Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07645 and IAI46_07650 are separated by 464 nucleotides IAI46_07650 and IAI46_07655 are separated by 79 nucleotides IAI46_07655 and IAI46_07660 are separated by 79 nucleotides
IAI46_07645: IAI46_07645 - response regulator transcription factor, at 1,613,460 to 1,614,089
_07645
IAI46_07650: IAI46_07650 - common pilus major fimbrillin subunit EcpA, at 1,614,554 to 1,615,141
_07650
IAI46_07655: IAI46_07655 - hypothetical protein, at 1,615,221 to 1,615,889
_07655
IAI46_07660: IAI46_07660 - CS1-pili formation C-terminal domain-containing protein, at 1,615,969 to 1,618,494
_07660
Position (kb)
1614
1615
1616 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1613.554 kb on + strand, within IAI46_07645 at 1613.559 kb on + strand, within IAI46_07645 at 1613.559 kb on + strand, within IAI46_07645 at 1613.627 kb on - strand, within IAI46_07645 at 1613.637 kb on + strand, within IAI46_07645 at 1613.638 kb on - strand, within IAI46_07645 at 1613.638 kb on - strand, within IAI46_07645 at 1613.719 kb on + strand, within IAI46_07645 at 1613.724 kb on - strand, within IAI46_07645 at 1613.747 kb on - strand, within IAI46_07645 at 1613.776 kb on + strand, within IAI46_07645 at 1613.776 kb on + strand, within IAI46_07645 at 1613.814 kb on + strand, within IAI46_07645 at 1613.814 kb on + strand, within IAI46_07645 at 1613.814 kb on + strand, within IAI46_07645 at 1613.814 kb on + strand, within IAI46_07645 at 1613.845 kb on + strand, within IAI46_07645 at 1613.855 kb on + strand, within IAI46_07645 at 1613.890 kb on + strand, within IAI46_07645 at 1613.890 kb on + strand, within IAI46_07645 at 1613.891 kb on - strand, within IAI46_07645 at 1613.958 kb on - strand, within IAI46_07645 at 1613.967 kb on - strand, within IAI46_07645 at 1613.970 kb on - strand, within IAI46_07645 at 1613.970 kb on - strand, within IAI46_07645 at 1613.984 kb on + strand, within IAI46_07645 at 1614.020 kb on + strand, within IAI46_07645 at 1614.033 kb on - strand at 1614.033 kb on - strand at 1614.047 kb on + strand at 1614.048 kb on - strand at 1614.136 kb on + strand at 1614.165 kb on + strand at 1614.166 kb on - strand at 1614.166 kb on - strand at 1614.240 kb on - strand at 1614.240 kb on - strand at 1614.240 kb on - strand at 1614.243 kb on + strand at 1614.258 kb on + strand at 1614.268 kb on + strand at 1614.269 kb on - strand at 1614.269 kb on - strand at 1614.269 kb on - strand at 1614.272 kb on + strand at 1614.273 kb on - strand at 1614.308 kb on - strand at 1614.308 kb on - strand at 1614.335 kb on - strand at 1614.414 kb on + strand at 1614.415 kb on - strand at 1614.497 kb on - strand at 1614.497 kb on - strand at 1614.511 kb on + strand at 1614.512 kb on - strand at 1614.532 kb on + strand at 1614.628 kb on + strand, within IAI46_07650 at 1614.722 kb on + strand, within IAI46_07650 at 1614.777 kb on + strand, within IAI46_07650 at 1614.777 kb on + strand, within IAI46_07650 at 1614.777 kb on + strand, within IAI46_07650 at 1614.817 kb on + strand, within IAI46_07650 at 1614.818 kb on - strand, within IAI46_07650 at 1614.851 kb on - strand, within IAI46_07650 at 1614.884 kb on + strand, within IAI46_07650 at 1615.030 kb on + strand, within IAI46_07650 at 1615.031 kb on - strand, within IAI46_07650 at 1615.051 kb on + strand, within IAI46_07650 at 1615.090 kb on + strand at 1615.091 kb on - strand at 1615.091 kb on - strand at 1615.091 kb on - strand at 1615.160 kb on - strand at 1615.183 kb on + strand at 1615.183 kb on + strand at 1615.183 kb on + strand at 1615.184 kb on - strand at 1615.214 kb on + strand at 1615.437 kb on - strand, within IAI46_07655 at 1615.437 kb on - strand, within