Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01910 and IAI46_01915 are separated by 77 nucleotides IAI46_01915 and IAI46_01920 are separated by 60 nucleotides IAI46_01920 and IAI46_01925 are separated by 217 nucleotides IAI46_01925 and IAI46_01930 are separated by 21 nucleotides
IAI46_01910: IAI46_01910 - preprotein translocase subunit SecG, at 410,976 to 411,311
_01910
IAI46_01915: IAI46_01915 - tRNA-Leu, at 411,389 to 411,475
_01915
IAI46_01920: IAI46_01920 - tRNA-Met, at 411,536 to 411,612
_01920
IAI46_01925: IAI46_01925 - ribosome maturation factor RimP, at 411,830 to 412,282
_01925
IAI46_01930: IAI46_01930 - transcription termination/antitermination protein NusA, at 412,304 to 413,812
_01930
Position (kb) 411
412
413 Strain fitness (log2 ratio) -1
0
1 at 410.885 kb on + strand at 410.885 kb on + strand at 410.887 kb on + strand at 410.887 kb on + strand at 410.887 kb on + strand at 410.907 kb on + strand at 410.913 kb on + strand at 410.913 kb on + strand at 410.969 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 411.035 kb on + strand, within IAI46_01910 at 411.035 kb on + strand, within IAI46_01910 at 411.323 kb on + strand at 411.346 kb on + strand at 411.349 kb on + strand at 411.357 kb on + strand at 411.357 kb on + strand at 411.488 kb on - strand at 411.517 kb on + strand at 412.100 kb on + strand, within IAI46_01925
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 410,885 + +0.9 410,885 + -0.7 410,887 + -0.8 410,887 + -0.7 410,887 + -0.4 410,907 + +0.4 410,913 + -1.0 410,913 + +0.3 410,969 + -0.5 410,975 + -0.1 410,975 + -0.4 410,975 + -0.8 410,975 + +1.1 410,975 + -0.5 410,975 + -0.0 411,035 + IAI46_01910 0.18 +0.2 411,035 + IAI46_01910 0.18 +0.8 411,323 + +0.3 411,346 + +0.1 411,349 + +0.2 411,357 + +0.2 411,357 + +0.7 411,488 - -0.6 411,517 + -0.1 412,100 + IAI46_01925 0.60 +1.2
Or see this region's nucleotide sequence