Experiment: Fluoride 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX49_00150 and MPMX49_00151 are separated by 585 nucleotides MPMX49_00151 and MPMX49_00152 are separated by 32 nucleotides MPMX49_00152 and MPMX49_00153 are separated by 133 nucleotides
MPMX49_00150: MPMX49_00150 - 47 kDa outer membrane protein, at 162,918 to 164,192
_00150
MPMX49_00151: MPMX49_00151 - hypothetical protein, at 164,778 to 166,064
_00151
MPMX49_00152: MPMX49_00152 - hypothetical protein, at 166,097 to 166,633
_00152
MPMX49_00153: MPMX49_00153 - hypothetical protein, at 166,767 to 167,012
_00153
Position (kb) 164
165
166
167 Strain fitness (log2 ratio) -2
-1
0
1
2 at 163.807 kb on + strand, within MPMX49_00150 at 163.808 kb on - strand, within MPMX49_00150 at 163.808 kb on - strand, within MPMX49_00150 at 163.866 kb on + strand, within MPMX49_00150 at 163.867 kb on - strand, within MPMX49_00150 at 163.867 kb on - strand, within MPMX49_00150 at 163.904 kb on - strand, within MPMX49_00150 at 163.904 kb on - strand, within MPMX49_00150 at 163.904 kb on - strand, within MPMX49_00150 at 163.943 kb on + strand, within MPMX49_00150 at 164.116 kb on + strand at 164.117 kb on - strand at 164.168 kb on + strand at 164.168 kb on + strand at 164.169 kb on - strand at 164.169 kb on - strand at 164.208 kb on + strand at 164.208 kb on + strand at 164.208 kb on + strand at 164.208 kb on + strand at 164.209 kb on - strand at 164.209 kb on - strand at 164.209 kb on - strand at 164.209 kb on - strand at 164.209 kb on - strand at 164.209 kb on - strand at 164.214 kb on + strand at 164.214 kb on + strand at 164.214 kb on + strand at 164.215 kb on - strand at 164.215 kb on - strand at 164.215 kb on - strand at 164.216 kb on + strand at 164.217 kb on - strand at 164.224 kb on + strand at 164.224 kb on + strand at 164.224 kb on + strand at 164.224 kb on + strand at 164.224 kb on + strand at 164.224 kb on + strand at 164.225 kb on - strand at 164.225 kb on - strand at 164.244 kb on - strand at 164.256 kb on - strand at 164.259 kb on - strand at 164.259 kb on - strand at 164.436 kb on + strand at 164.436 kb on + strand at 164.437 kb on - strand at 164.437 kb on - strand at 164.461 kb on + strand at 164.510 kb on + strand at 164.516 kb on - strand at 164.516 kb on - strand at 164.597 kb on + strand at 164.597 kb on + strand at 164.621 kb on - strand at 164.639 kb on + strand at 164.639 kb on + strand at 164.663 kb on + strand at 164.664 kb on - strand at 164.667 kb on + strand at 164.667 kb on + strand at 164.667 kb on + strand at 164.667 kb on + strand at 164.667 kb on + strand at 164.668 kb on - strand at 164.668 kb on - strand at 164.668 kb on - strand at 164.668 kb on - strand at 164.669 kb on + strand at 164.669 kb on + strand at 164.669 kb on + strand at 164.669 kb on + strand at 164.669 kb on + strand at 164.669 kb on + strand at 164.669 kb on + strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.670 kb on - strand at 164.685 kb on + strand at 164.685 kb on + strand at 164.686 kb on - strand at 164.686 kb on - strand at 164.690 