Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15465 and IAI46_15470 overlap by 4 nucleotides IAI46_15470 and IAI46_15475 are separated by 441 nucleotides
IAI46_15465: IAI46_15465 - NAD(P)-dependent oxidoreductase, at 3,236,763 to 3,237,779
_15465
IAI46_15470: IAI46_15470 - ketoacyl-ACP synthase III, at 3,237,776 to 3,238,783
_15470
IAI46_15475: IAI46_15475 - tyrosine-type recombinase/integrase, at 3,239,225 to 3,239,836
_15475
Position (kb)
3237
3238
3239 Strain fitness (log2 ratio)
-2
-1
0
1 at 3236.893 kb on + strand, within IAI46_15465 at 3236.894 kb on - strand, within IAI46_15465 at 3236.909 kb on + strand, within IAI46_15465 at 3236.909 kb on + strand, within IAI46_15465 at 3236.909 kb on + strand, within IAI46_15465 at 3236.983 kb on - strand, within IAI46_15465 at 3237.011 kb on - strand, within IAI46_15465 at 3237.011 kb on - strand, within IAI46_15465 at 3237.011 kb on - strand, within IAI46_15465 at 3237.292 kb on + strand, within IAI46_15465 at 3237.293 kb on - strand, within IAI46_15465 at 3237.329 kb on + strand, within IAI46_15465 at 3237.329 kb on + strand, within IAI46_15465 at 3237.330 kb on - strand, within IAI46_15465 at 3237.361 kb on + strand, within IAI46_15465 at 3237.509 kb on + strand, within IAI46_15465 at 3237.509 kb on + strand, within IAI46_15465 at 3237.510 kb on - strand, within IAI46_15465 at 3237.510 kb on - strand, within IAI46_15465 at 3237.576 kb on - strand, within IAI46_15465 at 3237.576 kb on - strand, within IAI46_15465 at 3237.788 kb on + strand at 3237.924 kb on + strand, within IAI46_15470 at 3237.928 kb on + strand, within IAI46_15470 at 3237.929 kb on - strand, within IAI46_15470 at 3237.929 kb on - strand, within IAI46_15470 at 3237.929 kb on - strand, within IAI46_15470 at 3237.970 kb on + strand, within IAI46_15470 at 3237.970 kb on + strand, within IAI46_15470 at 3237.971 kb on - strand, within IAI46_15470 at 3237.971 kb on - strand, within IAI46_15470 at 3238.005 kb on - strand, within IAI46_15470 at 3238.111 kb on + strand, within IAI46_15470 at 3238.111 kb on + strand, within IAI46_15470 at 3238.111 kb on + strand, within IAI46_15470 at 3238.111 kb on + strand, within IAI46_15470 at 3238.351 kb on + strand, within IAI46_15470 at 3238.402 kb on - strand, within IAI46_15470 at 3238.430 kb on - strand, within IAI46_15470 at 3238.469 kb on - strand, within IAI46_15470 at 3238.474 kb on + strand, within IAI46_15470 at 3238.755 kb on - strand at 3238.772 kb on - strand at 3238.772 kb on - strand at 3238.776 kb on - strand at 3238.887 kb on + strand at 3238.887 kb on + strand at 3238.888 kb on - strand at 3238.888 kb on - strand at 3238.889 kb on + strand at 3238.915 kb on - strand at 3238.978 kb on - strand at 3239.000 kb on + strand at 3239.028 kb on + strand at 3239.078 kb on + strand at 3239.144 kb on + strand at 3239.145 kb on - strand