Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14030 and IAI46_14035 are separated by 3 nucleotides IAI46_14035 and IAI46_14040 are separated by 31 nucleotides
IAI46_14030: IAI46_14030 - anthranilate phosphoribosyltransferase, at 2,979,446 to 2,980,444
_14030
IAI46_14035: IAI46_14035 - bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF, at 2,980,448 to 2,981,809
_14035
IAI46_14040: IAI46_14040 - tryptophan synthase subunit beta, at 2,981,841 to 2,983,031
_14040
Position (kb)
2980
2981
2982 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2979.470 kb on + strand at 2979.659 kb on + strand, within IAI46_14030 at 2979.709 kb on + strand, within IAI46_14030 at 2979.710 kb on - strand, within IAI46_14030 at 2979.882 kb on + strand, within IAI46_14030 at 2979.937 kb on - strand, within IAI46_14030 at 2979.973 kb on - strand, within IAI46_14030 at 2980.027 kb on + strand, within IAI46_14030 at 2980.283 kb on - strand, within IAI46_14030 at 2980.442 kb on + strand at 2980.801 kb on + strand, within IAI46_14035 at 2980.835 kb on + strand, within IAI46_14035 at 2981.108 kb on + strand, within IAI46_14035 at 2981.166 kb on + strand, within IAI46_14035 at 2981.318 kb on + strand, within IAI46_14035 at 2981.379 kb on + strand, within IAI46_14035 at 2981.471 kb on + strand, within IAI46_14035 at 2981.472 kb on - strand, within IAI46_14035 at 2981.472 kb on - strand, within IAI46_14035 at 2981.474 kb on - strand, within IAI46_14035 at 2981.728 kb on + strand at 2981.807 kb on + strand at 2981.852 kb on + strand at 2981.860 kb on - strand at 2981.883 kb on + strand at 2981.883 kb on + strand at 2981.884 kb on - strand at 2982.057 kb on + strand, within IAI46_14040 at 2982.234 kb on + strand, within IAI46_14040 at 2982.235 kb on - strand, within IAI46_14040 at 2982.378 kb on + strand, within IAI46_14040 at 2982.379 kb on - strand, within IAI46_14040 at 2982.393 kb on + strand, within IAI46_14040 at 2982.393 kb on + strand, within IAI46_14040 at 2982.393 kb on + strand, within IAI46_14040 at 2982.394 kb on - strand, within IAI46_14040 at 2982.394 kb on - strand, within IAI46_14040 at 2982.395 kb on + strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.396 kb on - strand, within IAI46_14040 at 2982.555 kb on - strand, within IAI46_14040 at 2982.780 kb on + strand, within IAI46_14040 at 2982.781 kb on - strand, within IAI46_14040 at 2982.807 kb on + strand, within IAI46_14040
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 2,979,470 + -0.8 2,979,659 + IAI46_14030 0.21 -0.1 2,979,709 + IAI46_14030 0.26 +0.5 2,979,710 - IAI46_14030 0.26 +0.0 2,979,882 + IAI46_14030 0.44 -0.3 2,979,937 - IAI46_14030 0.49 -0.6 2,979,973 - IAI46_14030 0.53 +0.8 2,980,027 + IAI46_14030 0.58 +0.5 2,980,283 - IAI46_14030 0.84 -0.5 2,980,442 + -0.1 2,980,801 + IAI46_14035 0.26 +1.5 2,980,835 + IAI46_14035 0.28 +0.1 2,981,108 + IAI46_14035 0.48 -0.7 2,981,166 + IAI46_14035 0.53 +1.0 2,981,318 + IAI46_14035 0.64 +0.8 2,981,379 + IAI46_14035 0.68 -0.7 2,981,471 + IAI46_14035 0.75 -1.1 2,981,472 - IAI46_14035 0.75 -1.6 2,981,472 - IAI46_14035 0.75 -1.3 2,981,474 - IAI46_14035 0.75 +0.5 2,981,728 + +0.4 2,981,807 + +0.7 2,981,852 + +0.1 2,981,860 - +0.7 2,981,883 + +0.7 2,981,883 + +0.1 2,981,884 - +1.5 2,982,057 + IAI46_14040 0.18 +1.2 2,982,234 + IAI46_14040 0.33 +1.3 2,982,235 - IAI46_14040 0.33 -0.1 2,982,378 + IAI46_14040 0.45 +0.2 2,982,379 - IAI46_14040 0.45 +0.5 2,982,393 + IAI46_14040 0.46 +1.4 2,982,393 + IAI46_14040 0.46 +1.8 2,982,393 + IAI46_14040 0.46 +2.0 2,982,394 - IAI46_14040 0.46 -2.4 2,982,394 - IAI46_14040 0.46 -1.7 2,982,395 + IAI46_14040 0.47 +0.0 2,982,396 - IAI46_14040 0.47 +0.8 2,982,396 - IAI46_14040 0.47 -1.2 2,982,396 - IAI46_14040 0.47 +0.1 2,982,396 - IAI46_14040 0.47 -0.1 2,982,555 - IAI46_14040 0.60 +0.8 2,982,780 + IAI46_14040 0.79 -0.3 2,982,781 - IAI46_14040 0.79 +0.4 2,982,807 + IAI46_14040 0.81 -0.9
Or see this region's nucleotide sequence