kb on - strand at 164.730 kb on + strand at 164.803 kb on - strand at 164.956 kb on + strand, within MPMX49_00151 at 164.957 kb on - strand, within MPMX49_00151 at 164.969 kb on + strand, within MPMX49_00151 at 164.970 kb on - strand, within MPMX49_00151 at 165.146 kb on - strand, within MPMX49_00151 at 165.170 kb on + strand, within MPMX49_00151 at 165.171 kb on - strand, within MPMX49_00151 at 165.322 kb on + strand, within MPMX49_00151 at 165.323 kb on - strand, within MPMX49_00151 at 165.323 kb on - strand, within MPMX49_00151 at 165.323 kb on - strand, within MPMX49_00151 at 165.506 kb on - strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.538 kb on + strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.539 kb on - strand, within MPMX49_00151 at 165.540 kb on + strand, within MPMX49_00151 at 165.540 kb on + strand, within MPMX49_00151 at 165.541 kb on - strand, within MPMX49_00151 at 165.648 kb on - strand, within MPMX49_00151 at 165.648 kb on - strand, within MPMX49_00151 at 165.726 kb on - strand, within MPMX49_00151 at 165.726 kb on - strand, within MPMX49_00151 at 165.728 kb on + strand, within MPMX49_00151 at 165.728 kb on + strand, within MPMX49_00151 at 165.729 kb on - strand, within MPMX49_00151 at 165.729 kb on - strand, within MPMX49_00151 at 165.828 kb on + strand, within MPMX49_00151 at 165.829 kb on - strand, within MPMX49_00151 at 165.880 kb on + strand, within MPMX49_00151 at 165.940 kb on + strand at 166.020 kb on + strand at 166.020 kb on + strand at 166.020 kb on + strand at 166.020 kb on + strand at 166.020 kb on + strand at 166.020 kb on + strand at 166.020 kb on + strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.021 kb on - strand at 166.062 kb on + strand at 166.062 kb on + strand at 166.147 kb on - strand at 166.215 kb on + strand, within MPMX49_00152 at 166.215 kb on + strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.216 kb on - strand, within MPMX49_00152 at 166.219 kb on + strand, within MPMX49_00152 at 166.220 kb on - strand, within MPMX49_00152 at 166.220 kb on - strand, within MPMX49_00152 at 166.220 kb on - strand, within MPMX49_00152 at 166.234 kb on + strand, within MPMX49_00152 at 166.235 kb on - strand, within MPMX49_00152 at 166.419 kb on + strand, within MPMX49_00152 at 166.470 kb on + strand, within MPMX49_00152 at 166.471 kb on - strand, within MPMX49_00152 at 166.471 kb on - strand, within MPMX49_00152 at 166.471 kb on - strand, within MPMX49_00152 at 166.477 kb on + strand, within MPMX49_00152 at 166.477 kb on + strand, within MPMX49_00152 at 166.477 kb on + strand, within MPMX49_00152 at 166.477 kb on + strand, within MPMX49_00152 at 166.477 kb on + strand, within MPMX49_00152 at 166.478 kb on - strand, within MPMX49_00152 at 166.478 kb on - strand, within MPMX49_00152 at 166.478 kb on - strand, within MPMX49_00152 at 166.478 kb on - strand, within MPMX49_00152 at 166.478 kb on - strand, within MPMX49_00152 at 166.620 kb on - strand at 166.720 kb on - strand at 166.720 kb on - strand at 166.733 kb on + strand at 166.733 kb on + strand at 166.733 kb on + strand at 166.734 kb on - strand at 166.790 kb on - strand at 166.794 kb on - strand, within MPMX49_00153 at 166.879 kb on + strand, within MPMX49_00153 at 166.880 kb on - strand, within MPMX49_00153 at 166.880 kb on - strand, within MPMX49_00153 at 166.880 kb on - strand, within MPMX49_00153 at 166.880 kb on - strand, within MPMX49_00153 at 166.880 kb on - strand, within MPMX49_00153 at 166.883 kb on + strand, within MPMX49_00153 at 166.883 kb on + strand, within MPMX49_00153 at 166.974 kb on + strand, within MPMX49_00153 at 166.974 kb on + strand, within MPMX49_00153 at 166.974 kb on + strand, within MPMX49_00153 at 166.974 kb on + strand, within MPMX49_00153 at 166.975 kb on - strand, within MPMX49_00153 at 166.994 kb on + strand at 166.994 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fluoride 6 mM remove 163,807 + MPMX49_00150 0.70 +1.3 163,808 - MPMX49_00150 0.70 -0.1 163,808 - MPMX49_00150 0.70 -0.2 163,866 + MPMX49_00150 0.74 -0.8 163,867 - MPMX49_00150 0.74 -0.2 163,867 - MPMX49_00150 0.74 +0.0 163,904 - MPMX49_00150 0.77 -0.1 163,904 - MPMX49_00150 0.77 +0.3 163,904 - MPMX49_00150 0.77 +0.4 163,943 + MPMX49_00150 0.80 -0.2 164,116 + -1.5 164,117 - -0.6 164,168 + +0.2 164,168 + +0.9 164,169 - +0.1 164,169 - +0.3 164,208 + +0.8 164,208 + +0.2 164,208 + -1.1 164,208 + -0.6 164,209 - +0.2 164,209 - +0.1 164,209 - -0.1 164,209 - -0.2 164,209 - +0.0 164,209 - -1.2 164,214 + +0.1 164,214 + -0.6 164,214 + -0.4 164,215 - -0.3 164,215 - -0.1 164,215 - +0.7 164,216 + +0.8 164,217 - +1.5 164,224 + +0.1 164,224 + -0.6 164,224 + -0.3 164,224 + +0.5 164,224 + +1.1 164,224 + +0.1 164,225 - -0.5 164,225 - -0.3 164,244 - +0.4 164,256 - -0.1 164,259 - +0.2 164,259 - +0.7 164,436 + -0.0 164,436 + +0.1 164,437 - -0.2 164,437 - -0.2 164,461 + -0.9 164,510 + +0.6 164,516 - -0.4 164,516 - +0.2 164,597 + +0.3 164,597 + +0.3 164,621 - +0.0 164,639 + -0.7 164,639 + +0.1 164,663 + +0.3 164,664 - -1.4 164,667 + -0.5 164,667 + -0.3 164,667 + -0.3 164,667 + -0.2 164,667 + +2.7 164,668 - -0.7 164,668 - +0.5 164,668 - +1.1 164,668 - +1.0 164,669 + -0.5 164,669 + +0.1 164,669 + +0.3 164,669 + +0.3 164,669 + +0.1 164,669 + -0.7 164,669 + +0.2 164,670 - -0.1 164,670 - +0.1 164,670 - -0.1 164,670 - -0.1 164,670 - -0.9 164,670 - +0.3 164,670 - +0.3 164,670 - -0.6 164,685 + -0.7 164,685 + -1.2 164,686 - +0.6 164,686 - -0.4 164,690 - -0.0 164,730 + -0.9 164,803 - -0.2 164,956 + MPMX49_00151 0.14 +0.1 164,957 - MPMX49_00151 0.14 +0.2 164,969 + MPMX49_00151 0.15 +0.7 164,970 - MPMX49_00151 0.15 -0.0 165,146 - MPMX49_00151 0.29 +0.6 165,170 + MPMX49_00151 0.30 +0.7 165,171 - MPMX49_00151 0.31 +2.1 165,322 + MPMX49_00151 0.42 -0.2 165,323 - MPMX49_00151 0.42 -0.0 165,323 - MPMX49_00151 0.42 -0.6 165,323 - MPMX49_00151 0.42 +0.2 165,506 - MPMX49_00151 0.57 -1.2 165,538 + MPMX49_00151 0.59 -0.7 165,538 + MPMX49_00151 0.59 +0.7 165,538 + MPMX49_00151 0.59 +0.6 165,538 + MPMX49_00151 0.59 +0.2 165,538 + MPMX49_00151 0.59 -0.6 165,538 + MPMX49_00151 0.59 -0.6 165,538 + MPMX49_00151 0.59 -0.1 165,538 + MPMX49_00151 0.59 +0.7 165,539 - MPMX49_00151 0.59 +0.7 165,539 - MPMX49_00151 0.59 -2.2 165,539 - MPMX49_00151 0.59 +0.4 165,539 - MPMX49_00151 0.59 -0.8 165,539 - MPMX49_00151 0.59 +0.2 165,539 - MPMX49_00151 0.59 +0.3 165,539 - MPMX49_00151 0.59 -0.2 165,539 - MPMX49_00151 0.59 +0.4 165,539 - MPMX49_00151 0.59 -1.2 165,539 - MPMX49_00151 0.59 -0.4 165,539 - MPMX49_00151 0.59 +0.3 165,539 - MPMX49_00151 0.59 -1.4 165,539 - MPMX49_00151 0.59 -0.8 165,539 - MPMX49_00151 0.59 -0.2 165,539 - MPMX49_00151 0.59 -1.9 165,539 - MPMX49_00151 0.59 -2.4 165,539 - MPMX49_00151 0.59 +1.2 165,539 - MPMX49_00151 0.59 +0.3 165,539 - MPMX49_00151 0.59 -0.6 165,540 + MPMX49_00151 0.59 +0.1 165,540 + MPMX49_00151 0.59 -0.3 165,541 - MPMX49_00151 0.59 +0.0 165,648 - MPMX49_00151 0.68 -0.1 165,648 - MPMX49_00151 0.68 -0.5 165,726 - MPMX49_00151 0.74 +0.1 165,726 - MPMX49_00151 0.74 +0.0 165,728 + MPMX49_00151 0.74 -0.3 165,728 + MPMX49_00151 0.74 +2.4 165,729 - MPMX49_00151 0.74 +0.1 165,729 - MPMX49_00151 0.74 +0.1 165,828 + MPMX49_00151 0.82 +1.3 165,829 - MPMX49_00151 0.82 +0.0 165,880 + MPMX49_00151 0.86 +0.2 165,940 + +0.3 166,020 + -0.6 166,020 + +0.2 166,020 + -0.2 166,020 + +0.1 166,020 + -0.2 166,020 + +0.4 166,020 + -0.9 166,021 - +0.5 166,021 - -0.1 166,021 - -0.6 166,021 - +0.0 166,021 - -0.5 166,021 - -0.7 166,021 - +0.4 166,021 - -0.7 166,021 - +1.0 166,062 + +0.4 166,062 + -0.7 166,147 - +0.1 166,215 + MPMX49_00152 0.22 -0.4 166,215 + MPMX49_00152 0.22 -1.0 166,216 - MPMX49_00152 0.22 +0.9 166,216 - MPMX49_00152 0.22 +2.1 166,216 - MPMX49_00152 0.22 -2.1 166,216 - MPMX49_00152 0.22 -0.3 166,216 - MPMX49_00152 0.22 +0.4 166,216 - MPMX49_00152 0.22 -0.2 166,216 - MPMX49_00152 0.22 -0.2 166,219 + MPMX49_00152 0.23 +2.4 166,220 - MPMX49_00152 0.23 -0.0 166,220 - MPMX49_00152 0.23 +0.3 166,220 - MPMX49_00152 0.23 -0.4 166,234 + MPMX49_00152 0.26 +0.0 166,235 - MPMX49_00152 0.26 -1.1 166,419 + MPMX49_00152 0.60 +0.8 166,470 + MPMX49_00152 0.69 +0.3 166,471 - MPMX49_00152 0.70 +0.5 166,471 - MPMX49_00152 0.70 -0.3 166,471 - MPMX49_00152 0.70 -0.5 166,477 + MPMX49_00152 0.71 -0.6 166,477 + MPMX49_00152 0.71 +0.5 166,477 + MPMX49_00152 0.71 -1.7 166,477 + MPMX49_00152 0.71 -0.7 166,477 + MPMX49_00152 0.71 +0.1 166,478 - MPMX49_00152 0.71 +0.6 166,478 - MPMX49_00152 0.71 -0.5 166,478 - MPMX49_00152 0.71 -0.3 166,478 - MPMX49_00152 0.71 +0.0 166,478 - MPMX49_00152 0.71 -0.0 166,620 - +0.6 166,720 - -1.0 166,720 - -1.5 166,733 + -1.2 166,733 + +0.4 166,733 + +0.2 166,734 - -0.2 166,790 - -0.1 166,794 - MPMX49_00153 0.11 -0.8 166,879 + MPMX49_00153 0.46 -0.4 166,880 - MPMX49_00153 0.46 +0.1 166,880 - MPMX49_00153 0.46 -0.9 166,880 - MPMX49_00153 0.46 +0.0 166,880 - MPMX49_00153 0.46 +0.5 166,880 - MPMX49_00153 0.46 -0.9 166,883 + MPMX49_00153 0.47 -0.1 166,883 + MPMX49_00153 0.47 -0.2 166,974 + MPMX49_00153 0.84 -0.2 166,974 + MPMX49_00153 0.84 +0.7 166,974 + MPMX49_00153 0.84 +0.3 166,974 + MPMX49_00153 0.84 +0.5 166,975 - MPMX49_00153 0.85 -0.9 166,994 + -0.7 166,994 + -0.2
Or see this region's nucleotide sequence