IAI46_07655 at 1615.437 kb on - strand, within IAI46_07655 at 1615.509 kb on + strand, within IAI46_07655 at 1615.509 kb on + strand, within IAI46_07655 at 1615.510 kb on - strand, within IAI46_07655 at 1615.539 kb on + strand, within IAI46_07655 at 1615.540 kb on - strand, within IAI46_07655 at 1615.540 kb on - strand, within IAI46_07655 at 1615.628 kb on + strand, within IAI46_07655 at 1615.628 kb on + strand, within IAI46_07655 at 1615.629 kb on - strand, within IAI46_07655 at 1615.721 kb on + strand, within IAI46_07655 at 1615.721 kb on + strand, within IAI46_07655 at 1615.722 kb on - strand, within IAI46_07655 at 1615.739 kb on + strand, within IAI46_07655 at 1615.739 kb on + strand, within IAI46_07655 at 1615.740 kb on - strand, within IAI46_07655 at 1615.916 kb on + strand at 1615.916 kb on + strand at 1615.917 kb on - strand at 1615.917 kb on - strand at 1615.919 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 1,613,554 + IAI46_07645 0.15 +0.2 1,613,559 + IAI46_07645 0.16 +0.4 1,613,559 + IAI46_07645 0.16 -1.5 1,613,627 - IAI46_07645 0.27 +1.8 1,613,637 + IAI46_07645 0.28 +0.1 1,613,638 - IAI46_07645 0.28 -0.4 1,613,638 - IAI46_07645 0.28 +0.4 1,613,719 + IAI46_07645 0.41 -0.4 1,613,724 - IAI46_07645 0.42 +0.9 1,613,747 - IAI46_07645 0.46 +1.0 1,613,776 + IAI46_07645 0.50 -1.2 1,613,776 + IAI46_07645 0.50 +1.1 1,613,814 + IAI46_07645 0.56 +0.5 1,613,814 + IAI46_07645 0.56 -0.6 1,613,814 + IAI46_07645 0.56 +0.4 1,613,814 + IAI46_07645 0.56 +0.6 1,613,845 + IAI46_07645 0.61 +0.9 1,613,855 + IAI46_07645 0.63 +0.5 1,613,890 + IAI46_07645 0.68 -0.9 1,613,890 + IAI46_07645 0.68 +1.2 1,613,891 - IAI46_07645 0.68 -0.1 1,613,958 - IAI46_07645 0.79 +0.2 1,613,967 - IAI46_07645 0.80 -0.2 1,613,970 - IAI46_07645 0.81 +0.6 1,613,970 - IAI46_07645 0.81 +0.9 1,613,984 + IAI46_07645 0.83 +1.0 1,614,020 + IAI46_07645 0.89 -0.6 1,614,033 - +0.5 1,614,033 - -0.7 1,614,047 + -0.2 1,614,048 - +1.3 1,614,136 + +1.3 1,614,165 + -0.1 1,614,166 - +0.0 1,614,166 - -0.2 1,614,240 - -1.7 1,614,240 - -0.1 1,614,240 - +0.1 1,614,243 + +0.5 1,614,258 + +0.4 1,614,268 + -0.0 1,614,269 - +0.4 1,614,269 - +0.2 1,614,269 - +0.6 1,614,272 + -0.8 1,614,273 - +0.1 1,614,308 - -1.4 1,614,308 - +0.9 1,614,335 - +0.4 1,614,414 + -0.6 1,614,415 - -1.0 1,614,497 - +0.0 1,614,497 - -0.8 1,614,511 + +0.7 1,614,512 - +0.0 1,614,532 + +0.8 1,614,628 + IAI46_07650 0.13 +1.5 1,614,722 + IAI46_07650 0.29 -1.4 1,614,777 + IAI46_07650 0.38 -0.6 1,614,777 + IAI46_07650 0.38 +0.2 1,614,777 + IAI46_07650 0.38 -1.4 1,614,817 + IAI46_07650 0.45 +1.2 1,614,818 - IAI46_07650 0.45 -0.7 1,614,851 - IAI46_07650 0.51 -1.4 1,614,884 + IAI46_07650 0.56 +1.3 1,615,030 + IAI46_07650 0.81 +0.6 1,615,031 - IAI46_07650 0.81 -0.6 1,615,051 + IAI46_07650 0.85 +0.2 1,615,090 + +1.4 1,615,091 - -0.1 1,615,091 - +0.3 1,615,091 - +0.9 1,615,160 - -0.2 1,615,183 + +0.8 1,615,183 + -0.0 1,615,183 + +0.2 1,615,184 - -0.8 1,615,214 + +1.1 1,615,437 - IAI46_07655 0.32 -0.8 1,615,437 - IAI46_07655 0.32 -1.8 1,615,437 - IAI46_07655 0.32 -0.4 1,615,509 + IAI46_07655 0.43 +0.7 1,615,509 + IAI46_07655 0.43 +0.3 1,615,510 - IAI46_07655 0.43 +0.8 1,615,539 + IAI46_07655 0.48 +0.9 1,615,540 - IAI46_07655 0.48 -0.1 1,615,540 - IAI46_07655 0.48 +0.2 1,615,628 + IAI46_07655 0.61 -1.0 1,615,628 + IAI46_07655 0.61 -1.2 1,615,629 - IAI46_07655 0.61 +0.3 1,615,721 + IAI46_07655 0.75 +0.2 1,615,721 + IAI46_07655 0.75 +1.3 1,615,722 - IAI46_07655 0.75 +0.5 1,615,739 + IAI46_07655 0.77 -0.7 1,615,739 + IAI46_07655 0.77 +0.5 1,615,740 - IAI46_07655 0.78 -1.4 1,615,916 + +0.1 1,615,916 + +0.2 1,615,917 - -0.8 1,615,917 - -0.1 1,615,919 - -0.8
Or see this region's nucleotide sequence