Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06380 and IAI46_06385 are separated by 21 nucleotides IAI46_06385 and IAI46_06390 are separated by 38 nucleotides IAI46_06390 and IAI46_06395 overlap by 1 nucleotides
IAI46_06380: IAI46_06380 - quinolinate synthase NadA, at 1,359,666 to 1,360,727
_06380
IAI46_06385: IAI46_06385 - nicotinamide riboside transporter PnuC, at 1,360,749 to 1,361,474
_06385
IAI46_06390: IAI46_06390 - CDF family zinc transporter ZitB, at 1,361,513 to 1,362,475
_06390
IAI46_06395: IAI46_06395 - transporter substrate-binding domain-containing protein, at 1,362,475 to 1,365,690
_06395
Position (kb)
1361
1362
1363 Strain fitness (log2 ratio)
-1
0
1
2 at 1360.646 kb on - strand at 1360.711 kb on + strand at 1360.712 kb on - strand at 1360.712 kb on - strand at 1360.737 kb on - strand at 1360.742 kb on + strand at 1360.742 kb on + strand at 1360.743 kb on - strand at 1360.772 kb on + strand at 1360.773 kb on - strand at 1360.773 kb on - strand at 1360.856 kb on + strand, within IAI46_06385 at 1360.857 kb on - strand, within IAI46_06385 at 1360.857 kb on - strand, within IAI46_06385 at 1360.857 kb on - strand, within IAI46_06385 at 1360.863 kb on + strand, within IAI46_06385 at 1360.907 kb on + strand, within IAI46_06385 at 1360.950 kb on + strand, within IAI46_06385 at 1360.992 kb on - strand, within IAI46_06385 at 1360.995 kb on + strand, within IAI46_06385 at 1360.995 kb on + strand, within IAI46_06385 at 1360.995 kb on + strand, within IAI46_06385 at 1360.996 kb on - strand, within IAI46_06385 at 1361.005 kb on - strand, within IAI46_06385 at 1361.092 kb on + strand, within IAI46_06385 at 1361.093 kb on - strand, within IAI46_06385 at 1361.093 kb on - strand, within IAI46_06385 at 1361.093 kb on - strand, within IAI46_06385 at 1361.093 kb on - strand, within IAI46_06385 at 1361.124 kb on - strand, within IAI46_06385 at 1361.171 kb on - strand, within IAI46_06385 at 1361.290 kb on - strand, within IAI46_06385 at 1361.290 kb on - strand, within IAI46_06385 at 1361.290 kb on - strand, within IAI46_06385 at 1361.330 kb on + strand, within IAI46_06385 at 1361.330 kb on + strand, within IAI46_06385 at 1361.330 kb on + strand, within IAI46_06385 at 1361.330 kb on + strand, within IAI46_06385 at 1361.330 kb on + strand, within IAI46_06385 at 1361.380 kb on - strand, within IAI46_06385 at 1361.380 kb on - strand, within IAI46_06385 at 1361.514 kb on + strand at 1361.515 kb on - strand at 1361.600 kb on - strand at 1361.613 kb on + strand, within IAI46_06390 at 1361.662 kb on - strand, within IAI46_06390 at 1361.777 kb on + strand, within IAI46_06390 at 1361.778 kb on - strand, within IAI46_06390 at 1361.891 kb on + strand, within IAI46_06390 at 1361.906 kb on + strand, within IAI46_06390 at 1361.993 kb on + strand, within IAI46_06390 at 1361.994 kb on - strand, within IAI46_06390 at 1362.005 kb on + strand, within IAI46_06390 at 1362.006 kb on - strand, within IAI46_06390 at 1362.122 kb on - strand, within IAI46_06390 at 1362.170 kb on + strand, within IAI46_06390 at 1362.170 kb on + strand, within IAI46_06390 at 1362.177 kb on - strand, within IAI46_06390 at 1362.177 kb on - strand, within IAI46_06390 at 1362.177 kb on - strand, within IAI46_06390 at 1362.266 kb on - strand, within IAI46_06390 at 1362.325 kb on + strand, within IAI46_06390 at 1362.326 kb on - strand, within IAI46_06390 at 1362.396 kb on - strand at 1362.408 kb on - strand at 1362.423 kb on - strand at 1362.430 kb on + strand at 1362.434 kb on - strand at 1362.434 kb on - strand at 1362.434 kb on - strand at 1362.437 kb on - strand at 1362.455 kb on + strand at 1362.455 kb on + strand at 1362.455 kb on + strand at 1362.456 kb on - strand at 1362.456 kb on - strand at 1362.456 kb on - strand at 1362.456 kb on - strand at 1362.456 kb on - strand at 1362.476 kb on + strand at 1362.476 kb on + strand at 1362.486 kb on + strand at 1362.487 kb on - strand at 1362.495 kb on + strand at 1362.501 kb on + strand at 1362.501 kb on + strand at 1362.502 kb on - strand at 1362.502 kb on - strand at 1362.502 kb