Strain Fitness in Pseudomonas segetis P6 around MPMX49_04547

Experiment: Fluoride 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fluoride 6 mM
4,810,846	+				+0.5
4,810,846	+				+0.7
4,810,877	+				+0.7
4,810,903	+		MPMX49_04546	0.12	+0.1
4,810,903	+		MPMX49_04546	0.12	-0.3
4,810,904	-		MPMX49_04546	0.12	+0.5
4,810,904	-		MPMX49_04546	0.12	+0.1
4,810,904	-		MPMX49_04546	0.12	+0.4
4,810,906	+		MPMX49_04546	0.12	-0.2
4,810,906	+		MPMX49_04546	0.12	+0.4
4,810,907	-		MPMX49_04546	0.13	+0.6
4,810,907	-		MPMX49_04546	0.13	+0.2
4,810,924	-		MPMX49_04546	0.14	-0.0
4,811,027	+		MPMX49_04546	0.26	-1.4
4,811,226	+		MPMX49_04546	0.47	+0.4
4,811,227	-		MPMX49_04546	0.47	-0.7
4,811,313	-		MPMX49_04546	0.57	+0.2
4,811,361	+		MPMX49_04546	0.62	-0.2
4,811,557	-		MPMX49_04546	0.83	+0.6
4,811,572	+		MPMX49_04546	0.85	+0.2
4,811,687	-				+0.2
4,811,741	+				-0.6
4,811,778	-				-1.0
4,811,778	-				+0.7
4,811,793	-				-0.9
4,811,812	+				+0.3
4,811,812	+				-0.9
4,811,812	+				-0.3
4,811,812	+				-0.2
4,811,812	+				+0.7
4,811,813	-				-1.4
4,811,813	-				+0.1
4,811,813	-				-2.9
4,811,813	-				-1.4
4,811,828	+				-0.0
4,811,882	-				-0.7
4,811,925	-				-0.2
4,811,928	-				+1.1
4,812,099	+		MPMX49_04547	0.22	+0.3
4,812,132	-		MPMX49_04547	0.24	-1.3
4,812,327	-		MPMX49_04547	0.39	-0.8
4,812,357	+		MPMX49_04547	0.41	+0.3
4,812,358	-		MPMX49_04547	0.41	-0.2
4,812,435	-		MPMX49_04547	0.47	-1.7
4,812,575	-		MPMX49_04547	0.57	-0.3
4,812,575	-		MPMX49_04547	0.57	-0.3
4,812,575	-		MPMX49_04547	0.57	-1.0
4,812,581	-		MPMX49_04547	0.58	+0.1
4,812,654	+		MPMX49_04547	0.63	-1.3
4,812,655	-		MPMX49_04547	0.63	-0.1
4,812,655	-		MPMX49_04547	0.63	-0.2
4,812,655	-		MPMX49_04547	0.63	+0.1
4,812,692	+		MPMX49_04547	0.66	-0.4
4,812,693	-		MPMX49_04547	0.66	-0.3
4,812,702	+		MPMX49_04547	0.67	-0.3
4,812,762	+		MPMX49_04547	0.71	-2.1
4,812,762	+		MPMX49_04547	0.71	+0.2
4,812,762	+		MPMX49_04547	0.71	-0.1
4,812,763	-		MPMX49_04547	0.71	-0.1
4,812,763	-		MPMX49_04547	0.71	-0.6
4,812,763	-		MPMX49_04547	0.71	+0.7
4,812,763	-		MPMX49_04547	0.71	-0.1
4,812,763	-		MPMX49_04547	0.71	+0.3
4,812,763	-		MPMX49_04547	0.71	+0.1
4,812,763	-		MPMX49_04547	0.71	-1.9
4,812,897	+		MPMX49_04547	0.82	-0.7
4,812,898	-		MPMX49_04547	0.82	-1.4
4,812,898	-		MPMX49_04547	0.82	-0.1
4,812,939	+		MPMX49_04547	0.85	-1.3
