Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03800 and IAI46_03805 are separated by 780 nucleotides IAI46_03805 and IAI46_03810 are separated by 11 nucleotides
IAI46_03800: IAI46_03800 - DNA mismatch repair protein MutS, at 826,429 to 828,984
_03800
IAI46_03805: IAI46_03805 - PTS sugar transporter subunit IIB, at 829,765 to 830,082
_03805
IAI46_03810: IAI46_03810 - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 830,094 to 831,455
_03810
Position (kb) 829
830
831 Strain fitness (log2 ratio) -1
0
1
2 at 828.789 kb on + strand at 828.789 kb on + strand at 828.828 kb on + strand at 828.863 kb on + strand at 828.863 kb on + strand at 828.864 kb on - strand at 828.875 kb on + strand at 828.894 kb on - strand at 828.894 kb on - strand at 828.894 kb on - strand at 828.935 kb on + strand at 828.936 kb on - strand at 828.979 kb on - strand at 828.979 kb on - strand at 828.985 kb on - strand at 829.044 kb on + strand at 829.044 kb on + strand at 829.044 kb on + strand at 829.044 kb on + strand at 829.044 kb on + strand at 829.099 kb on - strand at 829.166 kb on + strand at 829.175 kb on - strand at 829.186 kb on - strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.187 kb on + strand at 829.188 kb on - strand at 829.188 kb on - strand at 829.188 kb on - strand at 829.188 kb on - strand at 829.191 kb on - strand at 829.220 kb on - strand at 829.252 kb on + strand at 829.253 kb on - strand at 829.269 kb on + strand at 829.270 kb on - strand at 829.270 kb on - strand at 829.270 kb on - strand at 829.302 kb on + strand at 829.302 kb on + strand at 829.302 kb on + strand at 829.375 kb on + strand at 829.375 kb on + strand at 829.376 kb on - strand at 829.391 kb on - strand at 829.405 kb on + strand at 829.437 kb on - strand at 829.444 kb on - strand at 829.447 kb on + strand at 829.448 kb on - strand at 829.448 kb on - strand at 829.467 kb on + strand at 829.618 kb on + strand at 829.618 kb on + strand at 829.643 kb on - strand at 829.643 kb on - strand at 829.644 kb on + strand at 829.644 kb on + strand at 829.645 kb on - strand at 829.645 kb on - strand at 829.645 kb on - strand at 829.645 kb on - strand at 829.708 kb on - strand at 829.748 kb on - strand at 829.804 kb on - strand, within IAI46_03805 at 829.852 kb on + strand, within IAI46_03805 at 829.853 kb on - strand, within IAI46_03805 at 829.880 kb on - strand, within IAI46_03805 at 829.948 kb on + strand, within IAI46_03805 at 829.950 kb on + strand, within IAI46_03805 at 829.950 kb on + strand, within IAI46_03805 at 829.950 kb on + strand, within IAI46_03805 at 829.950 kb on + strand, within IAI46_03805 at 829.951 kb on - strand, within IAI46_03805 at 829.983 kb on + strand, within IAI46_03805 at 830.012 kb on + strand, within IAI46_03805 at 830.013 kb on - strand, within IAI46_03805 at 830.081 kb on - strand at 830.099 kb on + strand at 