Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4360 and EX28DRAFT_4361 are separated by 155 nucleotides EX28DRAFT_4361 and EX28DRAFT_4362 are separated by 34 nucleotides EX28DRAFT_4362 and EX28DRAFT_4363 are separated by 39 nucleotides
EX28DRAFT_4360: EX28DRAFT_4360 - 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases, at 25,735 to 26,625
_4360
EX28DRAFT_4361: EX28DRAFT_4361 - Sugar kinases, ribokinase family, at 26,781 to 27,677
_4361
EX28DRAFT_4362: EX28DRAFT_4362 - transcriptional regulator, DeoR family, at 27,712 to 28,506
_4362
EX28DRAFT_4363: EX28DRAFT_4363 - outer membrane autotransporter barrel domain, at 28,546 to 31,473
_4363
Position (kb) 26
27
28 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 26.099 kb on + strand, within EX28DRAFT_4360 at 26.100 kb on - strand, within EX28DRAFT_4360 at 26.100 kb on - strand, within EX28DRAFT_4360 at 26.103 kb on + strand, within EX28DRAFT_4360 at 26.110 kb on - strand, within EX28DRAFT_4360 at 26.347 kb on - strand, within EX28DRAFT_4360 at 26.347 kb on - strand, within EX28DRAFT_4360 at 26.727 kb on + strand at 26.745 kb on - strand at 26.862 kb on + strand at 26.862 kb on + strand at 26.863 kb on - strand at 27.030 kb on - strand, within EX28DRAFT_4361 at 27.109 kb on - strand, within EX28DRAFT_4361 at 27.154 kb on + strand, within EX28DRAFT_4361 at 27.181 kb on + strand, within EX28DRAFT_4361 at 27.408 kb on + strand, within EX28DRAFT_4361 at 27.408 kb on + strand, within EX28DRAFT_4361 at 27.482 kb on - strand, within EX28DRAFT_4361 at 27.629 kb on + strand at 27.631 kb on + strand at 27.783 kb on + strand at 27.988 kb on + strand, within EX28DRAFT_4362 at 27.989 kb on - strand, within EX28DRAFT_4362 at 28.009 kb on - strand, within EX28DRAFT_4362 at 28.066 kb on - strand, within EX28DRAFT_4362 at 28.066 kb on - strand, within EX28DRAFT_4362 at 28.116 kb on + strand, within EX28DRAFT_4362 at 28.116 kb on + strand, within EX28DRAFT_4362 at 28.462 kb on - strand at 28.496 kb on - strand at 28.560 kb on - strand at 28.592 kb on + strand at 28.592 kb on + strand at 28.593 kb on - strand at 28.630 kb on + strand at 28.647 kb on + strand at 28.651 kb on - strand at 28.660 kb on + strand at 28.660 kb on + strand at 28.661 kb on - strand at 28.671 kb on + strand at 28.671 kb on + strand at 28.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 26,099 + EX28DRAFT_4360 0.41 -0.4 26,100 - EX28DRAFT_4360 0.41 +0.4 26,100 - EX28DRAFT_4360 0.41 -1.1 26,103 + EX28DRAFT_4360 0.41 +0.2 26,110 - EX28DRAFT_4360 0.42 -0.2 26,347 - EX28DRAFT_4360 0.69 +1.3 26,347 - EX28DRAFT_4360 0.69 -0.6 26,727 + -0.9 26,745 - -0.1 26,862 + +0.8 26,862 + -0.0 26,863 - -0.3 27,030 - EX28DRAFT_4361 0.28 +1.1 27,109 - EX28DRAFT_4361 0.37 -0.1 27,154 + EX28DRAFT_4361 0.42 +0.3 27,181 + EX28DRAFT_4361 0.45 +0.2 27,408 + EX28DRAFT_4361 0.70 +0.1 27,408 + EX28DRAFT_4361 0.70 +0.6 27,482 - EX28DRAFT_4361 0.78 -0.1 27,629 + +0.6 27,631 + -0.2 27,783 + +0.3 27,988 + EX28DRAFT_4362 0.35 +0.8 27,989 - EX28DRAFT_4362 0.35 -0.1 28,009 - EX28DRAFT_4362 0.37 +0.2 28,066 - EX28DRAFT_4362 0.45 -0.0 28,066 - EX28DRAFT_4362 0.45 -1.5 28,116 + EX28DRAFT_4362 0.51 -0.4 28,116 + EX28DRAFT_4362 0.51 -0.1 28,462 - -0.1 28,496 - -0.0 28,560 - +0.7 28,592 + -0.1 28,592 + -0.1 28,593 - -0.3 28,630 + +0.3 28,647 + +0.6 28,651 - +0.1 28,660 + -3.2 28,660 + +2.3 28,661 - -1.1 28,671 + +0.7 28,671 + +0.5 28,672 - -0.1
Or see this region's nucleotide sequence