Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1191 and EX28DRAFT_1192 are separated by 116 nucleotides EX28DRAFT_1192 and EX28DRAFT_1193 are separated by 82 nucleotides
EX28DRAFT_1191: EX28DRAFT_1191 - Mannitol-1-phosphate/altronate dehydrogenases, at 1,210,390 to 1,211,841
_1191
EX28DRAFT_1192: EX28DRAFT_1192 - Acetyltransferase (GNAT) family, at 1,211,958 to 1,212,485
_1192
EX28DRAFT_1193: EX28DRAFT_1193 - diguanylate cyclase (GGDEF) domain, at 1,212,568 to 1,213,533
_1193
Position (kb)
1211
1212
1213 Strain fitness (log2 ratio)
-1
0
1
2 at 1211.056 kb on - strand, within EX28DRAFT_1191 at 1211.056 kb on - strand, within EX28DRAFT_1191 at 1211.108 kb on + strand, within EX28DRAFT_1191 at 1211.108 kb on + strand, within EX28DRAFT_1191 at 1211.109 kb on - strand, within EX28DRAFT_1191 at 1211.318 kb on + strand, within EX28DRAFT_1191 at 1211.319 kb on - strand, within EX28DRAFT_1191 at 1211.319 kb on - strand, within EX28DRAFT_1191 at 1211.460 kb on - strand, within EX28DRAFT_1191 at 1211.537 kb on + strand, within EX28DRAFT_1191 at 1211.537 kb on + strand, within EX28DRAFT_1191 at 1211.538 kb on - strand, within EX28DRAFT_1191 at 1211.593 kb on + strand, within EX28DRAFT_1191 at 1211.634 kb on + strand, within EX28DRAFT_1191 at 1211.634 kb on + strand, within EX28DRAFT_1191 at 1211.634 kb on + strand, within EX28DRAFT_1191 at 1211.635 kb on - strand, within EX28DRAFT_1191 at 1211.637 kb on - strand, within EX28DRAFT_1191 at 1211.637 kb on - strand, within EX28DRAFT_1191 at 1211.718 kb on + strand at 1211.729 kb on - strand at 1211.942 kb on + strand at 1211.943 kb on - strand at 1211.943 kb on - strand at 1211.949 kb on - strand at 1211.956 kb on - strand at 1211.956 kb on - strand at 1211.962 kb on - strand at 1211.962 kb on - strand at 1211.969 kb on + strand at 1211.970 kb on - strand at 1211.971 kb on + strand at 1211.971 kb on + strand at 1211.971 kb on + strand at 1211.971 kb on + strand at 1212.016 kb on + strand, within EX28DRAFT_1192 at 1212.033 kb on + strand, within EX28DRAFT_1192 at 1212.059 kb on - strand, within EX28DRAFT_1192 at 1212.110 kb on + strand, within EX28DRAFT_1192 at 1212.110 kb on + strand, within EX28DRAFT_1192 at 1212.313 kb on - strand, within EX28DRAFT_1192 at 1212.360 kb on - strand, within EX28DRAFT_1192 at 1212.372 kb on - strand, within EX28DRAFT_1192 at 1212.479 kb on + strand at 1212.479 kb on + strand at 1212.480 kb on - strand at 1212.480 kb on - strand at 1212.523 kb on - strand at 1212.553 kb on + strand at 1212.553 kb on + strand at 1212.554 kb on - strand at 1212.554 kb on - strand at 1212.564 kb on + strand at 1212.603 kb on - strand at 1212.716 kb on + strand, within EX28DRAFT_1193 at 1212.717 kb on - strand, within EX28DRAFT_1193 at 1212.717 kb on - strand, within EX28DRAFT_1193 at 1212.717 kb on - strand, within EX28DRAFT_1193 at 1212.740 kb on + strand, within EX28DRAFT_1193 at 1212.906 kb on + strand, within EX28DRAFT_1193 at 1213.296 kb on + strand, within EX28DRAFT_1193 at 1213.315 kb on - strand, within EX28DRAFT_1193
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,211,056 - EX28DRAFT_1191 0.46 -0.7 1,211,056 - EX28DRAFT_1191 0.46 -0.2 1,211,108 + EX28DRAFT_1191 0.49 -0.3 1,211,108 + EX28DRAFT_1191 0.49 -0.8 1,211,109 - EX28DRAFT_1191 0.50 -0.1 1,211,318 + EX28DRAFT_1191 0.64 +0.8 1,211,319 - EX28DRAFT_1191 0.64 +0.1 1,211,319 - EX28DRAFT_1191 0.64 +0.3 1,211,460 - EX28DRAFT_1191 0.74 -0.6 1,211,537 + EX28DRAFT_1191 0.79 -0.6 1,211,537 + EX28DRAFT_1191 0.79 +0.4 1,211,538 - EX28DRAFT_1191 0.79 -0.7 1,211,593 + EX28DRAFT_1191 0.83 +0.7 1,211,634 + EX28DRAFT_1191 0.86 -0.2 1,211,634 + EX28DRAFT_1191 0.86 +0.5 1,211,634 + EX28DRAFT_1191 0.86 +0.1 1,211,635 - EX28DRAFT_1191 0.86 -0.3 1,211,637 - EX28DRAFT_1191 0.86 -1.4 1,211,637 - EX28DRAFT_1191 0.86 +1.0 1,211,718 + -0.8 1,211,729 - +1.0 1,211,942 + -0.2 1,211,943 - -0.2 1,211,943 - +0.4 1,211,949 - -0.3 1,211,956 - -0.8 1,211,956 - +0.5 1,211,962 - +0.5 1,211,962 - +0.1 1,211,969 + +0.4 1,211,970 - +0.1 1,211,971 + +0.8 1,211,971 + -0.2 1,211,971 + -1.0 1,211,971 + -0.4 1,212,016 + EX28DRAFT_1192 0.11 -0.1 1,212,033 + EX28DRAFT_1192 0.14 -0.3 1,212,059 - EX28DRAFT_1192 0.19 -0.5 1,212,110 + EX28DRAFT_1192 0.29 +0.6 1,212,110 + EX28DRAFT_1192 0.29 +0.5 1,212,313 - EX28DRAFT_1192 0.67 +1.0 1,212,360 - EX28DRAFT_1192 0.76 -1.3 1,212,372 - EX28DRAFT_1192 0.78 -0.4 1,212,479 + -0.3 1,212,479 + +0.2 1,212,480 - -0.9 1,212,480 - -0.0 1,212,523 - -0.4 1,212,553 + +1.7 1,212,553 + +0.1 1,212,554 - +1.1 1,212,554 - -0.1 1,212,564 + +0.2 1,212,603 - -0.4 1,212,716 + EX28DRAFT_1193 0.15 +0.2 1,212,717 - EX28DRAFT_1193 0.15 +2.1 1,212,717 - EX28DRAFT_1193 0.15 +0.4 1,212,717 - EX28DRAFT_1193 0.15 +0.1 1,212,740 + EX28DRAFT_1193 0.18 +2.0 1,212,906 + EX28DRAFT_1193 0.35 -0.0 1,213,296 + EX28DRAFT_1193 0.75 +0.1 1,213,315 - EX28DRAFT_1193 0.77 +1.3
Or see this region's nucleotide sequence