830.099 kb on + strand at 830.100 kb on - strand at 830.104 kb on + strand at 830.104 kb on + strand at 830.104 kb on + strand at 830.104 kb on + strand at 830.105 kb on - strand at 830.129 kb on - strand at 830.129 kb on - strand at 830.129 kb on - strand at 830.154 kb on - strand at 830.168 kb on + strand at 830.168 kb on + strand at 830.168 kb on + strand at 830.168 kb on + strand at 830.169 kb on - strand at 830.245 kb on + strand, within IAI46_03810 at 830.245 kb on + strand, within IAI46_03810 at 830.245 kb on + strand, within IAI46_03810 at 830.246 kb on - strand, within IAI46_03810 at 830.246 kb on - strand, within IAI46_03810 at 830.291 kb on - strand, within IAI46_03810 at 830.320 kb on + strand, within IAI46_03810 at 830.320 kb on + strand, within IAI46_03810 at 830.353 kb on - strand, within IAI46_03810 at 830.353 kb on - strand, within IAI46_03810 at 830.372 kb on + strand, within IAI46_03810 at 830.372 kb on + strand, within IAI46_03810 at 830.372 kb on + strand, within IAI46_03810 at 830.372 kb on + strand, within IAI46_03810 at 830.373 kb on - strand, within IAI46_03810 at 830.373 kb on - strand, within IAI46_03810 at 830.373 kb on - strand, within IAI46_03810 at 830.373 kb on - strand, within IAI46_03810 at 830.423 kb on + strand, within IAI46_03810 at 830.424 kb on - strand, within IAI46_03810 at 830.424 kb on - strand, within IAI46_03810 at 830.449 kb on + strand, within IAI46_03810 at 830.450 kb on - strand, within IAI46_03810 at 830.468 kb on + strand, within IAI46_03810 at 830.502 kb on + strand, within IAI46_03810 at 830.502 kb on + strand, within IAI46_03810 at 830.502 kb on + strand, within IAI46_03810 at 830.503 kb on - strand, within IAI46_03810 at 830.503 kb on - strand, within IAI46_03810 at 830.516 kb on + strand, within IAI46_03810 at 830.583 kb on - strand, within IAI46_03810 at 830.630 kb on - strand, within IAI46_03810 at 830.630 kb on - strand, within IAI46_03810 at 830.630 kb on - strand, within IAI46_03810 at 830.630 kb on - strand, within IAI46_03810 at 830.630 kb on - strand, within IAI46_03810 at 830.707 kb on - strand, within IAI46_03810 at 830.802 kb on + strand, within IAI46_03810 at 830.802 kb on + strand, within IAI46_03810 at 830.802 kb on + strand, within IAI46_03810 at 830.803 kb on - strand, within IAI46_03810 at 830.803 kb on - strand, within IAI46_03810 at 830.803 kb on - strand, within IAI46_03810 at 830.803 kb on - strand, within IAI46_03810 at 830.913 kb on + strand, within IAI46_03810 at 830.913 kb on + strand, within IAI46_03810 at 830.914 kb on - strand, within IAI46_03810 at 830.914 kb on - strand, within IAI46_03810 at 830.914 kb on - strand, within IAI46_03810 at 830.914 kb on - strand, within IAI46_03810 at 830.922 kb on + strand, within IAI46_03810 at 830.922 kb on + strand, within IAI46_03810 at 830.922 kb on + strand, within IAI46_03810 at 