Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2573 and EX28DRAFT_2574 are separated by 409 nucleotides EX28DRAFT_2574 and EX28DRAFT_2575 are separated by 21 nucleotides EX28DRAFT_2575 and EX28DRAFT_2576 are separated by 187 nucleotides
EX28DRAFT_2573: EX28DRAFT_2573 - branched-chain amino acid uptake carrier, at 2,607,067 to 2,608,386
_2573
EX28DRAFT_2574: EX28DRAFT_2574 - phosphate regulon sensor kinase PhoR, at 2,608,796 to 2,610,091
_2574
EX28DRAFT_2575: EX28DRAFT_2575 - phosphate regulon transcriptional regulatory protein PhoB, at 2,610,113 to 2,610,802
_2575
EX28DRAFT_2576: EX28DRAFT_2576 - Exodeoxyribonuclease I subunit D (EC 3.1.11.1), at 2,610,990 to 2,612,195
_2576
Position (kb)
2608
2609
2610
2611 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2607.806 kb on + strand, within EX28DRAFT_2573 at 2607.807 kb on - strand, within EX28DRAFT_2573 at 2607.846 kb on - strand, within EX28DRAFT_2573 at 2608.001 kb on + strand, within EX28DRAFT_2573 at 2608.002 kb on - strand, within EX28DRAFT_2573 at 2608.013 kb on + strand, within EX28DRAFT_2573 at 2608.013 kb on + strand, within EX28DRAFT_2573 at 2608.283 kb on - strand at 2608.342 kb on - strand at 2608.342 kb on - strand at 2608.373 kb on - strand at 2608.387 kb on - strand at 2608.537 kb on + strand at 2608.578 kb on + strand at 2608.777 kb on + strand at 2608.817 kb on + strand at 2608.996 kb on + strand, within EX28DRAFT_2574 at 2608.997 kb on - strand, within EX28DRAFT_2574 at 2609.036 kb on - strand, within EX28DRAFT_2574 at 2609.096 kb on - strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.113 kb on - strand, within EX28DRAFT_2574 at 2609.171 kb on - strand, within EX28DRAFT_2574 at 2609.539 kb on + strand, within EX28DRAFT_2574 at 2609.629 kb on - strand, within EX28DRAFT_2574 at 2609.834 kb on - strand, within EX28DRAFT_2574 at 2609.837 kb on - strand, within EX28DRAFT_2574 at 2609.862 kb on + strand, within EX28DRAFT_2574 at 2609.905 kb on + strand, within EX28DRAFT_2574 at 2609.906 kb on - strand, within EX28DRAFT_2574 at 2610.044 kb on + strand at 2610.044 kb on + strand at 2610.208 kb on + strand, within EX28DRAFT_2575 at 2610.212 kb on + strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.213 kb on - strand, within EX28DRAFT_2575 at 2610.237 kb on + strand, within EX28DRAFT_2575 at 2610.238 kb on - strand, within EX28DRAFT_2575 at 2610.238 kb on - strand, within EX28DRAFT_2575 at 2610.238 kb on - strand, within EX28DRAFT_2575 at 2610.244 kb on + strand, within EX28DRAFT_2575 at 2610.259 kb on + strand, within EX28DRAFT_2575 at 2610.331 kb on + strand, within EX28DRAFT_2575 at 2610.455 kb on - strand, within EX28DRAFT_2575 at 2610.455 kb on - strand, within EX28DRAFT_2575 at 2610.493 kb on + strand, within EX28DRAFT_2575 at 2610.493 kb on + strand, within EX28DRAFT_2575 at 2610.498 kb on + strand, within EX28DRAFT_2575 at 2610.498 kb on + strand, within EX28DRAFT_2575 at 2610.498 kb on + strand, within EX28DRAFT_2575 at 2610.499 