Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16915 and IAI46_16920 are separated by 356 nucleotides IAI46_16920 and IAI46_16925 are separated by 113 nucleotides
IAI46_16915: IAI46_16915 - starvation-sensing protein RspA, at 3,546,388 to 3,547,641
_16915
IAI46_16920: IAI46_16920 - SDR family oxidoreductase, at 3,547,998 to 3,548,765
_16920
IAI46_16925: IAI46_16925 - MFS transporter, at 3,548,879 to 3,550,243
_16925
Position (kb)
3547
3548
3549 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3547.046 kb on + strand, within IAI46_16915 at 3547.065 kb on - strand, within IAI46_16915 at 3547.065 kb on - strand, within IAI46_16915 at 3547.077 kb on + strand, within IAI46_16915 at 3547.169 kb on + strand, within IAI46_16915 at 3547.170 kb on - strand, within IAI46_16915 at 3547.189 kb on + strand, within IAI46_16915 at 3547.189 kb on + strand, within IAI46_16915 at 3547.190 kb on - strand, within IAI46_16915 at 3547.194 kb on - strand, within IAI46_16915 at 3547.194 kb on - strand, within IAI46_16915 at 3547.194 kb on - strand, within IAI46_16915 at 3547.234 kb on + strand, within IAI46_16915 at 3547.234 kb on + strand, within IAI46_16915 at 3547.268 kb on + strand, within IAI46_16915 at 3547.311 kb on - strand, within IAI46_16915 at 3547.312 kb on + strand, within IAI46_16915 at 3547.313 kb on - strand, within IAI46_16915 at 3547.333 kb on - strand, within IAI46_16915 at 3547.432 kb on - strand, within IAI46_16915 at 3547.476 kb on + strand, within IAI46_16915 at 3547.477 kb on - strand, within IAI46_16915 at 3547.477 kb on - strand, within IAI46_16915 at 3547.477 kb on - strand, within IAI46_16915 at 3547.478 kb on + strand, within IAI46_16915 at 3547.478 kb on + strand, within IAI46_16915 at 3547.541 kb on + strand at 3547.541 kb on + strand at 3547.541 kb on + strand at 3547.542 kb on - strand at 3547.557 kb on + strand at 3547.570 kb on - strand at 3547.630 kb on + strand at 3547.630 kb on + strand at 3547.630 kb on + strand at 3547.630 kb on + strand at 3547.631 kb on - strand at 3547.631 kb on - strand at 3547.644 kb on + strand at 3547.695 kb on + strand at 3547.958 kb on + strand at 3547.959 kb on - strand at 3547.997 kb on + strand at 3547.997 kb on + strand at 3547.998 kb on - strand at 3547.998 kb on - strand at 3548.003 kb on + strand at 3548.295 kb on - strand, within IAI46_16920 at 3548.364 kb on - strand, within IAI46_16920 at 3548.364 kb on - strand, within IAI46_16920 at 3548.569 kb on - strand, within IAI46_16920 at 3548.569 kb on - strand, within IAI46_16920 at 3548.688 kb on + strand, within IAI46_16920 at 3548.712 kb on + strand at 3548.713 kb on - strand at 3548.729 kb on + strand at 3548.836 kb on - strand at 3548.905 kb on + strand at 3548.938 kb on + strand at 3548.938 kb on + strand at 3548.938 kb on + strand at 3548.939 kb on - strand at 3548.939 kb on - strand at 3548.942 kb on + strand at 3548.943 kb on - strand at 3548.944 kb on + strand at 3549.021 kb on + strand, within IAI46_16925 at 3549.021 kb on + strand, within IAI46_16925 at 3549.037 kb on + strand, within IAI46_16925 at 3549.037 kb on + strand, within IAI46_16925 at 3549.037 kb on + strand, within IAI46_16925 at 3549.074 kb on + strand, within IAI46_16925 at 3549.139 kb on + strand, within IAI46_16925 at 3549.139 kb on + strand, within IAI46_16925 at 3549.318 kb on - strand, within IAI46_16925 at 3549.318 kb on - strand, within IAI46_16925 at 3549.332 kb on + strand, within IAI46_16925 at 3549.334 kb on + strand, within IAI46_16925 at 3549.335 kb on - strand, within IAI46_16925 at 3549.335 kb on - strand, within IAI46_16925 at 3549.336 kb on + strand, within IAI46_16925 at 3549.336 kb on + strand, within IAI46_16925 at 3549.336 kb on + strand, within IAI46_16925 at 3549.336 kb on + strand, within IAI46_16925 at 3549.336 kb on + strand, within IAI46_16925 at 3549.337 kb on - strand, within IAI46_16925 at 3549.337 kb on - strand, within IAI46_16925 at 3549.404 