Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02615 and IAI46_02620 are separated by 143 nucleotides IAI46_02620 and IAI46_02625 overlap by 8 nucleotides IAI46_02625 and IAI46_02630 are separated by 102 nucleotides
IAI46_02615: IAI46_02615 - TonB-dependent receptor, at 562,480 to 564,720
_02615
IAI46_02620: IAI46_02620 - MotA/TolQ/ExbB proton channel family protein, at 564,864 to 565,514
_02620
IAI46_02625: IAI46_02625 - phospholipase, at 565,507 to 566,757
_02625
IAI46_02630: IAI46_02630 - P1 family peptidase, at 566,860 to 567,966
_02630
Position (kb) 565
566
567 Strain fitness (log2 ratio) -2
-1
0
1
2 at 564.595 kb on + strand at 564.595 kb on + strand at 564.637 kb on + strand at 564.637 kb on + strand at 564.637 kb on + strand at 564.638 kb on - strand at 564.638 kb on - strand at 564.640 kb on - strand at 564.647 kb on + strand at 564.664 kb on + strand at 564.665 kb on - strand at 564.667 kb on + strand at 564.667 kb on + strand at 564.667 kb on + strand at 564.667 kb on + strand at 564.667 kb on + strand at 564.667 kb on + strand at 564.668 kb on - strand at 564.668 kb on - strand at 564.688 kb on - strand at 564.698 kb on + strand at 564.718 kb on + strand at 564.722 kb on + strand at 564.723 kb on - strand at 564.723 kb on - strand at 564.723 kb on - strand at 564.723 kb on - strand at 564.726 kb on + strand at 564.726 kb on + strand at 564.726 kb on + strand at 564.726 kb on + strand at 564.727 kb on - strand at 564.727 kb on - strand at 564.727 kb on - strand at 564.727 kb on - strand at 564.727 kb on - strand at 564.727 kb on - strand at 564.727 kb on - strand at 564.728 kb on + strand at 564.733 kb on + strand at 564.733 kb on + strand at 564.734 kb on - strand at 564.784 kb on + strand at 564.784 kb on + strand at 564.784 kb on + strand at 564.784 kb on + strand at 564.784 kb on + strand at 564.785 kb on - strand at 564.785 kb on - strand at 564.788 kb on + strand at 564.788 kb on + strand at 564.788 kb on + strand at 564.788 kb on + strand at 564.788 kb on + strand at 564.788 kb on + strand at 564.789 kb on - strand at 564.792 kb on + strand at 564.792 kb on + strand at 564.792 kb on + strand at 564.792 kb on + strand at 564.792 kb on + strand at 564.793 kb on - strand at 564.796 kb on + strand at 564.796 kb on + strand at 564.797 kb on - strand at 564.797 kb on - strand at 564.849 kb on + strand at 564.850 kb on - strand at 564.890 kb on + strand at 564.891 kb on - strand at 564.898 kb on - strand at 564.906 kb on + strand at 564.906 kb on + strand at 564.907 kb on - strand at 564.939 kb on - strand, within IAI46_02620 at 564.947 kb on + strand, within IAI46_02620 at 564.947 kb on + strand, within IAI46_02620 at 564.947 kb on + strand, within IAI46_02620 at 564.954 kb on + strand, within IAI46_02620 at 564.963 kb on + strand, within IAI46_02620 at 564.964 kb on - strand, within IAI46_02620 at 564.964 kb on - strand, within IAI46_02620 at 564.965 kb on + strand, within IAI46_02620 at 564.966 kb on - strand, within IAI46_02620 at 565.146 kb on + strand, within IAI46_02620 at 565.146 kb on + strand, within IAI46_02620 at 565.196 kb on + strand, within IAI46_02620 at 565.196 kb on + strand, within IAI46_02620 at 565.196 kb on + strand, within IAI46_02620 at 565.233 kb on - strand, within IAI46_02620 at 565.326 kb on + strand, within IAI46_02620 at 565.327 kb on - strand, within IAI46_02620 at 565.343 kb on + strand, within IAI46_02620 at 565.407 kb on - strand, within IAI46_02620 at 565.512 kb on + strand at 565.513 kb on - strand at 565.539 kb on - strand at 565.539 kb on - strand at 565.549 kb on + strand at 565.634 kb on - strand, within IAI46_02625 at 565.634 kb on - strand, within IAI46_02625 at 565.634 kb on - strand, within IAI46_02625 at 565.634 kb on - strand, within IAI46_02625 at 565.744 kb on + strand, within IAI46_02625 at 565.744 kb on + strand, within IAI46_02625 at 565.744 kb on + strand, within IAI46_02625 at 565.860 kb on + strand, within IAI46_02625 at 565.860 kb on + strand, within IAI46_02625 at 565.861 kb on - strand, within IAI46_02625 at 565.861 kb on - strand, within IAI46_02625 at 565.884 kb on + strand, within IAI46_02625 at 565.911 kb on + strand, within IAI46_02625 at 565.912 kb on - strand, within IAI46_02625 at 565.912 kb on - strand, within IAI46_02625 at 565.912 kb on - strand, within IAI46_02625 at 565.921 kb on + strand, within IAI46_02625 at 565.957 kb on + strand, within IAI46_02625 at 566.162 kb on + strand, within IAI46_02625 at 566.162 kb on + strand, within IAI46_02625 at 566.162 kb on + strand, within IAI46_02625 at 566.182 kb on + strand, within IAI46_02625 at 566.182 kb on + strand, within IAI46_02625 at 566.207 kb on - strand, within IAI46_02625 at 566.282 kb on + strand, within IAI46_02625 at 566.282 kb on + strand, within IAI46_02625 at 566.297 kb on - strand, within IAI46_02625 at 566.336 kb on - strand, within IAI46_02625 at 566.338 kb on + strand, within IAI46_02625 at 566.339 kb on - strand, within IAI46_02625 at 566.339 kb on - strand, within IAI46_02625 at 566.415 kb on + strand, within IAI46_02625 at 566.599 kb on + strand, within IAI46_02625 at 566.617 kb on - strand, within IAI46_02625 at 566.671 kb on + strand at 566.671 kb on + strand at 566.672 kb on - strand at 566.695 kb on + strand at 566.696 kb on - strand at 566.827 kb on + strand at 566.828 kb on - strand at 566.828 kb on - strand at 566.861 kb on + strand at 566.971 kb on - strand, within IAI46_02630 at 567.020 kb on + strand, within IAI46_02630 at 567.021 kb on - strand, within IAI46_02630 at 567.052 kb on - strand, within IAI46_02630 at 567.052 kb on - strand, within IAI46_02630 at 567.052 kb on - strand, within IAI46_02630 at 567.071 kb on + strand, within IAI46_02630 at 567.071 kb on + strand, within IAI46_02630 at 567.071 kb on + strand, within IAI46_02630 at 567.288 kb on + strand, within IAI46_02630 at 567.288 kb on + strand, within IAI46_02630 at 567.288 kb on + strand, within IAI46_02630 at 567.288 kb on + strand, within IAI46_02630 at 567.289 kb on - strand, within IAI46_02630 at 567.577 kb on + strand, within IAI46_02630 at 567.577 kb on + strand, within IAI46_02630 at 567.589 kb on - strand, within IAI46_02630 at 567.589 kb on - strand, within IAI46_02630 at 567.596 kb on + strand, within IAI46_02630 at 567.597 kb on - strand, within IAI46_02630 at 567.597 kb on - strand, within IAI46_02630