at 3239.145 kb on - strand at 3239.145 kb on - strand at 3239.145 kb on - strand at 3239.372 kb on - strand, within IAI46_15475 at 3239.374 kb on + strand, within IAI46_15475 at 3239.417 kb on + strand, within IAI46_15475 at 3239.585 kb on + strand, within IAI46_15475 at 3239.644 kb on + strand, within IAI46_15475 at 3239.644 kb on + strand, within IAI46_15475 at 3239.645 kb on - strand, within IAI46_15475 at 3239.712 kb on - strand, within IAI46_15475 at 3239.737 kb on + strand, within IAI46_15475 at 3239.737 kb on + strand, within IAI46_15475 at 3239.747 kb on + strand, within IAI46_15475 at 3239.748 kb on - strand, within IAI46_15475
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 3,236,893 + IAI46_15465 0.13 -0.4 3,236,894 - IAI46_15465 0.13 -0.3 3,236,909 + IAI46_15465 0.14 -0.2 3,236,909 + IAI46_15465 0.14 +0.3 3,236,909 + IAI46_15465 0.14 +0.3 3,236,983 - IAI46_15465 0.22 +0.6 3,237,011 - IAI46_15465 0.24 +0.9 3,237,011 - IAI46_15465 0.24 -0.2 3,237,011 - IAI46_15465 0.24 -1.4 3,237,292 + IAI46_15465 0.52 -0.8 3,237,293 - IAI46_15465 0.52 +1.2 3,237,329 + IAI46_15465 0.56 -0.1 3,237,329 + IAI46_15465 0.56 -0.2 3,237,330 - IAI46_15465 0.56 -0.9 3,237,361 + IAI46_15465 0.59 +0.8 3,237,509 + IAI46_15465 0.73 +1.0 3,237,509 + IAI46_15465 0.73 +0.4 3,237,510 - IAI46_15465 0.73 -1.4 3,237,510 - IAI46_15465 0.73 +0.5 3,237,576 - IAI46_15465 0.80 -0.0 3,237,576 - IAI46_15465 0.80 -0.2 3,237,788 + -1.2 3,237,924 + IAI46_15470 0.15 +0.4 3,237,928 + IAI46_15470 0.15 -1.3 3,237,929 - IAI46_15470 0.15 -1.4 3,237,929 - IAI46_15470 0.15 -0.1 3,237,929 - IAI46_15470 0.15 -1.5 3,237,970 + IAI46_15470 0.19 +0.6 3,237,970 + IAI46_15470 0.19 -0.8 3,237,971 - IAI46_15470 0.19 +1.4 3,237,971 - IAI46_15470 0.19 +0.2 3,238,005 - IAI46_15470 0.23 -0.0 3,238,111 + IAI46_15470 0.33 -0.2 3,238,111 + IAI46_15470 0.33 -0.3 3,238,111 + IAI46_15470 0.33 -0.2 3,238,111 + IAI46_15470 0.33 -0.7 3,238,351 + IAI46_15470 0.57 -0.5 3,238,402 - IAI46_15470 0.62 +0.1 3,238,430 - IAI46_15470 0.65 +0.2 3,238,469 - IAI46_15470 0.69 +0.3 3,238,474 + IAI46_15470 0.69 +0.8 3,238,755 - +0.3 3,238,772 - -0.0 3,238,772 - +0.2 3,238,776 - -0.8 3,238,887 + -0.1 3,238,887 + +1.6 3,238,888 - +0.7 3,238,888 - +0.2 3,238,889 + -0.3 3,238,915 - -0.2 3,238,978 - +0.4 3,239,000 + +0.7 3,239,028 + -0.6 3,239,078 + +0.7 3,239,144 + +0.2 3,239,145 - +1.0 3,239,145 - +0.3 3,239,145 - -0.3 3,239,145 - +0.2 3,239,372 - IAI46_15475 0.24 +0.4 3,239,374 + IAI46_15475 0.24 +0.6 3,239,417 + IAI46_15475 0.31 -1.8 3,239,585 + IAI46_15475 0.59 +0.3 3,239,644 + IAI46_15475 0.68 -0.2 3,239,644 + IAI46_15475 0.68 -0.2 3,239,645 - IAI46_15475 0.69 +0.2 3,239,712 - IAI46_15475 0.80 -1.4 3,239,737 + IAI46_15475 0.84 +0.4 3,239,737 + IAI46_15475 0.84 -0.8 3,239,747 + IAI46_15475 0.85 -0.6 3,239,748 - IAI46_15475 0.85 -0.4
Or see this region's nucleotide sequence