on - strand at 1362.503 kb on + strand at 1362.503 kb on + strand at 1362.503 kb on + strand at 1362.504 kb on - strand at 1362.504 kb on - strand at 1362.504 kb on - strand at 1362.538 kb on + strand at 1362.539 kb on - strand at 1362.561 kb on + strand at 1362.566 kb on - strand at 1362.566 kb on - strand at 1362.566 kb on - strand at 1362.566 kb on - strand at 1362.573 kb on + strand at 1362.574 kb on - strand at 1362.575 kb on + strand at 1362.576 kb on - strand at 1362.701 kb on - strand at 1362.811 kb on - strand, within IAI46_06395 at 1362.929 kb on - strand, within IAI46_06395 at 1362.951 kb on + strand, within IAI46_06395 at 1363.068 kb on + strand, within IAI46_06395 at 1363.069 kb on - strand, within IAI46_06395 at 1363.073 kb on + strand, within IAI46_06395 at 1363.073 kb on + strand, within IAI46_06395 at 1363.073 kb on + strand, within IAI46_06395 at 1363.074 kb on - strand, within IAI46_06395 at 1363.443 kb on - strand, within IAI46_06395
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 1,360,646 - -0.2 1,360,711 + +0.5 1,360,712 - -0.4 1,360,712 - +1.5 1,360,737 - -0.6 1,360,742 + +1.0 1,360,742 + +0.9 1,360,743 - +0.4 1,360,772 + -0.1 1,360,773 - -0.1 1,360,773 - +0.0 1,360,856 + IAI46_06385 0.15 +0.6 1,360,857 - IAI46_06385 0.15 +0.3 1,360,857 - IAI46_06385 0.15 +0.8 1,360,857 - IAI46_06385 0.15 +0.5 1,360,863 + IAI46_06385 0.16 +0.2 1,360,907 + IAI46_06385 0.22 +0.6 1,360,950 + IAI46_06385 0.28 +0.2 1,360,992 - IAI46_06385 0.33 +0.5 1,360,995 + IAI46_06385 0.34 +0.2 1,360,995 + IAI46_06385 0.34 -0.4 1,360,995 + IAI46_06385 0.34 -0.5 1,360,996 - IAI46_06385 0.34 -0.2 1,361,005 - IAI46_06385 0.35 -1.6 1,361,092 + IAI46_06385 0.47 +0.0 1,361,093 - IAI46_06385 0.47 +0.1 1,361,093 - IAI46_06385 0.47 -0.7 1,361,093 - IAI46_06385 0.47 +0.2 1,361,093 - IAI46_06385 0.47 -1.3 1,361,124 - IAI46_06385 0.52 +0.8 1,361,171 - IAI46_06385 0.58 +0.3 1,361,290 - IAI46_06385 0.75 +0.5 1,361,290 - IAI46_06385 0.75 -0.6 1,361,290 - IAI46_06385 0.75 +0.2 1,361,330 + IAI46_06385 0.80 -0.3 1,361,330 + IAI46_06385 0.80 +0.5 1,361,330 + IAI46_06385 0.80 -0.1 1,361,330 + IAI46_06385 0.80 +0.1 1,361,330 + IAI46_06385 0.80 -0.6 1,361,380 - IAI46_06385 0.87 +0.1 1,361,380 - IAI46_06385 0.87 -1.3 1,361,514 + +0.3 1,361,515 - +0.0 1,361,600 - +1.5 1,361,613 + IAI46_06390 0.10 -0.6 1,361,662 - IAI46_06390 0.15 +0.7 1,361,777 + IAI46_06390 0.27 -0.7 1,361,778 - IAI46_06390 0.28 +0.2 1,361,891 + IAI46_06390 0.39 -0.1 1,361,906 + IAI46_06390 0.41 +0.2 1,361,993 + IAI46_06390 0.50 +0.3 1,361,994 - IAI46_06390 0.50 -0.6 1,362,005 + IAI46_06390 0.51 +0.7 1,362,006 - IAI46_06390 0.51 +0.0 1,362,122 - IAI46_06390 0.63 -0.7 1,362,170 + IAI46_06390 0.68 +0.5 1,362,170 + IAI46_06390 0.68 -1.0 1,362,177 - IAI46_06390 0.69 +0.2 1,362,177 - IAI46_06390 0.69 +0.7 1,362,177 - IAI46_06390 0.69 +0.5 1,362,266 - IAI46_06390 0.78 +1.9 1,362,325 + IAI46_06390 0.84 -1.7 1,362,326 - IAI46_06390 0.84 -0.1 1,362,396 - +0.5 1,362,408 - +1.7 1,362,423 - +0.0 1,362,430 + +0.5 1,362,434 - -0.3 1,362,434 - -0.1 1,362,434 - -0.4 1,362,437 - +1.3 1,362,455 + -0.6 1,362,455 + -0.4 1,362,455 + -0.0 1,362,456 - -0.8 1,362,456 - -0.9 1,362,456 - -0.1 1,362,456 - -1.1 1,362,456 - -0.4 1,362,476 + -1.3 1,362,476 + +1.0 1,362,486 + +0.3 1,362,487 - +0.6 1,362,495 + +0.3 1,362,501 + +0.0 1,362,501 + -1.0 1,362,502 - -0.6 1,362,502 - -0.3 1,362,502 - +0.9 1,362,503 + +0.6 1,362,503 + +0.5 1,362,503 + -0.1 1,362,504 - -0.0 1,362,504 - -0.1 1,362,504 - -0.2 1,362,538 + +0.5 1,362,539 - +0.5 1,362,561 + -0.2 1,362,566 - -0.1 1,362,566 - +0.5 1,362,566 - +0.5 1,362,566 - +0.3 1,362,573 + -0.5 1,362,574 - +0.1 1,362,575 + -0.0 1,362,576 - +1.1 1,362,701 - +0.6 1,362,811 - IAI46_06395 0.10 -0.2 1,362,929 - IAI46_06395 0.14 -0.4 1,362,951 + IAI46_06395 0.15 +1.6 1,363,068 + IAI46_06395 0.18 +0.5 1,363,069 - IAI46_06395 0.18 -0.9 1,363,073 + IAI46_06395 0.19 +0.1 1,363,073 + IAI46_06395 0.19 -0.1 1,363,073 + IAI46_06395 0.19 +0.1 1,363,074 - IAI46_06395 0.19 +0.5 1,363,443 - IAI46_06395 0.30 -0.5
Or see this region's nucleotide sequence