Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02050 and ABID97_RS02055 are separated by 136 nucleotides ABID97_RS02055 and ABID97_RS02060 are separated by 80 nucleotides
ABID97_RS02050: ABID97_RS02050 - adenylosuccinate lyase, at 411,343 to 412,723
_RS02050
ABID97_RS02055: ABID97_RS02055 - PepSY-associated TM helix domain-containing protein, at 412,860 to 413,996
_RS02055
ABID97_RS02060: ABID97_RS02060 - TonB-dependent siderophore receptor, at 414,077 to 416,209
_RS02060
Position (kb) 412
413
414 Strain fitness (log2 ratio) -2
-1
0
1 at 412.714 kb on + strand at 412.842 kb on + strand at 412.842 kb on + strand at 412.843 kb on - strand at 412.843 kb on - strand at 412.843 kb on - strand at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.168 kb on + strand, within ABID97_RS02055 at 413.168 kb on + strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.175 kb on + strand, within ABID97_RS02055 at 413.232 kb on + strand, within ABID97_RS02055 at 413.232 kb on + strand, within ABID97_RS02055 at 413.232 kb on + strand, within ABID97_RS02055 at 413.233 kb on - strand, within ABID97_RS02055 at 413.233 kb on - strand, within ABID97_RS02055 at 413.313 kb on + strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.643 kb on + strand, within ABID97_RS02055 at 413.643 kb on + strand, within ABID97_RS02055 at 413.643 kb on + strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.817 kb on + strand, within ABID97_RS02055 at 413.817 kb on + strand, within ABID97_RS02055 at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.039 kb on + strand at 414.040 kb on - strand at 414.040 kb on - strand at 414.425 kb on + strand, within ABID97_RS02060 at 414.664 kb on + strand, within ABID97_RS02060 at 414.698 kb on + strand, within ABID97_RS02060 at 414.698 kb on + strand, within ABID97_RS02060 at 414.941 kb on + strand, within ABID97_RS02060 at 414.942 kb on - strand, within ABID97_RS02060 at 414.942 kb on - strand, within ABID97_RS02060 at 414.986 kb on + strand, within ABID97_RS02060 at 414.986 kb on + strand, within ABID97_RS02060 at 414.986 kb on + strand, within ABID97_RS02060 at 414.987 kb on - strand, within ABID97_RS02060 at 414.987 kb on - strand, within ABID97_RS02060 at 414.987 kb on - strand, within ABID97_RS02060 at 414.987 kb on - strand, within ABID97_RS02060
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 412,714 + -1.8 412,842 + -0.2 412,842 + +0.2 412,843 - -1.6 412,843 - -0.7 412,843 - +0.1 413,145 + ABID97_RS02055 0.25 -0.3 413,145 + ABID97_RS02055 0.25 -0.0 413,145 + ABID97_RS02055 0.25 -0.3 413,145 + ABID97_RS02055 0.25 -0.2 413,145 + ABID97_RS02055 0.25 -1.0 413,145 + ABID97_RS02055 0.25 -0.8 413,146 - ABID97_RS02055 0.25 +0.2 413,146 - ABID97_RS02055 0.25 -0.1 413,146 - ABID97_RS02055 0.25 -0.5 413,146 - ABID97_RS02055 0.25 -0.6 413,146 - ABID97_RS02055 0.25 -0.5 413,146 - ABID97_RS02055 0.25 -0.8 413,146 - ABID97_RS02055 0.25 -0.5 413,168 + ABID97_RS02055 0.27 -0.2 413,168 + ABID97_RS02055 0.27 +0.0 413,169 - ABID97_RS02055 0.27 -0.7 413,169 - ABID97_RS02055 0.27 -1.3 413,169 - ABID97_RS02055 0.27 -1.2 413,169 - ABID97_RS02055 0.27 -0.8 413,169 - ABID97_RS02055 0.27 +0.2 413,169 - ABID97_RS02055 0.27 -1.2 413,175 + ABID97_RS02055 0.28 -2.6 413,232 + ABID97_RS02055 0.33 +0.1 413,232 + ABID97_RS02055 0.33 -0.6 413,232 + ABID97_RS02055 0.33 -1.8 413,233 - ABID97_RS02055 0.33 -1.4 413,233 - ABID97_RS02055 0.33 -1.0 413,313 + ABID97_RS02055 0.40 +0.1 413,314 - ABID97_RS02055 0.40 +1.4 413,314 - ABID97_RS02055 0.40 -0.5 413,314 - ABID97_RS02055 0.40 -0.4 413,314 - ABID97_RS02055 0.40 -0.0 413,481 + ABID97_RS02055 0.55 +0.1 413,481 + ABID97_RS02055 0.55 -1.3 413,481 + ABID97_RS02055 0.55 +0.3 413,481 + ABID97_RS02055 0.55 -0.4 413,481 + ABID97_RS02055 0.55 -0.2 413,481 + ABID97_RS02055 0.55 -1.4 413,481 + ABID97_RS02055 0.55 +0.2 413,481 + ABID97_RS02055 0.55 +0.7 413,481 + ABID97_RS02055 0.55 +0.2 413,481 + ABID97_RS02055 0.55 -0.1 413,481 + ABID97_RS02055 0.55 -1.1 413,481 + ABID97_RS02055 0.55 -0.0 413,481 + ABID97_RS02055 0.55 -0.8 413,481 + ABID97_RS02055 0.55 -1.4 413,481 + ABID97_RS02055 0.55 -0.3 413,482 - ABID97_RS02055 0.55 -0.9 413,482 - ABID97_RS02055 0.55 -0.2 413,482 - ABID97_RS02055 0.55 -0.1 413,482 - ABID97_RS02055 0.55 -0.5 413,482 - ABID97_RS02055 0.55 -0.2 413,482 - ABID97_RS02055 0.55 -0.2 413,482 - ABID97_RS02055 0.55 -0.2 413,482 - ABID97_RS02055 0.55 -0.4 413,482 - ABID97_RS02055 0.55 +1.0 413,482 - ABID97_RS02055 0.55 +0.8 413,482 - ABID97_RS02055 0.55 +0.4 413,643 + ABID97_RS02055 0.69 +0.1 413,643 + ABID97_RS02055 0.69 -0.9 413,643 + ABID97_RS02055 0.69 +0.5 413,644 - ABID97_RS02055 0.69 -0.1 413,644 - ABID97_RS02055 0.69 +0.0 413,644 - ABID97_RS02055 0.69 -0.2 413,644 - ABID97_RS02055 0.69 +0.2 413,817 + ABID97_RS02055 0.84 +0.1 413,817 + ABID97_RS02055 0.84 +0.6 414,032 - -0.2 414,032 - -1.1 414,032 - -0.6 414,032 - +0.5 414,032 - -0.2 414,032 - -0.4 414,039 + -0.7 414,040 - -1.4 414,040 - +0.8 414,425 + ABID97_RS02060 0.16 -1.2 414,664 + ABID97_RS02060 0.28 +0.2 414,698 + ABID97_RS02060 0.29 +0.8 414,698 + ABID97_RS02060 0.29 +0.1 414,941 + ABID97_RS02060 0.41 -2.3 414,942 - ABID97_RS02060 0.41 -0.2 414,942 - ABID97_RS02060 0.41 -1.8 414,986 + ABID97_RS02060 0.43 +1.5 414,986 + ABID97_RS02060 0.43 -1.0 414,986 + ABID97_RS02060 0.43 -0.1 414,987 - ABID97_RS02060 0.43 +1.1 414,987 - ABID97_RS02060 0.43 -1.7 414,987 - ABID97_RS02060 0.43 -0.8 414,987 - ABID97_RS02060 0.43 +0.5
Or see this region's nucleotide sequence