Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02190 and IAI46_02195 are separated by 177 nucleotides IAI46_02195 and IAI46_02200 overlap by 4 nucleotides IAI46_02200 and IAI46_02205 are separated by 68 nucleotides IAI46_02205 and IAI46_02210 overlap by 4 nucleotides
IAI46_02190: IAI46_02190 - S-type pyocin domain-containing protein, at 461,491 to 462,057
_02190
IAI46_02195: IAI46_02195 - colicin-D, at 462,235 to 462,501
_02195
IAI46_02200: IAI46_02200 - S-type pyocin domain-containing protein, at 462,498 to 463,001
_02200
IAI46_02205: IAI46_02205 - hypothetical protein, at 463,070 to 463,342
_02205
IAI46_02210: IAI46_02210 - S-type pyocin domain-containing protein, at 463,339 to 464,259
_02210
Position (kb) 462
463
464 Strain fitness (log2 ratio) -1
0
1
2 at 461.522 kb on + strand at 461.608 kb on - strand, within IAI46_02190 at 461.619 kb on + strand, within IAI46_02190 at 461.619 kb on + strand, within IAI46_02190 at 461.619 kb on + strand, within IAI46_02190 at 461.619 kb on + strand, within IAI46_02190 at 461.620 kb on - strand, within IAI46_02190 at 461.659 kb on - strand, within IAI46_02190 at 461.988 kb on + strand, within IAI46_02190 at 461.988 kb on + strand, within IAI46_02190 at 461.988 kb on + strand, within IAI46_02190 at 461.988 kb on + strand, within IAI46_02190 at 461.989 kb on - strand, within IAI46_02190 at 461.989 kb on - strand, within IAI46_02190 at 461.989 kb on - strand, within IAI46_02190 at 462.025 kb on + strand at 462.031 kb on + strand at 462.032 kb on - strand at 462.047 kb on - strand at 462.047 kb on - strand at 462.140 kb on - strand at 462.140 kb on - strand at 462.140 kb on - strand at 462.140 kb on - strand at 462.232 kb on - strand at 462.646 kb on + strand, within IAI46_02200 at 462.917 kb on + strand, within IAI46_02200 at 462.946 kb on + strand, within IAI46_02200 at 462.971 kb on + strand at 463.002 kb on + strand at 463.145 kb on - strand, within IAI46_02205 at 463.175 kb on + strand, within IAI46_02205 at 463.331 kb on + strand at 463.345 kb on + strand at 463.392 kb on + strand at 463.393 kb on - strand at 463.395 kb on - strand at 463.395 kb on - strand at 463.397 kb on - strand at 463.397 kb on - strand at 463.397 kb on - strand at 463.413 kb on + strand at 463.424 kb on + strand at 463.433 kb on - strand, within IAI46_02210 at 463.453 kb on - strand, within IAI46_02210 at 463.453 kb on - strand, within IAI46_02210 at 463.453 kb on - strand, within IAI46_02210 at 463.459 kb on + strand, within IAI46_02210 at 463.507 kb on - strand, within IAI46_02210 at 463.507 kb on - strand, within IAI46_02210 at 463.511 kb on + strand, within IAI46_02210 at 463.609 kb on + strand, within IAI46_02210 at 463.610 kb on - strand, within IAI46_02210 at 463.610 kb on - strand, within IAI46_02210 at 463.617 kb on + strand, within IAI46_02210 at 463.617 kb on + strand, within IAI46_02210 at 463.618 kb on - strand, within IAI46_02210 at 463.618 kb on - strand, within