Strain Fitness in Bosea sp. OAE506 around ABIE41_RS08130

Experiment: L-Malic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS08125 and ABIE41_RS08130 are separated by 91 nucleotidesABIE41_RS08130 and ABIE41_RS08135 are separated by 234 nucleotides ABIE41_RS08125: ABIE41_RS08125 - ornithine cyclodeaminase family protein, at 1,680,381 to 1,681,373 _RS08125 ABIE41_RS08130: ABIE41_RS08130 - ABC transporter substrate-binding protein, at 1,681,465 to 1,682,508 _RS08130 ABIE41_RS08135: ABIE41_RS08135 - class I SAM-dependent methyltransferase, at 1,682,743 to 1,683,459 _RS08135 Position (kb) 1681 1682 1683Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1680.643 kb on + strand, within ABIE41_RS08125at 1680.643 kb on + strand, within ABIE41_RS08125at 1680.643 kb on + strand, within ABIE41_RS08125at 1680.643 kb on + strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.644 kb on - strand, within ABIE41_RS08125at 1680.882 kb on + strand, within ABIE41_RS08125at 1680.946 kb on + strand, within ABIE41_RS08125at 1680.947 kb on - strand, within ABIE41_RS08125at 1680.947 kb on - strand, within ABIE41_RS08125at 1681.162 kb on + strand, within ABIE41_RS08125at 1681.163 kb on - strand, within ABIE41_RS08125at 1681.193 kb on + strand, within ABIE41_RS08125at 1681.193 kb on + strand, within ABIE41_RS08125at 1681.193 kb on + strand, within ABIE41_RS08125at 1681.193 kb on + strand, within ABIE41_RS08125at 1681.194 kb on - strand, within ABIE41_RS08125at 1681.194 kb on - strand, within ABIE41_RS08125at 1681.647 kb on + strand, within ABIE41_RS08130at 1681.647 kb on + strand, within ABIE41_RS08130at 1681.647 kb on + strand, within ABIE41_RS08130at 1681.647 kb on + strand, within ABIE41_RS08130at 1681.647 kb on + strand, within ABIE41_RS08130at 1681.647 kb on + strand, within ABIE41_RS08130at 1681.648 kb on - strand, within ABIE41_RS08130at 1681.658 kb on + strand, within ABIE41_RS08130at 1681.658 kb on + strand, within ABIE41_RS08130at 1681.659 kb on - strand, within ABIE41_RS08130at 1681.659 kb on - strand, within ABIE41_RS08130at 1681.871 kb on + strand, within ABIE41_RS08130at 1681.872 kb on - strand, within ABIE41_RS08130at 1681.887 kb on - strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.929 kb on - strand, within ABIE41_RS08130at 1682.004 kb on + strand, within ABIE41_RS08130at 1682.004 kb on + strand, within ABIE41_RS08130at 1682.005 kb on - strand, within ABIE41_RS08130at 1682.005 kb on - strand, within ABIE41_RS08130at 1682.005 kb on - strand, within ABIE41_RS08130at 1682.174 kb on + strand, within ABIE41_RS08130at 1682.174 kb on + strand, within ABIE41_RS08130at 1682.174 kb on + strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.262 kb on - strand, within ABIE41_RS08130at 1682.262 kb on - strand, within ABIE41_RS08130at 1682.262 kb on - strand, within ABIE41_RS08130at 1682.345 kb on + strand, within ABIE41_RS08130at 1682.345 kb on + strand, within ABIE41_RS08130at 1682.346 kb on - strand, within ABIE41_RS08130at 1682.346 kb on - strand, within ABIE41_RS08130at 1682.346 kb on - strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.364 kb on - strand, within ABIE41_RS08130at 1682.369 kb on + strand, within ABIE41_RS08130at 1682.370 kb on - strand, within ABIE41_RS08130at 1682.370 kb on - strand, within ABIE41_RS08130at 1682.390 kb on + strand, within ABIE41_RS08130at 1682.606 kb on + strandat 1682.831 kb on + strand, within ABIE41_RS08135at 1682.832 kb on - strand, within ABIE41_RS08135at 1682.832 kb on - strand, within ABIE41_RS08135at 1682.945 kb on + strand, within ABIE41_RS08135at 1682.945 kb on + strand, within ABIE41_RS08135at 1682.946 kb on - strand, within ABIE41_RS08135at 1682.963 kb on + strand, within ABIE41_RS08135at 1682.963 kb on + strand, within ABIE41_RS08135at 1682.980 kb on + strand, within ABIE41_RS08135at 1682.980 kb on + strand, within ABIE41_RS08135at 1682.981 kb on - strand, within ABIE41_RS08135

