Strain Fitness in Pseudomonas sp. RS175 around PFR28_03798

Experiment: D-Glucosamine Hydrochloride carbon 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride carbon 10 mM
4,370,277	+				-0.2
4,370,277	+				-0.2
4,370,278	-				-1.1
4,370,293	-				-1.2
4,370,293	-				-1.1
4,370,293	-				+0.5
4,370,381	+		PFR28_03797	0.17	+0.7
4,370,404	+		PFR28_03797	0.20	+0.7
4,370,404	+		PFR28_03797	0.20	+0.4
4,370,405	-		PFR28_03797	0.21	+0.1
4,370,425	+		PFR28_03797	0.23	+2.5
4,370,426	-		PFR28_03797	0.24	-1.0
4,370,426	-		PFR28_03797	0.24	-0.7
4,370,426	-		PFR28_03797	0.24	+0.6
4,370,429	+		PFR28_03797	0.24	+0.1
4,370,429	+		PFR28_03797	0.24	-0.3
4,370,429	+		PFR28_03797	0.24	+0.9
4,370,429	+		PFR28_03797	0.24	+0.1
4,370,429	+		PFR28_03797	0.24	-0.2
4,370,430	-		PFR28_03797	0.24	-2.3
4,370,430	-		PFR28_03797	0.24	+0.1
4,370,451	+		PFR28_03797	0.27	+1.7
4,370,451	+		PFR28_03797	0.27	+0.7
4,370,452	-		PFR28_03797	0.27	-0.1
4,370,452	-		PFR28_03797	0.27	-0.2
4,370,452	-		PFR28_03797	0.27	-0.8
4,370,452	-		PFR28_03797	0.27	+0.0
4,370,452	-		PFR28_03797	0.27	-0.5
4,370,453	+		PFR28_03797	0.27	+0.2
4,370,453	+		PFR28_03797	0.27	-0.2
4,370,454	-		PFR28_03797	0.27	-1.3
4,370,454	-		PFR28_03797	0.27	+0.8
4,370,573	-		PFR28_03797	0.44	-0.2
4,370,591	+		PFR28_03797	0.47	+0.2
4,370,591	+		PFR28_03797	0.47	-0.0
4,370,631	-		PFR28_03797	0.52	-0.7
4,370,675	-		PFR28_03797	0.58	+0.2
4,370,676	+		PFR28_03797	0.59	+0.5
4,370,676	+		PFR28_03797	0.59	-0.7
4,370,676	+		PFR28_03797	0.59	+0.0
4,370,676	+		PFR28_03797	0.59	-0.7
4,370,676	+		PFR28_03797	0.59	+0.8
4,370,676	+		PFR28_03797	0.59	-1.5
4,370,676	+		PFR28_03797	0.59	-1.0
4,370,677	-		PFR28_03797	0.59	+0.2
4,370,677	-		PFR28_03797	0.59	+1.3
4,370,677	-		PFR28_03797	0.59	+0.5
4,370,677	-		PFR28_03797	0.59	-0.8
4,370,677	-		PFR28_03797	0.59	+0.7
4,370,677	-		PFR28_03797	0.59	-0.2
4,370,677	-		PFR28_03797	0.59	+0.1
4,370,688	-		PFR28_03797	0.60	+0.5
4,370,776	+		PFR28_03797	0.73	-0.7
4,370,776	+		PFR28_03797	0.73	-0.2
4,370,776	+		PFR28_03797	0.73	+0.5
4,370,776	+		PFR28_03797	0.73	+0.8
4,370,776	+		PFR28_03797	0.73	-1.7
4,370,776	+		PFR28_03797	0.73	-0.6
4,370,776	+		PFR28_03797	0.73	+0.4
4,370,776	+		PFR28_03797	0.73	+0.8
4,370,776	+		PFR28_03797	0.73	+0.3
4,370,776	+		PFR28_03797	0.73	-1.3
4,370,777	-		PFR28_03797	0.73	-0.1
