Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11150 and IAI46_11155 are separated by 42 nucleotides IAI46_11155 and IAI46_11160 overlap by 26 nucleotides IAI46_11160 and IAI46_11165 overlap by 4 nucleotides
IAI46_11150: IAI46_11150 - Fe-S cluster assembly protein SufB, at 2,357,450 to 2,358,946
_11150
IAI46_11155: IAI46_11155 - Fe-S cluster assembly ATPase SufC, at 2,358,989 to 2,359,735
_11155
IAI46_11160: IAI46_11160 - Fe-S cluster assembly protein SufD, at 2,359,710 to 2,361,002
_11160
IAI46_11165: IAI46_11165 - cysteine desulfurase SufS, at 2,360,999 to 2,362,219
_11165
Position (kb)
2359
2360
2361
2362 Strain fitness (log2 ratio)
-2
-1
0
1 at 2358.710 kb on - strand, within IAI46_11150 at 2358.720 kb on - strand, within IAI46_11150 at 2358.797 kb on + strand at 2358.797 kb on + strand at 2358.798 kb on - strand at 2358.993 kb on + strand at 2359.145 kb on + strand, within IAI46_11155 at 2359.606 kb on + strand, within IAI46_11155 at 2359.607 kb on - strand, within IAI46_11155 at 2359.616 kb on + strand, within IAI46_11155 at 2359.632 kb on - strand, within IAI46_11155 at 2359.632 kb on - strand, within IAI46_11155 at 2359.709 kb on + strand at 2359.759 kb on - strand at 2360.032 kb on - strand, within IAI46_11160 at 2360.052 kb on + strand, within IAI46_11160 at 2360.138 kb on + strand, within IAI46_11160 at 2360.157 kb on - strand, within IAI46_11160 at 2360.178 kb on + strand, within IAI46_11160 at 2360.401 kb on - strand, within IAI46_11160 at 2360.522 kb on + strand, within IAI46_11160 at 2360.522 kb on + strand, within IAI46_11160 at 2360.778 kb on + strand, within IAI46_11160 at 2360.822 kb on + strand, within IAI46_11160 at 2361.264 kb on + strand, within IAI46_11165 at 2361.264 kb on + strand, within IAI46_11165 at 2361.449 kb on - strand, within IAI46_11165 at 2361.449 kb on - strand, within IAI46_11165 at 2361.680 kb on + strand, within IAI46_11165 at 2361.680 kb on + strand, within IAI46_11165 at 2361.707 kb on + strand, within IAI46_11165 at 2361.797 kb on + strand, within IAI46_11165 at 2361.797 kb on + strand, within IAI46_11165 at 2361.875 kb on + strand, within IAI46_11165 at 2361.875 kb on + strand, within IAI46_11165 at 2361.876 kb on - strand, within IAI46_11165 at 2361.876 kb on - strand, within IAI46_11165 at 2361.932 kb on + strand, within IAI46_11165 at 2361.975 kb on - strand, within IAI46_11165
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,358,710 - IAI46_11150 0.84 -0.7 2,358,720 - IAI46_11150 0.85 +0.4 2,358,797 + +0.3 2,358,797 + +0.4 2,358,798 - -0.1 2,358,993 + +1.0 2,359,145 + IAI46_11155 0.21 +0.3 2,359,606 + IAI46_11155 0.83 -2.6 2,359,607 - IAI46_11155 0.83 +0.3 2,359,616 + IAI46_11155 0.84 +0.1 2,359,632 - IAI46_11155 0.86 -0.5 2,359,632 - IAI46_11155 0.86 +1.0 2,359,709 + -0.0 2,359,759 - +0.2 2,360,032 - IAI46_11160 0.25 +0.1 2,360,052 + IAI46_11160 0.26 +0.1 2,360,138 + IAI46_11160 0.33 +0.3 2,360,157 - IAI46_11160 0.35 -0.4 2,360,178 + IAI46_11160 0.36 -0.1 2,360,401 - IAI46_11160 0.53 +0.3 2,360,522 + IAI46_11160 0.63 +1.1 2,360,522 + IAI46_11160 0.63 -0.7 2,360,778 + IAI46_11160 0.83 +1.6 2,360,822 + IAI46_11160 0.86 +1.0 2,361,264 + IAI46_11165 0.22 +0.4 2,361,264 + IAI46_11165 0.22 -0.8 2,361,449 - IAI46_11165 0.37 +0.5 2,361,449 - IAI46_11165 0.37 +0.1 2,361,680 + IAI46_11165 0.56 +0.6 2,361,680 + IAI46_11165 0.56 +0.1 2,361,707 + IAI46_11165 0.58 +0.2 2,361,797 + IAI46_11165 0.65 -0.6 2,361,797 + IAI46_11165 0.65 -0.3 2,361,875 + IAI46_11165 0.72 -1.6 2,361,875 + IAI46_11165 0.72 +0.1 2,361,876 - IAI46_11165 0.72 -0.9 2,361,876 - IAI46_11165 0.72 -0.2 2,361,932 + IAI46_11165 0.76 +0.2 2,361,975 - IAI46_11165 0.80 +1.0
Or see this region's nucleotide sequence