4,812,939	+		MPMX49_04547	0.85	-1.7
4,812,939	+		MPMX49_04547	0.85	-0.3
4,812,939	+		MPMX49_04547	0.85	-0.9
4,812,940	-		MPMX49_04547	0.85	-0.6
4,812,940	-		MPMX49_04547	0.85	+0.4
4,812,945	+		MPMX49_04547	0.85	-0.1
4,812,946	-		MPMX49_04547	0.85	+0.1
4,813,077	+				-0.9
4,813,077	+				-1.2
4,813,077	+				-0.6
4,813,077	+				+0.4
4,813,077	+				-0.4
4,813,077	+				-1.3
4,813,077	+				-0.7
4,813,078	-				+0.5
4,813,127	+				+0.1
4,813,128	-				+0.1
4,813,185	+				-1.9
4,813,186	-				-0.8
4,813,232	+				+0.2
4,813,232	+				+0.4
4,813,232	+				+0.1
4,813,232	+				-0.7
4,813,232	+				+0.7
4,813,232	+				-1.7
4,813,232	+				-0.1
4,813,232	+				-0.2
4,813,232	+				+0.1
4,813,232	+				-0.4
4,813,232	+				+0.8
4,813,232	+				-0.4
4,813,232	+				+0.3
4,813,232	+				-0.2
4,813,233	-				-0.4
4,813,233	-				-0.2
4,813,233	-				+0.9
4,813,233	-				-0.6
4,813,233	-				-0.1
4,813,233	-				-0.5
4,813,233	-				+0.5
4,813,233	-				+0.3
4,813,233	-				+0.5
4,813,316	-		MPMX49_04548	0.12	+0.0
4,813,349	+		MPMX49_04548	0.14	+0.0
4,813,349	+		MPMX49_04548	0.14	-0.2
4,813,349	+		MPMX49_04548	0.14	+0.2
4,813,349	+		MPMX49_04548	0.14	+0.0
4,813,350	-		MPMX49_04548	0.14	-0.4
4,813,350	-		MPMX49_04548	0.14	+0.4
4,813,350	-		MPMX49_04548	0.14	+0.6
4,813,350	-		MPMX49_04548	0.14	-0.4
4,813,350	-		MPMX49_04548	0.14	+1.1
4,813,573	+		MPMX49_04548	0.30	-0.5
4,813,574	-		MPMX49_04548	0.30	+0.1
4,813,574	-		MPMX49_04548	0.30	-0.4
4,813,678	+		MPMX49_04548	0.38	+0.4
4,813,678	+		MPMX49_04548	0.38	-1.2
4,813,678	+		MPMX49_04548	0.38	+0.1
4,813,804	+		MPMX49_04548	0.47	-1.2
4,813,805	-		MPMX49_04548	0.47	+2.7
4,813,806	+		MPMX49_04548	0.47	-0.3
4,813,814	-		MPMX49_04548	0.48	+1.3
4,813,814	-		MPMX49_04548	0.48	+0.6
4,813,881	-		MPMX49_04548	0.53	+0.2
4,813,897	+		MPMX49_04548	0.54	-0.4
4,813,897	+		MPMX49_04548	0.54	-1.0
4,813,898	-		MPMX49_04548	0.54	-0.6
4,813,916	+		MPMX49_04548	0.55	-0.3
4,813,916	+		MPMX49_04548	0.55	+0.1
4,813,917	-		MPMX49_04548	0.55	+0.4
4,813,917	-		MPMX49_04548	0.55	+0.1
4,813,996	+		MPMX49_04548	0.61	+0.6
4,813,996	+		MPMX49_04548	0.61	+0.5
4,813,996	+		MPMX49_04548	0.61	-0.0
4,813,996	+		MPMX49_04548	0.61	+1.3
4,813,997	-		MPMX49_04548	0.61	-0.7
4,813,997	-		MPMX49_04548	0.61	-0.1
4,813,997	-		MPMX49_04548	0.61	+0.4
4,813,997	-		MPMX49_04548	0.61	+0.3