4,370,777	-		PFR28_03797	0.73	+0.1
4,370,777	-		PFR28_03797	0.73	-0.9
4,370,777	-		PFR28_03797	0.73	-1.7
4,370,777	-		PFR28_03797	0.73	-0.1
4,370,777	-		PFR28_03797	0.73	-0.3
4,370,777	-		PFR28_03797	0.73	-0.1
4,370,777	-		PFR28_03797	0.73	+1.1
4,370,777	-		PFR28_03797	0.73	+0.2
4,370,777	-		PFR28_03797	0.73	-0.7
4,370,777	-		PFR28_03797	0.73	-0.6
4,370,787	+		PFR28_03797	0.74	+0.4
4,370,787	+		PFR28_03797	0.74	+1.3
4,370,787	+		PFR28_03797	0.74	+0.2
4,370,787	+		PFR28_03797	0.74	-0.3
4,370,787	+		PFR28_03797	0.74	+0.2
4,370,788	-		PFR28_03797	0.74	-1.6
4,370,788	-		PFR28_03797	0.74	+0.5
4,370,788	-		PFR28_03797	0.74	-0.8
4,371,009	-				-0.5
4,371,009	-				+0.4
4,371,029	-				+0.1
4,371,029	-				-0.0
4,371,029	-				-0.7
4,371,064	-				+0.3
4,371,064	-				+1.9
4,371,249	+				-0.8
4,371,249	+				-1.0
4,371,249	+				-0.1
4,371,250	-				+0.2
4,371,250	-				+0.5
4,371,250	-				+0.8
4,371,443	+		PFR28_03798	0.26	-0.8
4,371,443	+		PFR28_03798	0.26	+0.4
4,371,443	+		PFR28_03798	0.26	+0.8
4,371,443	+		PFR28_03798	0.26	+0.4
4,371,443	+		PFR28_03798	0.26	+0.5
4,371,443	+		PFR28_03798	0.26	-0.3
4,371,443	+		PFR28_03798	0.26	-0.0
4,371,444	-		PFR28_03798	0.26	+1.1
4,371,444	-		PFR28_03798	0.26	+0.7
4,371,444	-		PFR28_03798	0.26	-0.6
4,371,444	-		PFR28_03798	0.26	-0.2
4,371,444	-		PFR28_03798	0.26	-0.5
4,371,444	-		PFR28_03798	0.26	+0.8
4,371,444	-		PFR28_03798	0.26	+0.2
4,371,444	-		PFR28_03798	0.26	+0.3
4,371,444	-		PFR28_03798	0.26	-0.9
4,371,444	-		PFR28_03798	0.26	+0.1
4,371,631	-		PFR28_03798	0.42	+0.3
4,371,631	-		PFR28_03798	0.42	+0.9
4,371,631	-		PFR28_03798	0.42	+0.3
4,371,720	+		PFR28_03798	0.50	-0.0
4,371,733	-		PFR28_03798	0.52	-1.3
4,371,924	+		PFR28_03798	0.69	+0.0
4,371,924	+		PFR28_03798	0.69	+0.4
4,371,924	+		PFR28_03798	0.69	-0.6
4,371,924	+		PFR28_03798	0.69	+0.7
4,371,924	+		PFR28_03798	0.69	+0.5
4,371,925	-		PFR28_03798	0.69	+0.2
4,371,925	-		PFR28_03798	0.69	-0.2
4,371,945	+		PFR28_03798	0.70	+0.7
4,371,946	-		PFR28_03798	0.70	-1.0
4,371,946	-		PFR28_03798	0.70	+0.3
4,371,946	-		PFR28_03798	0.70	+0.4
4,372,164	+		PFR28_03798	0.90	-0.2
4,372,164	+		PFR28_03798	0.90	+0.2
4,372,164	+		PFR28_03798	0.90	-1.7
4,372,164	+		PFR28_03798	0.90	+0.8
4,372,164	+		PFR28_03798	0.90	+0.2
4,372,164	+		PFR28_03798	0.90	+1.0
4,372,165	-				-0.5