830.923 kb on - strand, within IAI46_03810 at 830.923 kb on - strand, within IAI46_03810 at 830.923 kb on - strand, within IAI46_03810 at 830.923 kb on - strand, within IAI46_03810 at 830.966 kb on + strand, within IAI46_03810 at 830.966 kb on + strand, within IAI46_03810 at 830.966 kb on + strand, within IAI46_03810 at 830.967 kb on - strand, within IAI46_03810 at 830.967 kb on - strand, within IAI46_03810 at 830.967 kb on - strand, within IAI46_03810 at 830.994 kb on + strand, within IAI46_03810 at 830.994 kb on + strand, within IAI46_03810 at 830.994 kb on + strand, within IAI46_03810 at 830.994 kb on + strand, within IAI46_03810 at 830.994 kb on + strand, within IAI46_03810 at 830.995 kb on - strand, within IAI46_03810 at 830.995 kb on - strand, within IAI46_03810 at 830.995 kb on - strand, within IAI46_03810 at 830.995 kb on - strand, within IAI46_03810 at 830.996 kb on + strand, within IAI46_03810 at 830.996 kb on + strand, within IAI46_03810 at 830.997 kb on - strand, within IAI46_03810 at 830.997 kb on - strand, within IAI46_03810 at 830.997 kb on - strand, within IAI46_03810 at 831.001 kb on - strand, within IAI46_03810 at 831.001 kb on - strand, within IAI46_03810 at 831.021 kb on - strand, within IAI46_03810 at 831.036 kb on - strand, within IAI46_03810
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 828,789 + +0.7 828,789 + +0.0 828,828 + +0.6 828,863 + -0.7 828,863 + -0.6 828,864 - +0.4 828,875 + -1.1 828,894 - +0.1 828,894 - -1.1 828,894 - +0.3 828,935 + -0.1 828,936 - -1.5 828,979 - +0.3 828,979 - +0.3 828,985 - -1.0 829,044 + +0.8 829,044 + +0.6 829,044 + -0.2 829,044 + +1.2 829,044 + -0.1 829,099 - -0.5 829,166 + +0.2 829,175 - +0.2 829,186 - -0.2 829,187 + +1.2 829,187 + +1.6 829,187 + +0.2 829,187 + +1.5 829,187 + +0.8 829,187 + +0.7 829,187 + +0.3 829,187 + +0.4 829,188 - -0.4 829,188 - +0.9 829,188 - +0.6 829,188 - -0.0 829,191 - +0.6 829,220 - +1.1 829,252 + +1.2 829,253 - -0.5 829,269 + +0.5 829,270 - +0.5 829,270 - -0.5 829,270 - -0.0 829,302 + +1.6 829,302 + +0.1 829,302 + +0.6 829,375 + +0.4 829,375 + -0.3 829,376 - +0.6 829,391 - +0.2 829,405 + +0.8 829,437 - +0.1 829,444 - +0.6 829,447 + +0.3 829,448 - +0.3 829,448 - -1.3 829,467 + +0.1 829,618 + +0.2 829,618 + -0.4 829,643 - +0.1 829,643 - -0.7 829,644 + +0.8 829,644 + -0.1 829,645 - +1.0 829,645 - +0.4 829,645 - +0.8 829,645 - +1.5 829,708 - -0.2 829,748 - +1.1 829,804 - IAI46_03805 0.12 +0.4 829,852 + IAI46_03805 0.27 +0.6 829,853 - IAI46_03805 0.28 -1.0 829,880 - IAI46_03805 0.36 +0.2 829,948 + IAI46_03805 0.58 -1.6 829,950 + IAI46_03805 0.58 +1.1 829,950 + IAI46_03805 0.58 +0.7 829,950 + IAI46_03805 0.58 -0.1 829,950 + IAI46_03805 0.58 +0.1 829,951 - IAI46_03805 0.58 -0.7 829,983 + IAI46_03805 0.69 +0.5 830,012 + IAI46_03805 0.78 +0.1 830,013 - IAI46_03805 0.78 +0.2 830,081 - +2.1 830,099 + +0.2 830,099 + -0.9 