kb on + strand, within IAI46_16925 at 3549.405 kb on - strand, within IAI46_16925 at 3549.405 kb on - strand, within IAI46_16925 at 3549.424 kb on + strand, within IAI46_16925 at 3549.456 kb on - strand, within IAI46_16925 at 3549.478 kb on + strand, within IAI46_16925 at 3549.479 kb on - strand, within IAI46_16925 at 3549.479 kb on - strand, within IAI46_16925 at 3549.479 kb on - strand, within IAI46_16925 at 3549.504 kb on - strand, within IAI46_16925 at 3549.647 kb on + strand, within IAI46_16925 at 3549.648 kb on - strand, within IAI46_16925 at 3549.668 kb on - strand, within IAI46_16925 at 3549.675 kb on - strand, within IAI46_16925 at 3549.675 kb on - strand, within IAI46_16925 at 3549.717 kb on + strand, within IAI46_16925 at 3549.718 kb on - strand, within IAI46_16925 at 3549.718 kb on - strand, within IAI46_16925
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,547,046 + IAI46_16915 0.52 -0.3 3,547,065 - IAI46_16915 0.54 +0.7 3,547,065 - IAI46_16915 0.54 -0.3 3,547,077 + IAI46_16915 0.55 -0.3 3,547,169 + IAI46_16915 0.62 +1.2 3,547,170 - IAI46_16915 0.62 +1.1 3,547,189 + IAI46_16915 0.64 +1.4 3,547,189 + IAI46_16915 0.64 +1.0 3,547,190 - IAI46_16915 0.64 +0.7 3,547,194 - IAI46_16915 0.64 -0.4 3,547,194 - IAI46_16915 0.64 +0.6 3,547,194 - IAI46_16915 0.64 -0.7 3,547,234 + IAI46_16915 0.67 +0.5 3,547,234 + IAI46_16915 0.67 -1.2 3,547,268 + IAI46_16915 0.70 +0.7 3,547,311 - IAI46_16915 0.74 +0.4 3,547,312 + IAI46_16915 0.74 -2.5 3,547,313 - IAI46_16915 0.74 +0.3 3,547,333 - IAI46_16915 0.75 +0.5 3,547,432 - IAI46_16915 0.83 -0.2 3,547,476 + IAI46_16915 0.87 +0.8 3,547,477 - IAI46_16915 0.87 +1.1 3,547,477 - IAI46_16915 0.87 +0.1 3,547,477 - IAI46_16915 0.87 +0.5 3,547,478 + IAI46_16915 0.87 +0.9 3,547,478 + IAI46_16915 0.87 +0.6 3,547,541 + +0.4 3,547,541 + +0.8 3,547,541 + +0.1 3,547,542 - -0.7 3,547,557 + -1.0 3,547,570 - +1.1 3,547,630 + -0.8 3,547,630 + +0.2 3,547,630 + -0.2 3,547,630 + -0.0 3,547,631 - +0.7 3,547,631 - +1.5 3,547,644 + +0.1 3,547,695 + -0.8 3,547,958 + -2.1 3,547,959 - -0.3 3,547,997 + +0.7 3,547,997 + -0.2 3,547,998 - +1.8 3,547,998 - +0.0 3,548,003 + +0.4 3,548,295 - IAI46_16920 0.39 +0.7 3,548,364 - IAI46_16920 0.48 +0.4 3,548,364 - IAI46_16920 0.48 -0.2 3,548,569 - IAI46_16920 0.74 +0.1 3,548,569 - IAI46_16920 0.74 +0.8 3,548,688 + IAI46_16920 0.90 -0.0 3,548,712 + +0.3 3,548,713 - +0.1 3,548,729 + +0.7 3,548,836 - -0.5 3,548,905 + +0.4 3,548,938 + -0.3 3,548,938 + +0.3 3,548,938 + +0.3 3,548,939 - +0.7 3,548,939 - -0.8 3,548,942 + -1.1 3,548,943 - -0.1 3,548,944 + +0.9 3,549,021 + IAI46_16925 0.10 +0.5 3,549,021 + IAI46_16925 0.10 -0.3 3,549,037 + IAI46_16925 0.12 -0.1 3,549,037 + IAI46_16925 0.12 -0.2 3,549,037 + IAI46_16925 0.12 +0.3 3,549,074 + IAI46_16925 0.14 +0.6 3,549,139 + IAI46_16925 0.19 +0.1 3,549,139 + IAI46_16925 0.19 +0.9 3,549,318 - IAI46_16925 0.32 +0.4 3,549,318 - IAI46_16925 0.32 +0.1 3,549,332 + IAI46_16925 0.33 -0.9 3,549,334 + IAI46_16925 0.33 +1.1 3,549,335 - IAI46_16925 0.33 +0.2 3,549,335 - IAI46_16925 0.33 -0.7 3,549,336 + IAI46_16925 0.33 +0.6 3,549,336 + IAI46_16925 0.33 +1.4 3,549,336 + IAI46_16925 0.33 -0.1 3,549,336 + IAI46_16925 0.33 +0.3 3,549,336 + IAI46_16925 0.33 +0.2 3,549,337 - IAI46_16925 0.34 +0.6 3,549,337 - IAI46_16925 0.34 +0.8 3,549,404 + IAI46_16925 0.38 +0.7 3,549,405 - IAI46_16925 0.39 -0.3 3,549,405 - IAI46_16925 0.39 +0.5 3,549,424 + IAI46_16925 0.40 +0.2 3,549,456 - IAI46_16925 0.42 -1.0 3,549,478 + IAI46_16925 0.44 -2.7 3,549,479 - IAI46_16925 0.44 -0.2 3,549,479 - IAI46_16925 0.44 -0.3 3,549,479 - IAI46_16925 0.44 -0.2 3,549,504 - IAI46_16925 0.46 +2.4 3,549,647 + IAI46_16925 0.56 +0.6 3,549,648 - IAI46_16925 0.56 -0.3 3,549,668 - IAI46_16925 0.58 +1.8 3,549,675 - IAI46_16925 0.58 +1.8 3,549,675 - IAI46_16925 0.58 -0.1 3,549,717 + IAI46_16925 0.61 +0.4 3,549,718 - IAI46_16925 0.61 -0.6 3,549,718 - IAI46_16925 0.61 +0.1
Or see this region's nucleotide sequence