IAI46_02210 at 463.644 kb on + strand, within IAI46_02210 at 463.654 kb on + strand, within IAI46_02210 at 463.654 kb on + strand, within IAI46_02210 at 463.655 kb on - strand, within IAI46_02210 at 463.655 kb on - strand, within IAI46_02210 at 463.683 kb on + strand, within IAI46_02210 at 463.732 kb on - strand, within IAI46_02210 at 463.736 kb on + strand, within IAI46_02210 at 463.737 kb on - strand, within IAI46_02210 at 463.737 kb on - strand, within IAI46_02210 at 463.737 kb on - strand, within IAI46_02210 at 463.737 kb on - strand, within IAI46_02210 at 463.767 kb on + strand, within IAI46_02210 at 463.768 kb on - strand, within IAI46_02210 at 463.800 kb on - strand, within IAI46_02210 at 463.965 kb on + strand, within IAI46_02210 at 463.966 kb on - strand, within IAI46_02210 at 463.966 kb on - strand, within IAI46_02210
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 461,522 + -0.1 461,608 - IAI46_02190 0.21 +0.1 461,619 + IAI46_02190 0.23 -0.6 461,619 + IAI46_02190 0.23 -0.8 461,619 + IAI46_02190 0.23 +0.3 461,619 + IAI46_02190 0.23 -0.2 461,620 - IAI46_02190 0.23 +0.7 461,659 - IAI46_02190 0.30 +0.8 461,988 + IAI46_02190 0.88 +0.2 461,988 + IAI46_02190 0.88 +0.2 461,988 + IAI46_02190 0.88 +0.6 461,988 + IAI46_02190 0.88 -1.7 461,989 - IAI46_02190 0.88 +0.1 461,989 - IAI46_02190 0.88 +1.3 461,989 - IAI46_02190 0.88 -1.3 462,025 + -0.3 462,031 + -0.1 462,032 - +0.6 462,047 - -0.3 462,047 - +1.1 462,140 - +0.2 462,140 - +0.6 462,140 - +1.1 462,140 - -0.4 462,232 - +0.3 462,646 + IAI46_02200 0.29 -0.5 462,917 + IAI46_02200 0.83 -0.1 462,946 + IAI46_02200 0.89 -0.6 462,971 + -0.0 463,002 + -0.4 463,145 - IAI46_02205 0.27 +0.5 463,175 + IAI46_02205 0.38 -0.4 463,331 + +0.5 463,345 + -1.4 463,392 + +0.4 463,393 - +0.2 463,395 - +0.4 463,395 - +0.5 463,397 - +1.9 463,397 - -0.2 463,397 - +1.2 463,413 + -0.9 463,424 + -0.1 463,433 - IAI46_02210 0.10 +2.1 463,453 - IAI46_02210 0.12 +0.2 463,453 - IAI46_02210 0.12 -0.3 463,453 - IAI46_02210 0.12 +0.5 463,459 + IAI46_02210 0.13 -0.6 463,507 - IAI46_02210 0.18 -1.0 463,507 - IAI46_02210 0.18 +1.6 463,511 + IAI46_02210 0.19 -0.0 463,609 + IAI46_02210 0.29 -0.9 463,610 - IAI46_02210 0.29 +0.5 463,610 - IAI46_02210 0.29 -0.3 463,617 + IAI46_02210 0.30 +0.4 463,617 + IAI46_02210 0.30 +0.3 463,618 - IAI46_02210 0.30 -0.0 463,618 - IAI46_02210 0.30 -0.4 463,644 + IAI46_02210 0.33 -1.6 463,654 + IAI46_02210 0.34 +0.4 463,654 + IAI46_02210 0.34 +0.5 463,655 - IAI46_02210 0.34 +1.6 463,655 - IAI46_02210 0.34 +0.2 463,683 + IAI46_02210 0.37 -1.7 463,732 - IAI46_02210 0.43 +0.1 463,736 + IAI46_02210 0.43 +0.3 463,737 - IAI46_02210 0.43 -0.6 463,737 - IAI46_02210 0.43 +0.5 463,737 - IAI46_02210 0.43 +1.3 463,737 - IAI46_02210 0.43 +0.1 463,767 + IAI46_02210 0.46 -0.5 463,768 - IAI46_02210 0.47 -0.5 463,800 - IAI46_02210 0.50 +1.0 463,965 + IAI46_02210 0.68 -0.4 463,966 - IAI46_02210 0.68 +1.1 463,966 - IAI46_02210 0.68 +0.7
Or see this region's nucleotide sequence