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C)
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1,680,643 + ABIE41_RS08125 0.26 +0.0
1,680,643 + ABIE41_RS08125 0.26 -0.2
1,680,643 + ABIE41_RS08125 0.26 +0.7
1,680,643 + ABIE41_RS08125 0.26 -0.3
1,680,644 - ABIE41_RS08125 0.26 +1.1
1,680,644 - ABIE41_RS08125 0.26 +1.2
1,680,644 - ABIE41_RS08125 0.26 -0.3
1,680,644 - ABIE41_RS08125 0.26 +0.4
1,680,644 - ABIE41_RS08125 0.26 -1.3
1,680,644 - ABIE41_RS08125 0.26 +0.2
1,680,644 - ABIE41_RS08125 0.26 -0.1
1,680,644 - ABIE41_RS08125 0.26 -0.2
1,680,644 - ABIE41_RS08125 0.26 +0.7
1,680,882 + ABIE41_RS08125 0.50 +0.1
1,680,946 + ABIE41_RS08125 0.57 -0.8
1,680,947 - ABIE41_RS08125 0.57 -3.1
1,680,947 - ABIE41_RS08125 0.57 +0.5
1,681,162 + ABIE41_RS08125 0.79 +0.6
1,681,163 - ABIE41_RS08125 0.79 -0.6
1,681,193 + ABIE41_RS08125 0.82 +2.0
1,681,193 + ABIE41_RS08125 0.82 -0.6
1,681,193 + ABIE41_RS08125 0.82 +0.0
1,681,193 + ABIE41_RS08125 0.82 -1.8
1,681,194 - ABIE41_RS08125 0.82 -1.0
1,681,194 - ABIE41_RS08125 0.82 -0.2
1,681,647 + ABIE41_RS08130 0.17 +0.6
1,681,647 + ABIE41_RS08130 0.17 +0.7
1,681,647 + ABIE41_RS08130 0.17 +0.4
1,681,647 + ABIE41_RS08130 0.17 +1.7
1,681,647 + ABIE41_RS08130 0.17 -1.6
1,681,647 + ABIE41_RS08130 0.17 +0.0
1,681,648 - ABIE41_RS08130 0.18 +0.5
1,681,658 + ABIE41_RS08130 0.18 -0.7
1,681,658 + ABIE41_RS08130 0.18 -2.3
1,681,659 - ABIE41_RS08130 0.19 +1.6
1,681,659 - ABIE41_RS08130 0.19 +0.3
1,681,871 + ABIE41_RS08130 0.39 -0.0
1,681,872 - ABIE41_RS08130 0.39 -1.3
1,681,887 - ABIE41_RS08130 0.40 -0.2
1,681,928 + ABIE41_RS08130 0.44 -0.3
1,681,928 + ABIE41_RS08130 0.44 -1.4
1,681,928 + ABIE41_RS08130 0.44 +0.6
1,681,928 + ABIE41_RS08130 0.44 +0.8
1,681,929 - ABIE41_RS08130 0.44 -2.3
1,682,004 + ABIE41_RS08130 0.52 -0.9
1,682,004 + ABIE41_RS08130 0.52 -0.0
1,682,005 - ABIE41_RS08130 0.52 +0.5
1,682,005 - ABIE41_RS08130 0.52 +0.1
1,682,005 - ABIE41_RS08130 0.52 +0.9
1,682,174 + ABIE41_RS08130 0.68 +1.2
1,682,174 + ABIE41_RS08130 0.68 -1.1
1,682,174 + ABIE41_RS08130 0.68 -2.4
1,682,175 - ABIE41_RS08130 0.68 -0.3
1,682,175 - ABIE41_RS08130 0.68 -3.5
1,682,175 - ABIE41_RS08130 0.68 -0.1
1,682,175 - ABIE41_RS08130 0.68 +0.4
1,682,175 - ABIE41_RS08130 0.68 +1.7
1,682,183 + ABIE41_RS08130 0.69 -0.5
1,682,183 + ABIE41_RS08130 0.69 +0.7
1,682,183 + ABIE41_RS08130 0.69 -1.4
1,682,183 + ABIE41_RS08130 0.69 +0.3
1,682,183 + ABIE41_RS08130 0.69 -0.8
1,682,183 + ABIE41_RS08130 0.69 -0.0
1,682,183 + ABIE41_RS08130 0.69 +0.2
1,682,183 + ABIE41_RS08130 0.69 +1.0
1,682,184 - ABIE41_RS08130 0.69 -1.0
1,682,184 - ABIE41_RS08130 0.69 +0.2
1,682,184 - ABIE41_RS08130 0.69 +0.3
1,682,184 - ABIE41_RS08130 0.69 -0.6
1,682,262 - ABIE41_RS08130 0.76 -2.1
1,682,262 - ABIE41_RS08130 0.76 +0.6
1,682,262 - ABIE41_RS08130 0.76 +0.3
1,682,345 + ABIE41_RS08130 0.84 +0.3
1,682,345 + ABIE41_RS08130 0.84 +0.3
1,682,346 - ABIE41_RS08130 0.84 +0.4
1,682,346 - ABIE41_RS08130 0.84 +0.6
1,682,346 - ABIE41_RS08130 0.84 +1.7
1,682,363 + ABIE41_RS08130 0.86 -0.1
1,682,363 + ABIE41_RS08130 0.86 +1.9
1,682,363 + ABIE41_RS08130 0.86 -2.6
1,682,363 + ABIE41_RS08130 0.86 +0.0
1,682,364 - ABIE41_RS08130 0.86 -1.1
1,682,369 + ABIE41_RS08130 0.87 -0.1
1,682,370 - ABIE41_RS08130 0.87 -0.7
1,682,370 - ABIE41_RS08130 0.87 -0.6
1,682,390 + ABIE41_RS08130 0.89 +0.6
1,682,606 + +1.4
1,682,831 + ABIE41_RS08135 0.12 +0.6
1,682,832 - ABIE41_RS08135 0.12 +0.7
1,682,832 - ABIE41_RS08135 0.12 -2.6
1,682,945 + ABIE41_RS08135 0.28 +0.4
1,682,945 + ABIE41_RS08135 0.28 -0.6
1,682,946 - ABIE41_RS08135 0.28 +0.2
1,682,963 + ABIE41_RS08135 0.31 +1.0
1,682,963 + ABIE41_RS08135 0.31 -1.1
1,682,980 + ABIE41_RS08135 0.33 +0.2
1,682,980 + ABIE41_RS08135 0.33 +0.6
1,682,981 - ABIE41_RS08135 0.33 -0.3

Or see this region's nucleotide sequence