Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4304 and EX28DRAFT_4305 are separated by 12 nucleotides EX28DRAFT_4305 and EX28DRAFT_4306 are separated by 108 nucleotides EX28DRAFT_4306 and EX28DRAFT_4307 are separated by 114 nucleotides
EX28DRAFT_4304: EX28DRAFT_4304 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 107,640 to 108,509
_4304
EX28DRAFT_4305: EX28DRAFT_4305 - chorismate lyase (EC 4.1.3.40), at 108,522 to 109,091
_4305
EX28DRAFT_4306: EX28DRAFT_4306 - Maltose operon periplasmic protein precursor (MalM), at 109,200 to 110,153
_4306
EX28DRAFT_4307: EX28DRAFT_4307 - Maltoporin (phage lambda and maltose receptor), at 110,268 to 111,581
_4307
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 108.527 kb on - strand at 109.035 kb on - strand at 109.035 kb on - strand at 109.038 kb on + strand at 109.038 kb on + strand at 109.038 kb on + strand at 109.039 kb on - strand at 109.039 kb on - strand at 109.039 kb on - strand at 109.043 kb on + strand at 109.043 kb on + strand at 109.044 kb on - strand at 109.044 kb on - strand at 109.054 kb on + strand at 109.054 kb on + strand at 109.055 kb on - strand at 109.090 kb on - strand at 109.215 kb on + strand at 109.337 kb on - strand, within EX28DRAFT_4306 at 109.337 kb on - strand, within EX28DRAFT_4306 at 109.432 kb on + strand, within EX28DRAFT_4306 at 109.451 kb on + strand, within EX28DRAFT_4306 at 109.456 kb on - strand, within EX28DRAFT_4306 at 109.520 kb on + strand, within EX28DRAFT_4306 at 109.520 kb on + strand, within EX28DRAFT_4306 at 109.632 kb on - strand, within EX28DRAFT_4306 at 109.637 kb on + strand, within EX28DRAFT_4306 at 109.637 kb on + strand, within EX28DRAFT_4306 at 109.651 kb on - strand, within EX28DRAFT_4306 at 109.681 kb on + strand, within EX28DRAFT_4306 at 109.681 kb on + strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 110.157 kb on + strand at 110.157 kb on + strand at 110.158 kb on - strand at 110.158 kb on - strand at 110.158 kb on - strand at 110.161 kb on - strand at 110.197 kb on + strand at 110.243 kb on - strand at 110.250 kb on + strand at 110.251 kb on - strand at 110.251 kb on - strand at 110.269 kb on + strand at 110.269 kb on + strand at 110.369 kb on - strand at 110.493 kb on - strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.588 kb on - strand, within EX28DRAFT_4307 at 110.591 kb on + strand, within EX28DRAFT_4307 at 110.653 kb on + strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.781 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.890 kb on + strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.149 kb on - strand, within EX28DRAFT_4307 at 111.152 kb on - strand, within EX28DRAFT_4307
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 108,527 - -0.8 109,035 - -0.2 109,035 - -1.0 109,038 + -0.1 109,038 + +1.2 109,038 + +0.4 109,039 - -0.4 109,039 - +0.5 109,039 - +1.5 109,043 + +0.3 109,043 + +0.5 109,044 - +0.8 109,044 - -0.5 109,054 + -0.5 109,054 + +0.9 109,055 - -0.3 109,090 - -0.3 109,215 + +0.3 109,337 - EX28DRAFT_4306 0.14 -0.4 109,337 - EX28DRAFT_4306 0.14 -0.2 109,432 + EX28DRAFT_4306 0.24 +1.5 109,451 + EX28DRAFT_4306 0.26 +0.5 109,456 - EX28DRAFT_4306 0.27 -1.2 109,520 + EX28DRAFT_4306 0.34 +0.8 109,520 + EX28DRAFT_4306 0.34 -1.1 109,632 - EX28DRAFT_4306 0.45 -0.6 109,637 + EX28DRAFT_4306 0.46 -0.8 109,637 + EX28DRAFT_4306 0.46 -0.2 109,651 - EX28DRAFT_4306 0.47 -1.3 109,681 + EX28DRAFT_4306 0.50 +0.5 109,681 + EX28DRAFT_4306 0.50 -0.6 109,682 - EX28DRAFT_4306 0.51 -0.7 109,682 - EX28DRAFT_4306 0.51 +0.2 109,682 - EX28DRAFT_4306 0.51 +0.1 109,766 + EX28DRAFT_4306 0.59 -1.6 109,766 + EX28DRAFT_4306 0.59 +0.6 109,766 + EX28DRAFT_4306 0.59 -0.4 109,766 + EX28DRAFT_4306 0.59 -0.5 109,766 + EX28DRAFT_4306 0.59 -0.7 109,767 - EX28DRAFT_4306 0.59 -1.9 109,767 - EX28DRAFT_4306 0.59 -0.5 109,767 - EX28DRAFT_4306 0.59 -0.5 110,157 + +2.2 110,157 + +0.4 110,158 - -0.5 110,158 - -0.1 110,158 - -1.4 110,161 - +0.4 110,197 + -0.4 110,243 - -1.7 110,250 + +0.1 110,251 - -1.9 110,251 - +1.0 110,269 + -0.1 110,269 + -0.1 110,369 - -0.1 110,493 - EX28DRAFT_4307 0.17 -0.6 110,587 + EX28DRAFT_4307 0.24 +1.1 110,587 + EX28DRAFT_4307 0.24 -0.2 110,587 + EX28DRAFT_4307 0.24 -0.8 110,587 + EX28DRAFT_4307 0.24 -0.1 110,587 + EX28DRAFT_4307 0.24 -0.6 110,587 + EX28DRAFT_4307 0.24 -0.2 110,588 - EX28DRAFT_4307 0.24 +0.1 110,591 + EX28DRAFT_4307 0.25 +0.4 110,653 + EX28DRAFT_4307 0.29 +0.1 110,654 - EX28DRAFT_4307 0.29 +1.2 110,654 - EX28DRAFT_4307 0.29 +0.5 110,657 + EX28DRAFT_4307 0.30 -1.7 110,657 + EX28DRAFT_4307 0.30 +1.2 110,665 + EX28DRAFT_4307 0.30 +1.2 110,665 + EX28DRAFT_4307 0.30 +0.4 110,665 + EX28DRAFT_4307 0.30 +0.5 110,666 - EX28DRAFT_4307 0.30 -1.4 110,666 - EX28DRAFT_4307 0.30 +0.2 110,780 + EX28DRAFT_4307 0.39 -0.0 110,780 + EX28DRAFT_4307 0.39 +0.4 110,780 + EX28DRAFT_4307 0.39 +0.9 110,781 - EX28DRAFT_4307 0.39 +0.1 110,888 - EX28DRAFT_4307 0.47 -1.4 110,888 - EX28DRAFT_4307 0.47 -0.0 110,890 + EX28DRAFT_4307 0.47 -0.8 110,891 - EX28DRAFT_4307 0.47 -0.6 110,891 - EX28DRAFT_4307 0.47 -1.2 110,891 - EX28DRAFT_4307 0.47 +0.3 111,011 + EX28DRAFT_4307 0.57 -0.8 111,011 + EX28DRAFT_4307 0.57 +1.0 111,012 - EX28DRAFT_4307 0.57 -0.1 111,012 - EX28DRAFT_4307 0.57 -0.5 111,012 - EX28DRAFT_4307 0.57 +0.1 111,149 - EX28DRAFT_4307 0.67 +0.1 111,152 - EX28DRAFT_4307 0.67 +0.2
Or see this region's nucleotide sequence