Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2146 and EX28DRAFT_2147 are separated by 90 nucleotides EX28DRAFT_2147 and EX28DRAFT_2148 are separated by 222 nucleotides
EX28DRAFT_2146: EX28DRAFT_2146 - Alpha-glucosidases, family 31 of glycosyl hydrolases, at 2,168,490 to 2,170,853
_2146
EX28DRAFT_2147: EX28DRAFT_2147 - ATPase components of ABC transporters with duplicated ATPase domains, at 2,170,944 to 2,172,539
_2147
EX28DRAFT_2148: EX28DRAFT_2148 - Uncharacterized protein conserved in bacteria, at 2,172,762 to 2,173,682
_2148
Position (kb)
2170
2171
2172
2173 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2169.988 kb on - strand, within EX28DRAFT_2146 at 2169.989 kb on + strand, within EX28DRAFT_2146 at 2170.176 kb on + strand, within EX28DRAFT_2146 at 2170.237 kb on - strand, within EX28DRAFT_2146 at 2170.242 kb on + strand, within EX28DRAFT_2146 at 2170.243 kb on - strand, within EX28DRAFT_2146 at 2170.851 kb on + strand at 2170.851 kb on + strand at 2170.972 kb on + strand at 2170.973 kb on - strand at 2171.016 kb on - strand at 2171.090 kb on - strand at 2171.090 kb on - strand at 2171.231 kb on + strand, within EX28DRAFT_2147 at 2171.383 kb on + strand, within EX28DRAFT_2147 at 2171.708 kb on + strand, within EX28DRAFT_2147 at 2171.708 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.822 kb on - strand, within EX28DRAFT_2147 at 2171.830 kb on + strand, within EX28DRAFT_2147 at 2171.882 kb on + strand, within EX28DRAFT_2147 at 2172.172 kb on + strand, within EX28DRAFT_2147 at 2172.198 kb on - strand, within EX28DRAFT_2147 at 2172.199 kb on + strand, within EX28DRAFT_2147 at 2172.232 kb on + strand, within EX28DRAFT_2147 at 2172.233 kb on - strand, within EX28DRAFT_2147 at 2172.534 kb on + strand at 2172.534 kb on + strand at 2172.535 kb on - strand at 2172.535 kb on - strand at 2172.691 kb on + strand at 2172.691 kb on + strand at 2172.691 kb on + strand at 2172.691 kb on + strand at 2172.692 kb on - strand at 2172.692 kb on - strand at 2172.692 kb on - strand at 2172.693 kb on + strand at 2172.694 kb on - strand at 2172.694 kb on - strand at 2172.694 kb on - strand at 2172.722 kb on - strand at 2172.745 kb on + strand at 2172.745 kb on + strand at 2172.745 kb on + strand at 2172.746 kb on - strand at 2172.746 kb on - strand at 2172.746 kb on - strand at 2172.749 kb on + strand at 2172.749 kb on + strand at 2172.776 kb on - strand at 2172.925 kb on - strand, within EX28DRAFT_2148 at 2172.956 kb on + strand, within EX28DRAFT_2148 at 2172.990 kb on + strand, within EX28DRAFT_2148 at 2173.020 kb on - strand, within EX28DRAFT_2148 at 2173.092 kb on + strand, within EX28DRAFT_2148 at 2173.096 kb on - strand, within EX28DRAFT_2148 at 2173.096 kb on - strand, within EX28DRAFT_2148 at 2173.317 kb on + strand, within EX28DRAFT_2148 at 2173.506 kb on + strand, within EX28DRAFT_2148
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,169,988 - EX28DRAFT_2146 0.63 -0.5 2,169,989 + EX28DRAFT_2146 0.63 +0.1 2,170,176 + EX28DRAFT_2146 0.71 -1.6 2,170,237 - EX28DRAFT_2146 0.74 -0.4 2,170,242 + EX28DRAFT_2146 0.74 -0.4 2,170,243 - EX28DRAFT_2146 0.74 +2.3 2,170,851 + -0.4 2,170,851 + -0.6 2,170,972 + +0.3 2,170,973 - -1.5 2,171,016 - -0.2 2,171,090 - +1.1 2,171,090 - +0.3 2,171,231 + EX28DRAFT_2147 0.18 -0.3 2,171,383 + EX28DRAFT_2147 0.28 -0.4 2,171,708 + EX28DRAFT_2147 0.48 -2.7 2,171,708 + EX28DRAFT_2147 0.48 -1.7 2,171,821 + EX28DRAFT_2147 0.55 +0.3 2,171,821 + EX28DRAFT_2147 0.55 -0.0 2,171,821 + EX28DRAFT_2147 0.55 +1.9 2,171,821 + EX28DRAFT_2147 0.55 -1.7 2,171,822 - EX28DRAFT_2147 0.55 +0.3 2,171,830 + EX28DRAFT_2147 0.56 +0.0 2,171,882 + EX28DRAFT_2147 0.59 -0.8 2,172,172 + EX28DRAFT_2147 0.77 -0.0 2,172,198 - EX28DRAFT_2147 0.79 +0.5 2,172,199 + EX28DRAFT_2147 0.79 -0.6 2,172,232 + EX28DRAFT_2147 0.81 -1.4 2,172,233 - EX28DRAFT_2147 0.81 -0.1 2,172,534 + -0.4 2,172,534 + -0.5 2,172,535 - +1.5 2,172,535 - +0.6 2,172,691 + -1.1 2,172,691 + +0.4 2,172,691 + -0.4 2,172,691 + +0.5 2,172,692 - -0.5 2,172,692 - -1.7 2,172,692 - -1.1 2,172,693 + -0.4 2,172,694 - +0.4 2,172,694 - +1.4 2,172,694 - -0.3 2,172,722 - +0.9 2,172,745 + +1.3 2,172,745 + -0.2 2,172,745 + +0.4 2,172,746 - +0.1 2,172,746 - +0.5 2,172,746 - +0.6 2,172,749 + +0.4 2,172,749 + -1.4 2,172,776 - -0.3 2,172,925 - EX28DRAFT_2148 0.18 -1.4 2,172,956 + EX28DRAFT_2148 0.21 -0.7 2,172,990 + EX28DRAFT_2148 0.25 -0.1 2,173,020 - EX28DRAFT_2148 0.28 +0.2 2,173,092 + EX28DRAFT_2148 0.36 +0.3 2,173,096 - EX28DRAFT_2148 0.36 -0.0 2,173,096 - EX28DRAFT_2148 0.36 +0.3 2,173,317 + EX28DRAFT_2148 0.60 -0.2 2,173,506 + EX28DRAFT_2148 0.81 -0.1
Or see this region's nucleotide sequence