at 2,475,648 to 2,477,978
_11735
IAI46_11740: IAI46_11740 - fec operon regulator FecR, at 2,478,089 to 2,479,045
_11740
IAI46_11745: IAI46_11745 - sigma-70 family RNA polymerase sigma factor, at 2,479,045 to 2,479,566
_11745
IAI46_11750: IAI46_11750 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,479,660 to 2,480,739
_11750
Position (kb)
2478
2479
2480 Strain fitness (log2 ratio)
-1
0
1
2 at 2477.174 kb on + strand, within IAI46_11735 at 2477.175 kb on - strand, within IAI46_11735 at 2477.241 kb on + strand, within IAI46_11735 at 2477.298 kb on + strand, within IAI46_11735 at 2477.298 kb on + strand, within IAI46_11735 at 2477.299 kb on - strand, within IAI46_11735 at 2477.309 kb on + strand, within IAI46_11735 at 2477.309 kb on + strand, within IAI46_11735 at 2477.354 kb on - strand, within IAI46_11735 at 2477.583 kb on + strand, within IAI46_11735 at 2477.583 kb on + strand, within IAI46_11735 at 2477.584 kb on - strand, within IAI46_11735 at 2477.669 kb on + strand, within IAI46_11735 at 2477.669 kb on + strand, within IAI46_11735 at 2477.670 kb on - strand, within IAI46_11735 at 2477.746 kb on + strand at 2477.993 kb on - strand at 2478.644 kb on + strand, within IAI46_11740 at 2478.680 kb on - strand, within IAI46_11740 at 2478.841 kb on - strand, within IAI46_11740 at 2478.978 kb on - strand at 2479.111 kb on + strand, within IAI46_11745 at 2479.521 kb on - strand at 2479.549 kb on - strand at 2479.774 kb on + strand, within IAI46_11750
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,477,174 + IAI46_11735 0.65 +0.6 2,477,175 - IAI46_11735 0.66 -0.0 2,477,241 + IAI46_11735 0.68 +0.8 2,477,298 + IAI46_11735 0.71 -0.8 2,477,298 + IAI46_11735 0.71 -0.3 2,477,299 - IAI46_11735 0.71 +1.7 2,477,309 + IAI46_11735 0.71 -1.1 2,477,309 + IAI46_11735 0.71 +1.8 2,477,354 - IAI46_11735 0.73 +0.9 2,477,583 + IAI46_11735 0.83 -0.5 2,477,583 + IAI46_11735 0.83 -0.1 2,477,584 - IAI46_11735 0.83 +0.9 2,477,669 + IAI46_11735 0.87 -0.2 2,477,669 + IAI46_11735 0.87 +0.4 2,477,670 - IAI46_11735 0.87 +0.5 2,477,746 + +1.2 2,477,993 - -1.6 2,478,644 + IAI46_11740 0.58 +1.2 2,478,680 - IAI46_11740 0.62 -0.8 2,478,841 - IAI46_11740 0.79 +0.7 2,478,978 - +0.3 2,479,111 + IAI46_11745 0.13 -0.2 2,479,521 - +1.4 2,479,549 - -0.0 2,479,774 + IAI46_11750 0.11 -0.5
Or see this region's nucleotide sequence