Strain Fitness in Bosea sp. OAE506 around ABIE41_RS13920

Experiment: L-Malic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS13915 and ABIE41_RS13920 are separated by 4 nucleotidesABIE41_RS13920 and ABIE41_RS13925 are separated by 76 nucleotides ABIE41_RS13915: ABIE41_RS13915 - chromate efflux transporter, at 2,855,844 to 2,857,244 _RS13915 ABIE41_RS13920: ABIE41_RS13920 - hypothetical protein, at 2,857,249 to 2,857,566 _RS13920 ABIE41_RS13925: ABIE41_RS13925 - FAD-dependent monooxygenase, at 2,857,643 to 2,858,818 _RS13925 Position (kb) 2857 2858Strain fitness (log2 ratio) -2 -1 0 1at 2856.723 kb on + strand, within ABIE41_RS13915at 2856.723 kb on + strand, within ABIE41_RS13915at 2856.723 kb on + strand, within ABIE41_RS13915at 2856.723 kb on + strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.724 kb on - strand, within ABIE41_RS13915at 2856.889 kb on + strand, within ABIE41_RS13915at 2856.939 kb on + strand, within ABIE41_RS13915at 2856.940 kb on - strand, within ABIE41_RS13915at 2856.940 kb on - strand, within ABIE41_RS13915at 2856.940 kb on - strand, within ABIE41_RS13915at 2857.082 kb on - strand, within ABIE41_RS13915at 2857.082 kb on - strand, within ABIE41_RS13915at 2857.547 kb on + strandat 2857.548 kb on - strandat 2857.598 kb on + strandat 2857.598 kb on + strandat 2857.598 kb on + strandat 2857.603 kb on - strandat 2857.603 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C)
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2,856,723 + ABIE41_RS13915 0.63 +0.7
2,856,723 + ABIE41_RS13915 0.63 +1.3
2,856,723 + ABIE41_RS13915 0.63 -0.4
2,856,723 + ABIE41_RS13915 0.63 -0.1
2,856,724 - ABIE41_RS13915 0.63 -0.3
2,856,724 - ABIE41_RS13915 0.63 +1.1
2,856,724 - ABIE41_RS13915 0.63 -0.7
2,856,724 - ABIE41_RS13915 0.63 +0.6
2,856,724 - ABIE41_RS13915 0.63 -0.4
2,856,724 - ABIE41_RS13915 0.63 +0.8
2,856,724 - ABIE41_RS13915 0.63 -2.2
2,856,889 + ABIE41_RS13915 0.75 +1.2
2,856,939 + ABIE41_RS13915 0.78 -1.1
2,856,940 - ABIE41_RS13915 0.78 -0.8
2,856,940 - ABIE41_RS13915 0.78 +1.2
2,856,940 - ABIE41_RS13915 0.78 +0.2
2,857,082 - ABIE41_RS13915 0.88 -1.5
2,857,082 - ABIE41_RS13915 0.88 -0.9
2,857,547 + -0.2
2,857,548 - +0.5
2,857,598 + -0.5
2,857,598 + +0.1
2,857,598 + +0.7
2,857,603 - +1.1
2,857,603 - +0.7

Or see this region's nucleotide sequence