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 564,595 + +0.6 564,595 + -0.9 564,637 + -0.8 564,637 + +0.9 564,637 + +1.0 564,638 - +0.3 564,638 - -0.9 564,640 - -0.3 564,647 + +0.0 564,664 + +0.3 564,665 - +0.1 564,667 + -0.0 564,667 + +0.2 564,667 + -0.7 564,667 + -1.2 564,667 + +0.6 564,667 + +0.2 564,668 - +0.6 564,668 - -1.1 564,688 - +1.0 564,698 + +0.5 564,718 + -0.3 564,722 + +0.1 564,723 - +0.2 564,723 - +0.4 564,723 - +0.1 564,723 - +0.4 564,726 + -0.1 564,726 + +0.0 564,726 + -0.2 564,726 + -0.3 564,727 - +0.1 564,727 - +0.0 564,727 - -0.7 564,727 - +0.2 564,727 - -0.4 564,727 - -0.2 564,727 - +0.0 564,728 + +0.3 564,733 + -0.5 564,733 + +0.9 564,734 - +0.4 564,784 + -1.1 564,784 + +2.0 564,784 + +0.6 564,784 + +1.2 564,784 + -1.3 564,785 - -0.3 564,785 - +0.5 564,788 + +0.4 564,788 + +0.6 564,788 + -0.4 564,788 + -1.3 564,788 + -0.7 564,788 + -0.0 564,789 - +0.3 564,792 + +0.7 564,792 + -0.4 564,792 + -0.7 564,792 + +1.2 564,792 + +0.2 564,793 - -0.8 564,796 + -0.9 564,796 + -0.6 564,797 - +1.2 564,797 - -0.5 564,849 + -0.5 564,850 - -0.9 564,890 + +1.2 564,891 - -0.0 564,898 - +0.0 564,906 + -0.4 564,906 + -0.4 564,907 - -0.1 564,939 - IAI46_02620 0.12 +0.7 564,947 + IAI46_02620 0.13 -0.1 564,947 + IAI46_02620 0.13 +0.4 564,947 + IAI46_02620 0.13 -0.1 564,954 + IAI46_02620 0.14 +1.2 564,963 + IAI46_02620 0.15 +0.2 564,964 - IAI46_02620 0.15 +0.5 564,964 - IAI46_02620 0.15 +1.2 564,965 + IAI46_02620 0.16 +0.7 564,966 - IAI46_02620 0.16 +0.0 565,146 + IAI46_02620 0.43 +1.0 565,146 + IAI46_02620 0.43 +0.1 565,196 + IAI46_02620 0.51 +1.1 565,196 + IAI46_02620 0.51 -1.2 565,196 + IAI46_02620 0.51 -0.8 565,233 - IAI46_02620 0.57 +0.1 565,326 + IAI46_02620 0.71 -0.1 565,327 - IAI46_02620 0.71 +1.1 565,343 + IAI46_02620 0.74 +1.3 565,407 - IAI46_02620 0.83 -0.2 565,512 + +0.6 565,513 - +0.0 565,539 - -1.0 565,539 - -0.1 565,549 + +0.8 565,634 - IAI46_02625 0.10 -2.2 565,634 - IAI46_02625 0.10 +0.6 565,634 - IAI46_02625 0.10 -0.6 565,634 - IAI46_02625 0.10 +0.2 565,744 + IAI46_02625 0.19 +0.6 565,744 + IAI46_02625 0.19 +0.4 565,744 + IAI46_02625 0.19 +0.1 565,860 + IAI46_02625 0.28 +1.2 565,860 + IAI46_02625 0.28 -0.0 565,861 - IAI46_02625 0.28 +0.8 565,861 - IAI46_02625 0.28 +0.8 565,884 + IAI46_02625 0.30 -1.3 565,911 + IAI46_02625 0.32 -0.6 565,912 - IAI46_02625 0.32 +0.3 565,912 - IAI46_02625 0.32 -1.0 565,912 - IAI46_02625 0.32 +0.4 565,921 + IAI46_02625 0.33 +0.6 565,957 + IAI46_02625 0.36 +0.3 566,162 + IAI46_02625 0.52 +1.2 566,162 + IAI46_02625 0.52 +0.2 566,162 + IAI46_02625 0.52 +0.2 566,182 + IAI46_02625 0.54 -0.5 566,182 + IAI46_02625 0.54 -1.0 566,207 - IAI46_02625 0.56 -1.9 566,282 + IAI46_02625 0.62 -0.1 566,282 + IAI46_02625 0.62 -0.9 566,297 - IAI46_02625 0.63 -0.2 566,336 - IAI46_02625 0.66 +0.2 566,338 + IAI46_02625 0.66 -0.3 566,339 - IAI46_02625 0.67 +0.2 566,339 - IAI46_02625 0.67 -1.2 566,415 + IAI46_02625 0.73 +0.2 566,599 + IAI46_02625 0.87 -0.2 566,617 - IAI46_02625 0.89 -1.6 566,671 + +0.2 566,671 + +0.1 566,672 - -0.4 566,695 + +0.1 566,696 - +0.6 566,827 + +1.0 566,828 - +0.7 566,828 - +0.2 566,861 + +0.9 566,971 - IAI46_02630 0.10 -0.1 567,020 + IAI46_02630 0.14 -0.5 567,021 - IAI46_02630 0.15 -0.2 567,052 - IAI46_02630 0.17 -0.6 567,052 - IAI46_02630 0.17 -1.5 567,052 - IAI46_02630 0.17 -0.6 567,071 + IAI46_02630 0.19 +1.0 567,071 + IAI46_02630 0.19 -1.3 567,071 + IAI46_02630 0.19 +0.0 567,288 + IAI46_02630 0.39 +0.2 567,288 + IAI46_02630 0.39 +0.2 567,288 + IAI46_02630 0.39 +0.2 567,288 + IAI46_02630 0.39 -1.6 567,289 - IAI46_02630 0.39 +0.0 567,577 + IAI46_02630 0.65 -0.1 567,577 + IAI46_02630 0.65 -0.3 567,589 - IAI46_02630 0.66 -0.6 567,589 - IAI46_02630 0.66 -0.2 567,596 + IAI46_02630 0.66 +0.5 567,597 - IAI46_02630 0.67 +0.2 567,597 - IAI46_02630 0.67 +0.8
Or see this region's nucleotide sequence