4,372,165	-				-0.0
4,372,165	-				+0.2
4,372,510	+				-0.9
4,372,546	+				+1.3
4,372,546	+				-0.6
4,372,546	+				+0.3
4,372,546	+				-0.7
4,372,546	+				-1.0
4,372,546	+				-0.6
4,372,546	+				-0.1
4,372,546	+				-0.9
4,372,547	-				-0.7
4,372,547	-				+0.1
4,372,547	-				+1.2
4,372,547	-				+1.2
4,372,549	+				-1.0
4,372,549	+				-0.7
4,372,549	+				+1.0
4,372,549	+				+0.2
4,372,549	+				-0.7
4,372,549	+				+0.0
4,372,550	-				+1.0
4,372,550	-				+0.3
4,372,550	-				+0.7
4,372,550	-				+2.3
4,372,550	-				+1.1
4,372,564	+				-0.5
4,372,564	+				+0.1
4,372,564	+				-0.3
4,372,564	+				-0.3
4,372,564	+				+0.3
4,372,564	+				-0.0
4,372,565	-				+0.2
4,372,565	-				+1.3
4,372,565	-				-0.1
4,372,565	-				-0.2
4,372,741	+		PFR28_03800	0.24	+0.2
4,372,741	+		PFR28_03800	0.24	-0.7
4,372,741	+		PFR28_03800	0.24	+0.3
4,372,741	+		PFR28_03800	0.24	+0.1
4,372,741	+		PFR28_03800	0.24	+0.9
4,372,742	-		PFR28_03800	0.24	-0.0
4,372,742	-		PFR28_03800	0.24	-0.6
4,372,742	-		PFR28_03800	0.24	-1.0
4,372,742	-		PFR28_03800	0.24	+1.3
4,372,742	-		PFR28_03800	0.24	-0.1
4,372,742	-		PFR28_03800	0.24	+0.4
4,372,777	+		PFR28_03800	0.27	-0.7
4,372,777	+		PFR28_03800	0.27	+0.3
4,372,777	+		PFR28_03800	0.27	-0.8
4,372,777	+		PFR28_03800	0.27	-0.7
4,372,777	+		PFR28_03800	0.27	-0.3
4,372,777	+		PFR28_03800	0.27	-0.1
4,372,778	-		PFR28_03800	0.27	+1.1
4,372,778	-		PFR28_03800	0.27	-0.6
4,372,778	-		PFR28_03800	0.27	+0.0
4,372,778	-		PFR28_03800	0.27	+0.3
4,372,778	-		PFR28_03800	0.27	-0.7
4,372,778	-		PFR28_03800	0.27	+1.7
4,372,778	-		PFR28_03800	0.27	+0.2
4,372,999	+		PFR28_03800	0.49	-0.3
4,372,999	+		PFR28_03800	0.49	+0.6
4,372,999	+		PFR28_03800	0.49	+0.5
4,372,999	+		PFR28_03800	0.49	+1.3
4,372,999	+		PFR28_03800	0.49	-0.3
4,373,000	-		PFR28_03800	0.49	+0.5
4,373,000	-		PFR28_03800	0.49	+0.3
4,373,000	-		PFR28_03800	0.49	+0.3
4,373,000	-		PFR28_03800	0.49	+0.8
4,373,068	+		PFR28_03800	0.56	+0.1
4,373,068	+		PFR28_03800	0.56	+0.0
4,373,068	+		PFR28_03800	0.56	+0.5
4,373,068	+		PFR28_03800	0.56	+0.0
4,373,260	+		PFR28_03800	0.75	+0.7
4,373,260	+		PFR28_03800	0.75	-0.6
4,373,260	+		PFR28_03800	0.75	-0.8
4,373,260	+		PFR28_03800	0.75	-1.6
4,373,261	-		PFR28_03800	0.75	-0.6
4,373,261	-		PFR28_03800	0.75	-0.4
4,373,261	-		PFR28_03800	0.75	-0.5
4,373,261	-		PFR28_03800	0.75	-0.0