Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0991 and EX28DRAFT_0992 are separated by 155 nucleotides EX28DRAFT_0992 and EX28DRAFT_0993 overlap by 4 nucleotides
EX28DRAFT_0991: EX28DRAFT_0991 - transcriptional regulator, LacI family, at 993,079 to 994,089
_0991
EX28DRAFT_0992: EX28DRAFT_0992 - Predicted ATPase, at 994,245 to 995,642
_0992
EX28DRAFT_0993: EX28DRAFT_0993 - TIGR01620 family protein, at 995,639 to 996,691
_0993
Position (kb) 994
995
996 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 993.322 kb on + strand, within EX28DRAFT_0991 at 993.322 kb on + strand, within EX28DRAFT_0991 at 993.322 kb on + strand, within EX28DRAFT_0991 at 993.323 kb on - strand, within EX28DRAFT_0991 at 993.377 kb on - strand, within EX28DRAFT_0991 at 993.712 kb on + strand, within EX28DRAFT_0991 at 993.713 kb on - strand, within EX28DRAFT_0991 at 993.791 kb on - strand, within EX28DRAFT_0991 at 993.795 kb on + strand, within EX28DRAFT_0991 at 994.073 kb on + strand at 994.073 kb on + strand at 994.074 kb on - strand at 994.074 kb on - strand at 994.074 kb on - strand at 994.089 kb on + strand at 994.089 kb on + strand at 994.157 kb on + strand at 994.157 kb on + strand at 994.157 kb on + strand at 994.485 kb on + strand, within EX28DRAFT_0992 at 994.509 kb on + strand, within EX28DRAFT_0992 at 995.029 kb on - strand, within EX28DRAFT_0992 at 995.031 kb on + strand, within EX28DRAFT_0992 at 995.031 kb on + strand, within EX28DRAFT_0992 at 995.059 kb on - strand, within EX28DRAFT_0992 at 995.630 kb on + strand at 995.631 kb on - strand at 995.743 kb on + strand at 996.381 kb on + strand, within EX28DRAFT_0993 at 996.381 kb on + strand, within EX28DRAFT_0993 at 996.395 kb on + strand, within EX28DRAFT_0993 at 996.396 kb on - strand, within EX28DRAFT_0993 at 996.434 kb on - strand, within EX28DRAFT_0993 at 996.546 kb on + strand, within EX28DRAFT_0993
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 993,322 + EX28DRAFT_0991 0.24 -0.4 993,322 + EX28DRAFT_0991 0.24 -0.5 993,322 + EX28DRAFT_0991 0.24 -0.1 993,323 - EX28DRAFT_0991 0.24 -0.5 993,377 - EX28DRAFT_0991 0.29 +0.5 993,712 + EX28DRAFT_0991 0.63 -2.0 993,713 - EX28DRAFT_0991 0.63 -0.0 993,791 - EX28DRAFT_0991 0.70 -0.4 993,795 + EX28DRAFT_0991 0.71 +0.9 994,073 + -0.7 994,073 + -0.6 994,074 - -0.5 994,074 - -0.4 994,074 - -0.3 994,089 + -0.9 994,089 + +2.8 994,157 + +0.4 994,157 + -0.1 994,157 + -0.1 994,485 + EX28DRAFT_0992 0.17 -0.4 994,509 + EX28DRAFT_0992 0.19 -1.8 995,029 - EX28DRAFT_0992 0.56 +0.0 995,031 + EX28DRAFT_0992 0.56 +0.5 995,031 + EX28DRAFT_0992 0.56 -0.9 995,059 - EX28DRAFT_0992 0.58 -0.1 995,630 + +0.9 995,631 - +1.4 995,743 + +1.3 996,381 + EX28DRAFT_0993 0.70 -0.7 996,381 + EX28DRAFT_0993 0.70 +0.3 996,395 + EX28DRAFT_0993 0.72 +1.0 996,396 - EX28DRAFT_0993 0.72 -0.3 996,434 - EX28DRAFT_0993 0.75 -0.1 996,546 + EX28DRAFT_0993 0.86 +0.0
Or see this region's nucleotide sequence