830,100 - +0.3 830,104 + +0.3 830,104 + -0.9 830,104 + -0.4 830,104 + +0.3 830,105 - -0.8 830,129 - +0.0 830,129 - -0.9 830,129 - -1.5 830,154 - +0.8 830,168 + -0.9 830,168 + +1.9 830,168 + +0.5 830,168 + -0.1 830,169 - +1.9 830,245 + IAI46_03810 0.11 -0.2 830,245 + IAI46_03810 0.11 +1.2 830,245 + IAI46_03810 0.11 -0.7 830,246 - IAI46_03810 0.11 -0.7 830,246 - IAI46_03810 0.11 +0.6 830,291 - IAI46_03810 0.14 -1.6 830,320 + IAI46_03810 0.17 +0.6 830,320 + IAI46_03810 0.17 -0.9 830,353 - IAI46_03810 0.19 +0.3 830,353 - IAI46_03810 0.19 -0.4 830,372 + IAI46_03810 0.20 +0.1 830,372 + IAI46_03810 0.20 -0.1 830,372 + IAI46_03810 0.20 -0.7 830,372 + IAI46_03810 0.20 -0.4 830,373 - IAI46_03810 0.20 +0.7 830,373 - IAI46_03810 0.20 +0.2 830,373 - IAI46_03810 0.20 +1.2 830,373 - IAI46_03810 0.20 -0.0 830,423 + IAI46_03810 0.24 -0.6 830,424 - IAI46_03810 0.24 +0.7 830,424 - IAI46_03810 0.24 +0.5 830,449 + IAI46_03810 0.26 +0.6 830,450 - IAI46_03810 0.26 +0.4 830,468 + IAI46_03810 0.27 +0.1 830,502 + IAI46_03810 0.30 +0.7 830,502 + IAI46_03810 0.30 +0.3 830,502 + IAI46_03810 0.30 -0.1 830,503 - IAI46_03810 0.30 +0.7 830,503 - IAI46_03810 0.30 -0.6 830,516 + IAI46_03810 0.31 -0.3 830,583 - IAI46_03810 0.36 -0.2 830,630 - IAI46_03810 0.39 +0.2 830,630 - IAI46_03810 0.39 +1.3 830,630 - IAI46_03810 0.39 +1.1 830,630 - IAI46_03810 0.39 +0.4 830,630 - IAI46_03810 0.39 +0.5 830,707 - IAI46_03810 0.45 -1.7 830,802 + IAI46_03810 0.52 +0.1 830,802 + IAI46_03810 0.52 -0.1 830,802 + IAI46_03810 0.52 +0.1 830,803 - IAI46_03810 0.52 +0.6 830,803 - IAI46_03810 0.52 -0.6 830,803 - IAI46_03810 0.52 +0.1 830,803 - IAI46_03810 0.52 +1.3 830,913 + IAI46_03810 0.60 -1.6 830,913 + IAI46_03810 0.60 +0.0 830,914 - IAI46_03810 0.60 +0.4 830,914 - IAI46_03810 0.60 +0.2 830,914 - IAI46_03810 0.60 +0.8 830,914 - IAI46_03810 0.60 -0.2 830,922 + IAI46_03810 0.61 -0.7 830,922 + IAI46_03810 0.61 -0.3 830,922 + IAI46_03810 0.61 -0.4 830,923 - IAI46_03810 0.61 +0.5 830,923 - IAI46_03810 0.61 -0.7 830,923 - IAI46_03810 0.61 +0.8 830,923 - IAI46_03810 0.61 +0.7 830,966 + IAI46_03810 0.64 +0.4 830,966 + IAI46_03810 0.64 +0.5 830,966 + IAI46_03810 0.64 -0.1 830,967 - IAI46_03810 0.64 +0.8 830,967 - IAI46_03810 0.64 +0.5 830,967 - IAI46_03810 0.64 -0.4 830,994 + IAI46_03810 0.66 -0.3 830,994 + IAI46_03810 0.66 -0.4 830,994 + IAI46_03810 0.66 +0.2 830,994 + IAI46_03810 0.66 -0.1 830,994 + IAI46_03810 0.66 +0.3 830,995 - IAI46_03810 0.66 -0.3 830,995 - IAI46_03810 0.66 +1.1 830,995 - IAI46_03810 0.66 +1.0 830,995 - IAI46_03810 0.66 -0.3 830,996 + IAI46_03810 0.66 -1.7 830,996 + IAI46_03810 0.66 -0.7 830,997 - IAI46_03810 0.66 -0.5 830,997 - IAI46_03810 0.66 +0.7 830,997 - IAI46_03810 0.66 -0.4 831,001 - IAI46_03810 0.67 +0.2 831,001 - IAI46_03810 0.67 +0.1 831,021 - IAI46_03810 0.68 -0.4 831,036 - IAI46_03810 0.69 -1.7
Or see this region's nucleotide sequence