kb on - strand, within EX28DRAFT_2575 at 2610.700 kb on - strand, within EX28DRAFT_2575 at 2610.779 kb on + strand at 2610.779 kb on + strand at 2610.791 kb on - strand at 2610.818 kb on - strand at 2610.818 kb on - strand at 2610.822 kb on + strand at 2610.855 kb on + strand at 2610.856 kb on - strand at 2610.856 kb on - strand at 2610.919 kb on + strand at 2610.919 kb on + strand at 2610.920 kb on - strand at 2610.955 kb on + strand at 2610.955 kb on + strand at 2610.956 kb on - strand at 2610.989 kb on + strand at 2610.989 kb on + strand at 2610.997 kb on + strand at 2610.997 kb on + strand at 2610.997 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,607,806 + EX28DRAFT_2573 0.56 -0.0 2,607,807 - EX28DRAFT_2573 0.56 +1.4 2,607,846 - EX28DRAFT_2573 0.59 -0.8 2,608,001 + EX28DRAFT_2573 0.71 -0.7 2,608,002 - EX28DRAFT_2573 0.71 -0.2 2,608,013 + EX28DRAFT_2573 0.72 +0.9 2,608,013 + EX28DRAFT_2573 0.72 +0.6 2,608,283 - +0.6 2,608,342 - +0.2 2,608,342 - -0.9 2,608,373 - +0.0 2,608,387 - -0.1 2,608,537 + -0.3 2,608,578 + -0.2 2,608,777 + -3.3 2,608,817 + -0.5 2,608,996 + EX28DRAFT_2574 0.15 -0.4 2,608,997 - EX28DRAFT_2574 0.16 -0.7 2,609,036 - EX28DRAFT_2574 0.19 -0.1 2,609,096 - EX28DRAFT_2574 0.23 -0.2 2,609,112 + EX28DRAFT_2574 0.24 -0.4 2,609,112 + EX28DRAFT_2574 0.24 -0.8 2,609,112 + EX28DRAFT_2574 0.24 +2.3 2,609,112 + EX28DRAFT_2574 0.24 +0.1 2,609,112 + EX28DRAFT_2574 0.24 -0.5 2,609,113 - EX28DRAFT_2574 0.24 -0.7 2,609,171 - EX28DRAFT_2574 0.29 +0.2 2,609,539 + EX28DRAFT_2574 0.57 +0.4 2,609,629 - EX28DRAFT_2574 0.64 -0.6 2,609,834 - EX28DRAFT_2574 0.80 +0.1 2,609,837 - EX28DRAFT_2574 0.80 +0.4 2,609,862 + EX28DRAFT_2574 0.82 -1.3 2,609,905 + EX28DRAFT_2574 0.86 -0.7 2,609,906 - EX28DRAFT_2574 0.86 +0.5 2,610,044 + -0.8 2,610,044 + -0.3 2,610,208 + EX28DRAFT_2575 0.14 -0.6 2,610,212 + EX28DRAFT_2575 0.14 +0.6 2,610,213 - EX28DRAFT_2575 0.14 -0.3 2,610,213 - EX28DRAFT_2575 0.14 -0.7 2,610,213 - EX28DRAFT_2575 0.14 -1.3 2,610,213 - EX28DRAFT_2575 0.14 -0.1 2,610,237 + EX28DRAFT_2575 0.18 +0.2 2,610,238 - EX28DRAFT_2575 0.18 -0.3 2,610,238 - EX28DRAFT_2575 0.18 +0.1 2,610,238 - EX28DRAFT_2575 0.18 -2.6 2,610,244 + EX28DRAFT_2575 0.19 +0.2 2,610,259 + EX28DRAFT_2575 0.21 +0.4 2,610,331 + EX28DRAFT_2575 0.32 +1.1 2,610,455 - EX28DRAFT_2575 0.50 +0.6 2,610,455 - EX28DRAFT_2575 0.50 -0.3 2,610,493 + EX28DRAFT_2575 0.55 -0.6 2,610,493 + EX28DRAFT_2575 0.55 +0.6 2,610,498 + EX28DRAFT_2575 0.56 -0.0 2,610,498 + EX28DRAFT_2575 0.56 +0.8 2,610,498 + EX28DRAFT_2575 0.56 -0.1 2,610,499 - EX28DRAFT_2575 0.56 +1.2 2,610,700 - EX28DRAFT_2575 0.85 +0.0 2,610,779 + -0.5 2,610,779 + +0.7 2,610,791 - -0.7 2,610,818 - -0.4 2,610,818 - +0.2 2,610,822 + -2.2 2,610,855 + +0.3 2,610,856 - -0.3 2,610,856 - -0.0 2,610,919 + -0.0 2,610,919 + -0.3 2,610,920 - +0.9 2,610,955 + -1.6 2,610,955 + -0.5 2,610,956 - -1.2 2,610,989 + -0.8 2,610,989 + -1.6 2,610,997 + -0.1 2,610,997 + +0.3 2,610,997 + -0.5
Or see this region's nucleotide sequence